Protein–RNA interactions for Protein: P49917

LIG4, DNA ligase 4, humanhuman

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4P49917 MIR92A1-201ENST00000385233 78 ntBASIC0.62□□□□□ -2.31
LIG4P49917 SNORD12C-201ENST00000386307 89 ntBASIC0.62□□□□□ -2.31
LIG4P49917 SCARNA15.1-201ENST00000516384 125 ntBASIC0.62□□□□□ -2.31
LIG4P49917 AC022709.1-201ENST00000615967 87 ntBASIC0.62□□□□□ -2.31
LIG4P49917 RNU1-133P-201ENST00000364867 167 ntBASIC0.61□□□□□ -2.31
LIG4P49917 Y_RNA.562-201ENST00000384695 113 ntBASIC0.61□□□□□ -2.31
LIG4P49917 MIR613-201ENST00000385248 95 ntBASIC0.61□□□□□ -2.31
LIG4P49917 Y_RNA.618-201ENST00000410949 107 ntBASIC0.61□□□□□ -2.31
LIG4P49917 AL121914.1-201ENST00000450188 156 ntBASIC0.61□□□□□ -2.31
LIG4P49917 RNU7-56P-201ENST00000458744 62 ntBASIC0.61□□□□□ -2.31
LIG4P49917 RNU7-45P-201ENST00000459460 63 ntBASIC0.61□□□□□ -2.31
LIG4P49917 RNU4-54P-201ENST00000516428 129 ntBASIC0.61□□□□□ -2.31
LIG4P49917 AC004817.2-201ENST00000561794 651 ntBASIC0.61□□□□□ -2.31
LIG4P49917 MIR4744-201ENST00000581563 82 ntBASIC0.61□□□□□ -2.31
LIG4P49917 MIR6717-201ENST00000622747 73 ntBASIC0.61□□□□□ -2.31
LIG4P49917 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
LIG4P49917 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.6□□□□□ -2.31
LIG4P49917 RNU6-1292P-201ENST00000383856 107 ntBASIC0.6□□□□□ -2.31
LIG4P49917 RNU6-945P-201ENST00000383947 107 ntBASIC0.6□□□□□ -2.31
LIG4P49917 RNY1P8-201ENST00000383970 114 ntBASIC0.6□□□□□ -2.31
LIG4P49917 MIR563-201ENST00000385080 79 ntBASIC0.6□□□□□ -2.31
LIG4P49917 SNORA26.6-201ENST00000391256 115 ntBASIC0.6□□□□□ -2.31
LIG4P49917 MIR938-201ENST00000401216 83 ntBASIC0.6□□□□□ -2.31
LIG4P49917 RNU6-733P-201ENST00000410759 104 ntBASIC0.6□□□□□ -2.31
LIG4P49917 RNU6-177P-201ENST00000411257 104 ntBASIC0.6□□□□□ -2.31
LIG4P49917 RNU7-80P-201ENST00000459562 61 ntBASIC0.6□□□□□ -2.31
LIG4P49917 RNY3P16-201ENST00000516338 101 ntBASIC0.6□□□□□ -2.31
LIG4P49917 RNA5SP121-201ENST00000516537 101 ntBASIC0.6□□□□□ -2.31
LIG4P49917 AL365205.2-201ENST00000594586 68 ntBASIC0.6□□□□□ -2.31
LIG4P49917 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
LIG4P49917 RNA5SP347-201ENST00000362445 119 ntBASIC0.59□□□□□ -2.31
LIG4P49917 Y_RNA.308-201ENST00000365043 101 ntBASIC0.59□□□□□ -2.31
LIG4P49917 RNY4P28-201ENST00000365281 93 ntBASIC0.59□□□□□ -2.31
LIG4P49917 Y_RNA.354-201ENST00000365448 111 ntBASIC0.59□□□□□ -2.31
LIG4P49917 Y_RNA.539-201ENST00000384635 107 ntBASIC0.59□□□□□ -2.31
LIG4P49917 MIR489-201ENST00000384923 84 ntBASIC0.59□□□□□ -2.31
LIG4P49917 SNORD58.1-201ENST00000391313 66 ntBASIC0.59□□□□□ -2.31
LIG4P49917 RNA5SP261-201ENST00000410536 106 ntBASIC0.59□□□□□ -2.31
LIG4P49917 MTCYBP9-201ENST00000431021 303 ntBASIC0.59□□□□□ -2.31
LIG4P49917 RNU6-1132P-201ENST00000459214 107 ntBASIC0.59□□□□□ -2.31
LIG4P49917 RNU7-185P-201ENST00000459215 60 ntBASIC0.59□□□□□ -2.31
LIG4P49917 Y_RNA.680-201ENST00000516441 93 ntBASIC0.59□□□□□ -2.31
LIG4P49917 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.59□□□□□ -2.31
LIG4P49917 AC018659.1-201ENST00000551083 169 ntBASIC0.59□□□□□ -2.31
LIG4P49917 MIR3612-201ENST00000579753 87 ntBASIC0.59□□□□□ -2.31
LIG4P49917 AC091932.4-201ENST00000623386 200 ntBASIC0.59□□□□□ -2.31
LIG4P49917 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.59□□□□□ -2.31
LIG4P49917 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
LIG4P49917 SNORD27-201ENST00000363981 72 ntBASIC0.58□□□□□ -2.32
LIG4P49917 Y_RNA.454-201ENST00000384224 113 ntBASIC0.58□□□□□ -2.32
LIG4P49917 Y_RNA.556-201ENST00000384677 113 ntBASIC0.58□□□□□ -2.32
LIG4P49917 RNU6-493P-201ENST00000391321 108 ntBASIC0.58□□□□□ -2.32
LIG4P49917 MIR1257-201ENST00000408490 117 ntBASIC0.58□□□□□ -2.32
LIG4P49917 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC0.58□□□□□ -2.32
LIG4P49917 Y_RNA.668-201ENST00000516233 93 ntBASIC0.58□□□□□ -2.32
LIG4P49917 RNU6-327P-201ENST00000516270 127 ntBASIC0.58□□□□□ -2.32
LIG4P49917 AL596211.1-201ENST00000569873 2277 ntBASIC0.58□□□□□ -2.32
LIG4P49917 MIR30D-201ENST00000362283 70 ntBASIC0.57□□□□□ -2.32
LIG4P49917 MIR18A-201ENST00000362310 71 ntBASIC0.57□□□□□ -2.32
LIG4P49917 RNA5SP499-201ENST00000363982 119 ntBASIC0.57□□□□□ -2.32
LIG4P49917 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
LIG4P49917 RNU6-364P-201ENST00000384387 107 ntBASIC0.57□□□□□ -2.32
LIG4P49917 MIR598-201ENST00000384868 97 ntBASIC0.57□□□□□ -2.32
LIG4P49917 MIR125B2-201ENST00000385128 89 ntBASIC0.57□□□□□ -2.32
LIG4P49917 MIR140-201ENST00000385282 100 ntBASIC0.57□□□□□ -2.32
LIG4P49917 MT-TF-201ENST00000387314 71 ntBASIC0.57□□□□□ -2.32
LIG4P49917 RNU6-578P-201ENST00000390980 103 ntBASIC0.57□□□□□ -2.32
LIG4P49917 MTND2P23-201ENST00000422990 651 ntBASIC0.57□□□□□ -2.32
LIG4P49917 SEPT7P4-201ENST00000437076 306 ntBASIC0.57□□□□□ -2.32
LIG4P49917 Z83818.1-201ENST00000603584 150 ntBASIC0.57□□□□□ -2.32
LIG4P49917 RNU2-4P-201ENST00000606190 192 ntBASIC0.57□□□□□ -2.32
LIG4P49917 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.57□□□□□ -2.32
LIG4P49917 uc_338.17-201ENST00000619633 179 ntBASIC0.57□□□□□ -2.32
LIG4P49917 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
LIG4P49917 RNU6-1237P-201ENST00000384777 107 ntBASIC0.56□□□□□ -2.32
LIG4P49917 MIR1302-3-201ENST00000408128 138 ntBASIC0.56□□□□□ -2.32
LIG4P49917 SNORD116-25-201ENST00000516517 92 ntBASIC0.56□□□□□ -2.32
LIG4P49917 MIR378D2-201ENST00000580636 98 ntBASIC0.56□□□□□ -2.32
LIG4P49917 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.56□□□□□ -2.32
LIG4P49917 MIR6513-201ENST00000621188 64 ntBASIC0.56□□□□□ -2.32
LIG4P49917 AC099654.10-201ENST00000640395 161 ntBASIC0.56□□□□□ -2.32
LIG4P49917 Y_RNA.65-201ENST00000362846 100 ntBASIC0.55□□□□□ -2.32
LIG4P49917 RNU4-45P-201ENST00000365469 141 ntBASIC0.55□□□□□ -2.32
LIG4P49917 Y_RNA.477-201ENST00000384352 108 ntBASIC0.55□□□□□ -2.32
LIG4P49917 RNU6-1319P-201ENST00000390855 104 ntBASIC0.55□□□□□ -2.32
LIG4P49917 RNU6-747P-201ENST00000390928 104 ntBASIC0.55□□□□□ -2.32
LIG4P49917 RNU6-241P-201ENST00000391148 104 ntBASIC0.55□□□□□ -2.32
LIG4P49917 RNU6-447P-201ENST00000410293 104 ntBASIC0.55□□□□□ -2.32
LIG4P49917 RNU6-1118P-201ENST00000410382 104 ntBASIC0.55□□□□□ -2.32
LIG4P49917 RNU6-1076P-201ENST00000410397 104 ntBASIC0.55□□□□□ -2.32
LIG4P49917 RNU6-355P-201ENST00000410427 104 ntBASIC0.55□□□□□ -2.32
LIG4P49917 RNU6-791P-201ENST00000410467 104 ntBASIC0.55□□□□□ -2.32
LIG4P49917 RNU6-705P-201ENST00000410601 104 ntBASIC0.55□□□□□ -2.32
LIG4P49917 RNU6-1100P-201ENST00000410691 104 ntBASIC0.55□□□□□ -2.32
LIG4P49917 RNU6-860P-201ENST00000410860 104 ntBASIC0.55□□□□□ -2.32
LIG4P49917 RNU6-1217P-201ENST00000411276 104 ntBASIC0.55□□□□□ -2.32
LIG4P49917 RNU6-785P-201ENST00000411324 104 ntBASIC0.55□□□□□ -2.32
LIG4P49917 AC098934.3-201ENST00000430450 190 ntBASIC0.55□□□□□ -2.32
LIG4P49917 AC092628.1-201ENST00000436250 252 ntBASIC0.55□□□□□ -2.32
LIG4P49917 RNU7-102P-201ENST00000458948 62 ntBASIC0.55□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 236 ms