Protein–RNA interactions for Protein: Q9Y566

SHANK1, SH3 and multiple ankyrin repeat domains protein 1, humanhuman

Predictions only

Length 2,161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1Q9Y566 RNU4-45P-201ENST00000365469 141 ntBASIC0.47□□□□□ -2.33
SHANK1Q9Y566 RNU6-364P-201ENST00000384387 107 ntBASIC0.47□□□□□ -2.33
SHANK1Q9Y566 RNU7-67P-201ENST00000459003 62 ntBASIC0.47□□□□□ -2.33
SHANK1Q9Y566 AC091959.1-201ENST00000495857 238 ntBASIC0.47□□□□□ -2.33
SHANK1Q9Y566 RNU6-365P-201ENST00000517113 106 ntBASIC0.47□□□□□ -2.33
SHANK1Q9Y566 AL442067.1-201ENST00000613261 223 ntBASIC0.47□□□□□ -2.33
SHANK1Q9Y566 Y_RNA.802-201ENST00000614892 130 ntBASIC0.47□□□□□ -2.33
SHANK1Q9Y566 AC245060.5-201ENST00000610778 3293 ntBASIC0.47□□□□□ -2.33
SHANK1Q9Y566 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.46□□□□□ -2.34
SHANK1Q9Y566 Y_RNA.24-201ENST00000362508 103 ntBASIC0.46□□□□□ -2.34
SHANK1Q9Y566 Y_RNA.117-201ENST00000363294 101 ntBASIC0.46□□□□□ -2.34
SHANK1Q9Y566 SNORD45.3-201ENST00000363836 72 ntBASIC0.46□□□□□ -2.34
SHANK1Q9Y566 RNU6-268P-201ENST00000364174 107 ntBASIC0.46□□□□□ -2.34
SHANK1Q9Y566 Y_RNA.350-201ENST00000365409 98 ntBASIC0.46□□□□□ -2.34
SHANK1Q9Y566 Y_RNA.376-201ENST00000365638 108 ntBASIC0.46□□□□□ -2.34
SHANK1Q9Y566 Y_RNA.574-201ENST00000384766 95 ntBASIC0.46□□□□□ -2.34
SHANK1Q9Y566 RNU6-205P-201ENST00000390858 107 ntBASIC0.46□□□□□ -2.34
SHANK1Q9Y566 COX6CP6-201ENST00000490840 228 ntBASIC0.46□□□□□ -2.34
SHANK1Q9Y566 SNORD77.4-201ENST00000516158 81 ntBASIC0.46□□□□□ -2.34
SHANK1Q9Y566 Y_RNA.668-201ENST00000516233 93 ntBASIC0.46□□□□□ -2.34
SHANK1Q9Y566 MIR3152-201ENST00000579801 74 ntBASIC0.46□□□□□ -2.34
SHANK1Q9Y566 MIR4804-201ENST00000581683 73 ntBASIC0.46□□□□□ -2.34
SHANK1Q9Y566 7SK.10-201ENST00000621414 298 ntBASIC0.46□□□□□ -2.34
SHANK1Q9Y566 MIR26B-201ENST00000362251 77 ntBASIC0.46□□□□□ -2.34
SHANK1Q9Y566 RNU6-369P-201ENST00000362515 102 ntBASIC0.46□□□□□ -2.34
SHANK1Q9Y566 SNORD114-24-201ENST00000365029 72 ntBASIC0.46□□□□□ -2.34
SHANK1Q9Y566 Y_RNA.380-201ENST00000365663 111 ntBASIC0.46□□□□□ -2.34
SHANK1Q9Y566 MIR548F4-201ENST00000408515 105 ntBASIC0.46□□□□□ -2.34
SHANK1Q9Y566 MTND3P2-201ENST00000438452 342 ntBASIC0.46□□□□□ -2.34
SHANK1Q9Y566 AC087499.4-201ENST00000448505 178 ntBASIC0.46□□□□□ -2.34
SHANK1Q9Y566 SNORD127-201ENST00000458892 86 ntBASIC0.46□□□□□ -2.34
SHANK1Q9Y566 U7.7-201ENST00000459276 60 ntBASIC0.46□□□□□ -2.34
SHANK1Q9Y566 RNU2-13P-201ENST00000515909 113 ntBASIC0.46□□□□□ -2.34
SHANK1Q9Y566 Y_RNA.679-201ENST00000516416 91 ntBASIC0.46□□□□□ -2.34
SHANK1Q9Y566 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.46□□□□□ -2.34
SHANK1Q9Y566 AC134878.1-201ENST00000619901 243 ntBASIC0.46□□□□□ -2.34
SHANK1Q9Y566 MIR367-201ENST00000362299 68 ntBASIC0.45□□□□□ -2.34
SHANK1Q9Y566 Y_RNA.162-201ENST00000363683 102 ntBASIC0.45□□□□□ -2.34
SHANK1Q9Y566 SNORD114-15-201ENST00000364687 72 ntBASIC0.45□□□□□ -2.34
SHANK1Q9Y566 Y_RNA.396-201ENST00000383949 103 ntBASIC0.45□□□□□ -2.34
SHANK1Q9Y566 Y_RNA.432-201ENST00000384087 111 ntBASIC0.45□□□□□ -2.34
SHANK1Q9Y566 AL606845.1-201ENST00000404881 255 ntBASIC0.45□□□□□ -2.34
SHANK1Q9Y566 RNU6-383P-201ENST00000410864 94 ntBASIC0.45□□□□□ -2.34
SHANK1Q9Y566 MIR4802-201ENST00000581881 80 ntBASIC0.45□□□□□ -2.34
SHANK1Q9Y566 AC023932.2-201ENST00000603176 175 ntBASIC0.45□□□□□ -2.34
SHANK1Q9Y566 MIR8055-201ENST00000610739 97 ntBASIC0.45□□□□□ -2.34
SHANK1Q9Y566 AC106800.4-201ENST00000614905 153 ntBASIC0.45□□□□□ -2.34
SHANK1Q9Y566 MIR8062-201ENST00000621515 85 ntBASIC0.45□□□□□ -2.34
SHANK1Q9Y566 snoU18.1-201ENST00000629629 71 ntBASIC0.45□□□□□ -2.34
SHANK1Q9Y566 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
SHANK1Q9Y566 Y_RNA.193-201ENST00000363979 102 ntBASIC0.45□□□□□ -2.34
SHANK1Q9Y566 SNORD27-201ENST00000363981 72 ntBASIC0.45□□□□□ -2.34
SHANK1Q9Y566 RNU6-597P-201ENST00000365620 102 ntBASIC0.45□□□□□ -2.34
SHANK1Q9Y566 Y_RNA.416-201ENST00000384014 113 ntBASIC0.45□□□□□ -2.34
SHANK1Q9Y566 RNU6-30P-201ENST00000384561 107 ntBASIC0.45□□□□□ -2.34
SHANK1Q9Y566 MIR518A1-201ENST00000385068 85 ntBASIC0.45□□□□□ -2.34
SHANK1Q9Y566 MIR520H-201ENST00000385126 88 ntBASIC0.45□□□□□ -2.34
SHANK1Q9Y566 MT-TG-201ENST00000387429 68 ntBASIC0.45□□□□□ -2.34
SHANK1Q9Y566 MIR1827-201ENST00000408549 66 ntBASIC0.45□□□□□ -2.34
SHANK1Q9Y566 MTCYBP9-201ENST00000431021 303 ntBASIC0.45□□□□□ -2.34
SHANK1Q9Y566 AC011921.3-201ENST00000605540 361 ntBASIC0.45□□□□□ -2.34
SHANK1Q9Y566 Y_RNA.812-201ENST00000610788 101 ntBASIC0.45□□□□□ -2.34
SHANK1Q9Y566 Y_RNA.784-201ENST00000613803 101 ntBASIC0.45□□□□□ -2.34
SHANK1Q9Y566 Y_RNA.787-201ENST00000616522 101 ntBASIC0.45□□□□□ -2.34
SHANK1Q9Y566 Y_RNA.780-201ENST00000617336 101 ntBASIC0.45□□□□□ -2.34
SHANK1Q9Y566 Y_RNA.801-201ENST00000619005 101 ntBASIC0.45□□□□□ -2.34
SHANK1Q9Y566 Y_RNA.66-201ENST00000362862 102 ntBASIC0.44□□□□□ -2.34
SHANK1Q9Y566 RNU6-1309P-201ENST00000363305 108 ntBASIC0.44□□□□□ -2.34
SHANK1Q9Y566 Y_RNA.229-201ENST00000364347 113 ntBASIC0.44□□□□□ -2.34
SHANK1Q9Y566 Y_RNA.308-201ENST00000365043 101 ntBASIC0.44□□□□□ -2.34
SHANK1Q9Y566 RNU6-580P-201ENST00000365159 107 ntBASIC0.44□□□□□ -2.34
SHANK1Q9Y566 RNU6-662P-201ENST00000384253 104 ntBASIC0.44□□□□□ -2.34
SHANK1Q9Y566 Y_RNA.539-201ENST00000384635 107 ntBASIC0.44□□□□□ -2.34
SHANK1Q9Y566 SNORA26.6-201ENST00000391256 115 ntBASIC0.44□□□□□ -2.34
SHANK1Q9Y566 SNORA26-201ENST00000391286 122 ntBASIC0.44□□□□□ -2.34
SHANK1Q9Y566 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.44□□□□□ -2.34
SHANK1Q9Y566 RPS26P5-201ENST00000418544 335 ntBASIC0.44□□□□□ -2.34
SHANK1Q9Y566 AC114737.2-201ENST00000421583 173 ntBASIC0.44□□□□□ -2.34
SHANK1Q9Y566 FABP5P4-201ENST00000437203 171 ntBASIC0.44□□□□□ -2.34
SHANK1Q9Y566 RNU6-977P-201ENST00000516411 103 ntBASIC0.44□□□□□ -2.34
SHANK1Q9Y566 AC004817.2-201ENST00000561794 651 ntBASIC0.44□□□□□ -2.34
SHANK1Q9Y566 MIR4643-201ENST00000577473 78 ntBASIC0.44□□□□□ -2.34
SHANK1Q9Y566 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.44□□□□□ -2.34
SHANK1Q9Y566 Y_RNA.76-201ENST00000362931 109 ntBASIC0.43□□□□□ -2.34
SHANK1Q9Y566 RNU6-653P-201ENST00000363074 106 ntBASIC0.43□□□□□ -2.34
SHANK1Q9Y566 SNORD61-201ENST00000384252 73 ntBASIC0.43□□□□□ -2.34
SHANK1Q9Y566 Y_RNA.486-201ENST00000384398 107 ntBASIC0.43□□□□□ -2.34
SHANK1Q9Y566 Y_RNA.547-201ENST00000384654 119 ntBASIC0.43□□□□□ -2.34
SHANK1Q9Y566 Y_RNA.569-201ENST00000384749 103 ntBASIC0.43□□□□□ -2.34
SHANK1Q9Y566 MIR626-201ENST00000385032 94 ntBASIC0.43□□□□□ -2.34
SHANK1Q9Y566 MIR548I3-201ENST00000408378 149 ntBASIC0.43□□□□□ -2.34
SHANK1Q9Y566 RPL39P25-201ENST00000449384 154 ntBASIC0.43□□□□□ -2.34
SHANK1Q9Y566 RNU2-11P-201ENST00000459191 187 ntBASIC0.43□□□□□ -2.34
SHANK1Q9Y566 SNORD124-201ENST00000459577 104 ntBASIC0.43□□□□□ -2.34
SHANK1Q9Y566 PDCD5P2-201ENST00000507570 312 ntBASIC0.43□□□□□ -2.34
SHANK1Q9Y566 RNU6-758P-201ENST00000516292 89 ntBASIC0.43□□□□□ -2.34
SHANK1Q9Y566 RNU6-448P-201ENST00000517052 107 ntBASIC0.43□□□□□ -2.34
SHANK1Q9Y566 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
SHANK1Q9Y566 AC025627.3-201ENST00000582078 182 ntBASIC0.43□□□□□ -2.34
SHANK1Q9Y566 AL096861.1-201ENST00000610899 123 ntBASIC0.43□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 367.6 ms