Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AC006461.1-201ENST00000412637 326 ntBASIC0.86□□□□□ -2.27
CDH3P22223 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.86□□□□□ -2.27
CDH3P22223 Y_RNA.644-201ENST00000459006 113 ntBASIC0.86□□□□□ -2.27
CDH3P22223 PDCD5P2-201ENST00000507570 312 ntBASIC0.86□□□□□ -2.27
CDH3P22223 Y_RNA.674-201ENST00000516362 113 ntBASIC0.86□□□□□ -2.27
CDH3P22223 MIR4698-201ENST00000577795 80 ntBASIC0.86□□□□□ -2.27
CDH3P22223 MIR4431-201ENST00000579990 94 ntBASIC0.86□□□□□ -2.27
CDH3P22223 Y_RNA.351-201ENST00000365436 96 ntBASIC0.85□□□□□ -2.27
CDH3P22223 SEPT7P4-201ENST00000437076 306 ntBASIC0.85□□□□□ -2.27
CDH3P22223 RNU6-138P-201ENST00000515952 107 ntBASIC0.85□□□□□ -2.27
CDH3P22223 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.85□□□□□ -2.27
CDH3P22223 MIR3973-201ENST00000579824 107 ntBASIC0.85□□□□□ -2.27
CDH3P22223 MIR4264-201ENST00000583520 66 ntBASIC0.85□□□□□ -2.27
CDH3P22223 AC013244.2-201ENST00000603396 103 ntBASIC0.85□□□□□ -2.27
CDH3P22223 RNU6-200P-201ENST00000364743 107 ntBASIC0.84□□□□□ -2.27
CDH3P22223 RNU6-1336P-201ENST00000383886 109 ntBASIC0.84□□□□□ -2.27
CDH3P22223 MIR624-201ENST00000385217 97 ntBASIC0.84□□□□□ -2.27
CDH3P22223 SNORA26.6-201ENST00000391256 115 ntBASIC0.84□□□□□ -2.27
CDH3P22223 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.84□□□□□ -2.27
CDH3P22223 RNA5SP127-201ENST00000411051 133 ntBASIC0.84□□□□□ -2.27
CDH3P22223 RNU6-602P-201ENST00000411155 105 ntBASIC0.84□□□□□ -2.27
CDH3P22223 snoU13.21-201ENST00000459368 105 ntBASIC0.84□□□□□ -2.27
CDH3P22223 RNU7-45P-201ENST00000459460 63 ntBASIC0.84□□□□□ -2.27
CDH3P22223 ACA64.5-201ENST00000516207 127 ntBASIC0.84□□□□□ -2.27
CDH3P22223 RNA5SP255-201ENST00000516370 107 ntBASIC0.84□□□□□ -2.27
CDH3P22223 SCARNA15-202ENST00000516881 127 ntBASIC0.84□□□□□ -2.27
CDH3P22223 AP000753.3-201ENST00000604083 169 ntBASIC0.84□□□□□ -2.27
CDH3P22223 AC091932.4-201ENST00000623386 200 ntBASIC0.84□□□□□ -2.27
CDH3P22223 MIR373-201ENST00000362273 69 ntBASIC0.83□□□□□ -2.28
CDH3P22223 RNU6-312P-201ENST00000364629 107 ntBASIC0.83□□□□□ -2.28
CDH3P22223 SNORA1.1-201ENST00000364671 133 ntBASIC0.83□□□□□ -2.28
CDH3P22223 RNU6-597P-201ENST00000365620 102 ntBASIC0.83□□□□□ -2.28
CDH3P22223 FABP5P4-201ENST00000437203 171 ntBASIC0.83□□□□□ -2.28
CDH3P22223 RNU6-1223P-201ENST00000517124 104 ntBASIC0.83□□□□□ -2.28
CDH3P22223 SNORA4-201ENST00000584302 138 ntBASIC0.83□□□□□ -2.28
CDH3P22223 uc_338.6-201ENST00000613544 171 ntBASIC0.83□□□□□ -2.28
CDH3P22223 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.83□□□□□ -2.28
CDH3P22223 HSBP1P2-201ENST00000299671 229 ntBASIC0.82□□□□□ -2.28
CDH3P22223 RNU6-1335P-201ENST00000365426 107 ntBASIC0.82□□□□□ -2.28
CDH3P22223 RNU6-768P-201ENST00000384683 107 ntBASIC0.82□□□□□ -2.28
CDH3P22223 SNORD38B-201ENST00000384690 67 ntBASIC0.82□□□□□ -2.28
CDH3P22223 RNU6-994P-201ENST00000410507 111 ntBASIC0.82□□□□□ -2.28
CDH3P22223 RNU7-80P-201ENST00000459562 61 ntBASIC0.82□□□□□ -2.28
CDH3P22223 PSMC1P5-201ENST00000512850 177 ntBASIC0.82□□□□□ -2.28
CDH3P22223 AP002392.1-201ENST00000537692 208 ntBASIC0.82□□□□□ -2.28
CDH3P22223 AC072026.1-201ENST00000605023 201 ntBASIC0.82□□□□□ -2.28
CDH3P22223 MIR6740-201ENST00000618268 113 ntBASIC0.82□□□□□ -2.28
CDH3P22223 MIR6788-201ENST00000618842 66 ntBASIC0.82□□□□□ -2.28
CDH3P22223 MIR6717-201ENST00000622747 73 ntBASIC0.82□□□□□ -2.28
CDH3P22223 SNORD38B-202ENST00000625943 69 ntBASIC0.82□□□□□ -2.28
CDH3P22223 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.81□□□□□ -2.28
CDH3P22223 MIR302B-201ENST00000362188 73 ntBASIC0.81□□□□□ -2.28
CDH3P22223 RNU6-369P-201ENST00000362515 102 ntBASIC0.81□□□□□ -2.28
CDH3P22223 SNORA25.7-201ENST00000364375 127 ntBASIC0.81□□□□□ -2.28
CDH3P22223 Y_RNA.257-201ENST00000364596 102 ntBASIC0.81□□□□□ -2.28
CDH3P22223 Y_RNA.466-201ENST00000384294 113 ntBASIC0.81□□□□□ -2.28
CDH3P22223 Y_RNA.521-201ENST00000384560 114 ntBASIC0.81□□□□□ -2.28
CDH3P22223 RNU5E-9P-201ENST00000411164 104 ntBASIC0.81□□□□□ -2.28
CDH3P22223 Y_RNA.793-201ENST00000411222 111 ntBASIC0.81□□□□□ -2.28
CDH3P22223 RPS3AP1-201ENST00000413190 320 ntBASIC0.81□□□□□ -2.28
CDH3P22223 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.81□□□□□ -2.28
CDH3P22223 RNU6-1149P-201ENST00000516810 97 ntBASIC0.81□□□□□ -2.28
CDH3P22223 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.81□□□□□ -2.28
CDH3P22223 MIR151B-201ENST00000584249 96 ntBASIC0.81□□□□□ -2.28
CDH3P22223 FAM71BP1-201ENST00000604431 523 ntBASIC0.81□□□□□ -2.28
CDH3P22223 AL596211.1-201ENST00000569873 2277 ntBASIC0.81□□□□□ -2.28
CDH3P22223 Y_RNA.393-201ENST00000383936 102 ntBASIC0.8□□□□□ -2.28
CDH3P22223 Y_RNA.454-201ENST00000384224 113 ntBASIC0.8□□□□□ -2.28
CDH3P22223 MIR100-201ENST00000385259 80 ntBASIC0.8□□□□□ -2.28
CDH3P22223 SNORD89-201ENST00000390981 114 ntBASIC0.8□□□□□ -2.28
CDH3P22223 MIR1827-201ENST00000408549 66 ntBASIC0.8□□□□□ -2.28
CDH3P22223 MIR548J-201ENST00000408833 112 ntBASIC0.8□□□□□ -2.28
CDH3P22223 RNU7-62P-201ENST00000458856 62 ntBASIC0.8□□□□□ -2.28
CDH3P22223 U7.7-201ENST00000459276 60 ntBASIC0.8□□□□□ -2.28
CDH3P22223 AC107027.2-201ENST00000512197 115 ntBASIC0.8□□□□□ -2.28
CDH3P22223 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.8□□□□□ -2.28
CDH3P22223 SNORD114-2-201ENST00000363953 78 ntBASIC0.79□□□□□ -2.28
CDH3P22223 RNU6-1082P-201ENST00000364574 107 ntBASIC0.79□□□□□ -2.28
CDH3P22223 MIR608-201ENST00000384820 100 ntBASIC0.79□□□□□ -2.28
CDH3P22223 AC067940.1-201ENST00000458411 300 ntBASIC0.79□□□□□ -2.28
CDH3P22223 RNU7-120P-201ENST00000459334 63 ntBASIC0.79□□□□□ -2.28
CDH3P22223 RNU6-1110P-201ENST00000516462 101 ntBASIC0.79□□□□□ -2.28
CDH3P22223 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.79□□□□□ -2.28
CDH3P22223 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.79□□□□□ -2.28
CDH3P22223 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.79□□□□□ -2.28
CDH3P22223 MIR7111-201ENST00000619751 72 ntBASIC0.79□□□□□ -2.28
CDH3P22223 MTND5P32-201ENST00000560711 1802 ntBASIC0.79□□□□□ -2.28
CDH3P22223 RNU6-682P-201ENST00000363843 106 ntBASIC0.78□□□□□ -2.28
CDH3P22223 Y_RNA.240-201ENST00000364469 95 ntBASIC0.78□□□□□ -2.28
CDH3P22223 SNORD12C-201ENST00000386307 89 ntBASIC0.78□□□□□ -2.28
CDH3P22223 RNU6-1319P-201ENST00000390855 104 ntBASIC0.78□□□□□ -2.28
CDH3P22223 RNU6-747P-201ENST00000390928 104 ntBASIC0.78□□□□□ -2.28
CDH3P22223 RNU6-241P-201ENST00000391148 104 ntBASIC0.78□□□□□ -2.28
CDH3P22223 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.78□□□□□ -2.28
CDH3P22223 RNU6-177P-201ENST00000411257 104 ntBASIC0.78□□□□□ -2.28
CDH3P22223 SNORD83.1-201ENST00000411362 77 ntBASIC0.78□□□□□ -2.28
CDH3P22223 RNU6-861P-201ENST00000516745 106 ntBASIC0.78□□□□□ -2.28
CDH3P22223 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC0.78□□□□□ -2.28
CDH3P22223 CYP3A137P-201ENST00000562436 69 ntBASIC0.78□□□□□ -2.28
CDH3P22223 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 237 ms