Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 RNU6-1187P-201ENST00000364771 110 ntBASIC0.62□□□□□ -2.31
COL5A1P20908 Y_RNA.351-201ENST00000365436 96 ntBASIC0.62□□□□□ -2.31
COL5A1P20908 Y_RNA.357-201ENST00000365487 109 ntBASIC0.62□□□□□ -2.31
COL5A1P20908 Y_RNA.398-201ENST00000383952 99 ntBASIC0.62□□□□□ -2.31
COL5A1P20908 SNORA1-201ENST00000384107 130 ntBASIC0.62□□□□□ -2.31
COL5A1P20908 SNORD61-201ENST00000384252 73 ntBASIC0.62□□□□□ -2.31
COL5A1P20908 AC087499.4-201ENST00000448505 178 ntBASIC0.62□□□□□ -2.31
COL5A1P20908 RNU7-73P-201ENST00000458743 63 ntBASIC0.62□□□□□ -2.31
COL5A1P20908 UBL5P1-201ENST00000507979 193 ntBASIC0.62□□□□□ -2.31
COL5A1P20908 RNU6-998P-201ENST00000515894 101 ntBASIC0.62□□□□□ -2.31
COL5A1P20908 RNU6-1212P-201ENST00000517023 104 ntBASIC0.62□□□□□ -2.31
COL5A1P20908 SNORA81.3-201ENST00000517283 198 ntBASIC0.62□□□□□ -2.31
COL5A1P20908 MIR378D2-201ENST00000580636 98 ntBASIC0.62□□□□□ -2.31
COL5A1P20908 AC131055.1-201ENST00000584626 316 ntBASIC0.62□□□□□ -2.31
COL5A1P20908 Y_RNA.343-201ENST00000365354 112 ntBASIC0.61□□□□□ -2.31
COL5A1P20908 RNU6-1189P-201ENST00000383958 107 ntBASIC0.61□□□□□ -2.31
COL5A1P20908 Y_RNA.441-201ENST00000384123 112 ntBASIC0.61□□□□□ -2.31
COL5A1P20908 RNU6-80P-201ENST00000384195 107 ntBASIC0.61□□□□□ -2.31
COL5A1P20908 RNU6-394P-201ENST00000410735 107 ntBASIC0.61□□□□□ -2.31
COL5A1P20908 snoU13.16-201ENST00000459350 104 ntBASIC0.61□□□□□ -2.31
COL5A1P20908 RNU6-322P-201ENST00000516010 103 ntBASIC0.61□□□□□ -2.31
COL5A1P20908 RNA5SP236-201ENST00000516169 116 ntBASIC0.61□□□□□ -2.31
COL5A1P20908 RNU6-947P-201ENST00000516264 106 ntBASIC0.61□□□□□ -2.31
COL5A1P20908 SNORA74.3-201ENST00000517108 154 ntBASIC0.61□□□□□ -2.31
COL5A1P20908 IGKV1-22-201ENST00000524313 326 ntBASIC0.61□□□□□ -2.31
COL5A1P20908 MIR3129-201ENST00000581095 76 ntBASIC0.61□□□□□ -2.31
COL5A1P20908 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.61□□□□□ -2.31
COL5A1P20908 SEPT14P17-201ENST00000617978 177 ntBASIC0.61□□□□□ -2.31
COL5A1P20908 MIR8063-201ENST00000621930 81 ntBASIC0.61□□□□□ -2.31
COL5A1P20908 MTND5P32-201ENST00000560711 1802 ntBASIC0.61□□□□□ -2.31
COL5A1P20908 SNORD115-34-201ENST00000362441 82 ntBASIC0.61□□□□□ -2.31
COL5A1P20908 SNORD115-12-201ENST00000362583 82 ntBASIC0.61□□□□□ -2.31
COL5A1P20908 SNORD115-29-201ENST00000362834 82 ntBASIC0.61□□□□□ -2.31
COL5A1P20908 SNORD115-9-201ENST00000362912 82 ntBASIC0.61□□□□□ -2.31
COL5A1P20908 SNORD115-21-201ENST00000362963 81 ntBASIC0.61□□□□□ -2.31
COL5A1P20908 SNORD115-14-201ENST00000363090 81 ntBASIC0.61□□□□□ -2.31
COL5A1P20908 SNORD115-13-201ENST00000363358 82 ntBASIC0.61□□□□□ -2.31
COL5A1P20908 SNORD115-41-201ENST00000363608 82 ntBASIC0.61□□□□□ -2.31
COL5A1P20908 SNORD115-11-201ENST00000363616 82 ntBASIC0.61□□□□□ -2.31
COL5A1P20908 SNORD115-5-201ENST00000363633 82 ntBASIC0.61□□□□□ -2.31
COL5A1P20908 SNORD115-39-201ENST00000363694 82 ntBASIC0.61□□□□□ -2.31
COL5A1P20908 SNORD115-4-201ENST00000363810 82 ntBASIC0.61□□□□□ -2.31
COL5A1P20908 SNORD115-16-201ENST00000363887 82 ntBASIC0.61□□□□□ -2.31
COL5A1P20908 SNORD115-6-201ENST00000363942 82 ntBASIC0.61□□□□□ -2.31
COL5A1P20908 RNU6-151P-201ENST00000364158 107 ntBASIC0.61□□□□□ -2.31
COL5A1P20908 SNORD115-42-201ENST00000364273 82 ntBASIC0.61□□□□□ -2.31
COL5A1P20908 SNORD115-15-201ENST00000364809 81 ntBASIC0.61□□□□□ -2.31
COL5A1P20908 SNORD115-1-201ENST00000364961 82 ntBASIC0.61□□□□□ -2.31
COL5A1P20908 SNORD115-26-201ENST00000365067 82 ntBASIC0.61□□□□□ -2.31
COL5A1P20908 SNORD115-10-201ENST00000365073 81 ntBASIC0.61□□□□□ -2.31
COL5A1P20908 SNORD115-43-201ENST00000365503 82 ntBASIC0.61□□□□□ -2.31
COL5A1P20908 SNORD115-36-201ENST00000365629 82 ntBASIC0.61□□□□□ -2.31
COL5A1P20908 MIR570-201ENST00000384917 97 ntBASIC0.61□□□□□ -2.31
COL5A1P20908 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.61□□□□□ -2.31
COL5A1P20908 SNX2P2-201ENST00000424553 323 ntBASIC0.61□□□□□ -2.31
COL5A1P20908 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.61□□□□□ -2.31
COL5A1P20908 snoU13.25-201ENST00000458945 104 ntBASIC0.61□□□□□ -2.31
COL5A1P20908 AC048334.1-201ENST00000477975 159 ntBASIC0.61□□□□□ -2.31
COL5A1P20908 RPS29P24-201ENST00000486345 171 ntBASIC0.61□□□□□ -2.31
COL5A1P20908 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.61□□□□□ -2.31
COL5A1P20908 SNORA31.4-201ENST00000516049 129 ntBASIC0.61□□□□□ -2.31
COL5A1P20908 MIR3121-201ENST00000579680 77 ntBASIC0.61□□□□□ -2.31
COL5A1P20908 SNORD115-40-201ENST00000606510 82 ntBASIC0.61□□□□□ -2.31
COL5A1P20908 MIR4791-201ENST00000607666 84 ntBASIC0.61□□□□□ -2.31
COL5A1P20908 RNU6-888P-201ENST00000363010 101 ntBASIC0.6□□□□□ -2.31
COL5A1P20908 Y_RNA.180-201ENST00000363867 113 ntBASIC0.6□□□□□ -2.31
COL5A1P20908 Y_RNA.337-201ENST00000365312 102 ntBASIC0.6□□□□□ -2.31
COL5A1P20908 MT-TR-201ENST00000387439 65 ntBASIC0.6□□□□□ -2.31
COL5A1P20908 SNORD28B-201ENST00000390993 75 ntBASIC0.6□□□□□ -2.31
COL5A1P20908 Y_RNA.584-201ENST00000391090 114 ntBASIC0.6□□□□□ -2.31
COL5A1P20908 AL035398.1-201ENST00000430869 322 ntBASIC0.6□□□□□ -2.31
COL5A1P20908 snoU13.9-201ENST00000458927 103 ntBASIC0.6□□□□□ -2.31
COL5A1P20908 AC107027.2-201ENST00000512197 115 ntBASIC0.6□□□□□ -2.31
COL5A1P20908 RNU2-13P-201ENST00000515909 113 ntBASIC0.6□□□□□ -2.31
COL5A1P20908 RNU6-922P-201ENST00000516753 99 ntBASIC0.6□□□□□ -2.31
COL5A1P20908 RN7SKP88-201ENST00000516847 250 ntBASIC0.6□□□□□ -2.31
COL5A1P20908 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.6□□□□□ -2.31
COL5A1P20908 MIR3192-201ENST00000584920 77 ntBASIC0.6□□□□□ -2.31
COL5A1P20908 MIR8055-201ENST00000610739 97 ntBASIC0.6□□□□□ -2.31
COL5A1P20908 AC011603.4-201ENST00000611325 277 ntBASIC0.6□□□□□ -2.31
COL5A1P20908 7SK.8-201ENST00000612110 250 ntBASIC0.6□□□□□ -2.31
COL5A1P20908 7SK.11-201ENST00000615477 250 ntBASIC0.6□□□□□ -2.31
COL5A1P20908 7SK.13-201ENST00000622040 250 ntBASIC0.6□□□□□ -2.31
COL5A1P20908 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.6□□□□□ -2.31
COL5A1P20908 MIR342-201ENST00000362212 99 ntBASIC0.59□□□□□ -2.31
COL5A1P20908 MIR302D-201ENST00000362275 68 ntBASIC0.59□□□□□ -2.31
COL5A1P20908 RNU6-349P-201ENST00000362402 107 ntBASIC0.59□□□□□ -2.31
COL5A1P20908 RNU1-124P-201ENST00000363861 145 ntBASIC0.59□□□□□ -2.31
COL5A1P20908 RNU6-309P-201ENST00000364573 106 ntBASIC0.59□□□□□ -2.31
COL5A1P20908 RNU6-396P-201ENST00000365369 105 ntBASIC0.59□□□□□ -2.31
COL5A1P20908 SNORA2.2-201ENST00000365473 135 ntBASIC0.59□□□□□ -2.31
COL5A1P20908 Y_RNA.506-201ENST00000384494 102 ntBASIC0.59□□□□□ -2.31
COL5A1P20908 Y_RNA.547-201ENST00000384654 119 ntBASIC0.59□□□□□ -2.31
COL5A1P20908 Y_RNA.555-201ENST00000384673 110 ntBASIC0.59□□□□□ -2.31
COL5A1P20908 MT-TN-201ENST00000387400 73 ntBASIC0.59□□□□□ -2.31
COL5A1P20908 RPS3AP1-201ENST00000413190 320 ntBASIC0.59□□□□□ -2.31
COL5A1P20908 AC027119.1-201ENST00000440877 241 ntBASIC0.59□□□□□ -2.31
COL5A1P20908 RNU7-121P-201ENST00000516604 62 ntBASIC0.59□□□□□ -2.31
COL5A1P20908 RNU6-958P-201ENST00000516995 106 ntBASIC0.59□□□□□ -2.31
COL5A1P20908 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC0.59□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms