Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 AC006461.1-201ENST00000412637 326 ntBASIC1.21□□□□□ -2.22
SIN3AQ96ST3 RPS29P1-201ENST00000465274 159 ntBASIC1.21□□□□□ -2.22
SIN3AQ96ST3 MTND1P7-201ENST00000632801 297 ntBASIC1.21□□□□□ -2.22
SIN3AQ96ST3 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.21□□□□□ -2.22
SIN3AQ96ST3 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
SIN3AQ96ST3 RNU6-1189P-201ENST00000383958 107 ntBASIC1.2□□□□□ -2.22
SIN3AQ96ST3 Y_RNA.440-201ENST00000384120 114 ntBASIC1.2□□□□□ -2.22
SIN3AQ96ST3 SNORA27-201ENST00000384323 126 ntBASIC1.2□□□□□ -2.22
SIN3AQ96ST3 RNU6-1067P-201ENST00000384752 107 ntBASIC1.2□□□□□ -2.22
SIN3AQ96ST3 MIR618-201ENST00000385287 98 ntBASIC1.2□□□□□ -2.22
SIN3AQ96ST3 SNORA75.2-201ENST00000391138 150 ntBASIC1.2□□□□□ -2.22
SIN3AQ96ST3 SNORA75.3-201ENST00000391231 150 ntBASIC1.2□□□□□ -2.22
SIN3AQ96ST3 MTND5P15-201ENST00000434246 349 ntBASIC1.2□□□□□ -2.22
SIN3AQ96ST3 SEPT7P4-201ENST00000437076 306 ntBASIC1.2□□□□□ -2.22
SIN3AQ96ST3 AL392103.1-201ENST00000447000 198 ntBASIC1.2□□□□□ -2.22
SIN3AQ96ST3 SNORD79.1-201ENST00000516069 84 ntBASIC1.2□□□□□ -2.22
SIN3AQ96ST3 RNU6-861P-201ENST00000516745 106 ntBASIC1.2□□□□□ -2.22
SIN3AQ96ST3 AC019288.1-201ENST00000557918 224 ntBASIC1.2□□□□□ -2.22
SIN3AQ96ST3 MIR548AO-201ENST00000579992 96 ntBASIC1.2□□□□□ -2.22
SIN3AQ96ST3 MIR3671-201ENST00000580455 88 ntBASIC1.2□□□□□ -2.22
SIN3AQ96ST3 AC004792.1-201ENST00000614523 137 ntBASIC1.2□□□□□ -2.22
SIN3AQ96ST3 AC027335.2-201ENST00000624030 375 ntBASIC1.2□□□□□ -2.22
SIN3AQ96ST3 MIR103A2-201ENST00000362154 78 ntBASIC1.19□□□□□ -2.22
SIN3AQ96ST3 Y_RNA.240-201ENST00000364469 95 ntBASIC1.19□□□□□ -2.22
SIN3AQ96ST3 RNU6-1292P-201ENST00000383856 107 ntBASIC1.19□□□□□ -2.22
SIN3AQ96ST3 SNORA25-201ENST00000384384 134 ntBASIC1.19□□□□□ -2.22
SIN3AQ96ST3 RNU5E-9P-201ENST00000411164 104 ntBASIC1.19□□□□□ -2.22
SIN3AQ96ST3 SNORA70.22-201ENST00000517160 124 ntBASIC1.19□□□□□ -2.22
SIN3AQ96ST3 RNU6-794P-201ENST00000517261 64 ntBASIC1.19□□□□□ -2.22
SIN3AQ96ST3 MIR5197-201ENST00000583721 112 ntBASIC1.19□□□□□ -2.22
SIN3AQ96ST3 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.19□□□□□ -2.22
SIN3AQ96ST3 Y_RNA.191-201ENST00000363972 113 ntBASIC1.18□□□□□ -2.22
SIN3AQ96ST3 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
SIN3AQ96ST3 AC107297.1-201ENST00000459991 176 ntBASIC1.18□□□□□ -2.22
SIN3AQ96ST3 RPS29P24-201ENST00000486345 171 ntBASIC1.18□□□□□ -2.22
SIN3AQ96ST3 MIR6857-201ENST00000613267 93 ntBASIC1.18□□□□□ -2.22
SIN3AQ96ST3 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.18□□□□□ -2.22
SIN3AQ96ST3 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
SIN3AQ96ST3 Y_RNA.224-201ENST00000364308 111 ntBASIC1.17□□□□□ -2.22
SIN3AQ96ST3 RNU6-1187P-201ENST00000364771 110 ntBASIC1.17□□□□□ -2.22
SIN3AQ96ST3 RNU6-351P-201ENST00000516097 100 ntBASIC1.17□□□□□ -2.22
SIN3AQ96ST3 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.17□□□□□ -2.22
SIN3AQ96ST3 MIR4452-201ENST00000583004 71 ntBASIC1.17□□□□□ -2.22
SIN3AQ96ST3 RNU6-597P-201ENST00000365620 102 ntBASIC1.16□□□□□ -2.22
SIN3AQ96ST3 RNU6-1336P-201ENST00000383886 109 ntBASIC1.16□□□□□ -2.22
SIN3AQ96ST3 SNORA80D-201ENST00000384488 135 ntBASIC1.16□□□□□ -2.22
SIN3AQ96ST3 RNU6-768P-201ENST00000384683 107 ntBASIC1.16□□□□□ -2.22
SIN3AQ96ST3 RNU6-913P-201ENST00000390913 95 ntBASIC1.16□□□□□ -2.22
SIN3AQ96ST3 MRPL35P3-201ENST00000421557 364 ntBASIC1.16□□□□□ -2.22
SIN3AQ96ST3 RNU7-67P-201ENST00000459003 62 ntBASIC1.16□□□□□ -2.22
SIN3AQ96ST3 RNU7-21P-201ENST00000459430 62 ntBASIC1.16□□□□□ -2.22
SIN3AQ96ST3 AC107027.2-201ENST00000512197 115 ntBASIC1.16□□□□□ -2.22
SIN3AQ96ST3 RNU6-998P-201ENST00000515894 101 ntBASIC1.16□□□□□ -2.22
SIN3AQ96ST3 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.16□□□□□ -2.22
SIN3AQ96ST3 SNORA4-201ENST00000584302 138 ntBASIC1.16□□□□□ -2.22
SIN3AQ96ST3 AC211469.2-201ENST00000605461 205 ntBASIC1.16□□□□□ -2.22
SIN3AQ96ST3 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.15□□□□□ -2.22
SIN3AQ96ST3 RNU4-84P-201ENST00000364200 139 ntBASIC1.15□□□□□ -2.23
SIN3AQ96ST3 SNORA70.7-201ENST00000384159 133 ntBASIC1.15□□□□□ -2.23
SIN3AQ96ST3 MIR624-201ENST00000385217 97 ntBASIC1.15□□□□□ -2.23
SIN3AQ96ST3 SNORD12-201ENST00000391002 90 ntBASIC1.15□□□□□ -2.23
SIN3AQ96ST3 RNA5SP127-201ENST00000411051 133 ntBASIC1.15□□□□□ -2.23
SIN3AQ96ST3 AC108059.2-201ENST00000434626 151 ntBASIC1.15□□□□□ -2.23
SIN3AQ96ST3 RNU7-73P-201ENST00000458743 63 ntBASIC1.15□□□□□ -2.23
SIN3AQ96ST3 snoU13.16-201ENST00000459350 104 ntBASIC1.15□□□□□ -2.23
SIN3AQ96ST3 RNU7-96P-201ENST00000459535 64 ntBASIC1.15□□□□□ -2.23
SIN3AQ96ST3 AC074198.2-201ENST00000508153 258 ntBASIC1.15□□□□□ -2.23
SIN3AQ96ST3 RNU6-958P-201ENST00000516995 106 ntBASIC1.15□□□□□ -2.23
SIN3AQ96ST3 MIR6516-201ENST00000630554 81 ntBASIC1.15□□□□□ -2.23
SIN3AQ96ST3 Y_RNA.393-201ENST00000383936 102 ntBASIC1.14□□□□□ -2.23
SIN3AQ96ST3 Y_RNA.521-201ENST00000384560 114 ntBASIC1.14□□□□□ -2.23
SIN3AQ96ST3 RNU2-64P-201ENST00000411315 191 ntBASIC1.14□□□□□ -2.23
SIN3AQ96ST3 AC090844.1-201ENST00000422019 156 ntBASIC1.14□□□□□ -2.23
SIN3AQ96ST3 AC002429.1-201ENST00000437672 148 ntBASIC1.14□□□□□ -2.23
SIN3AQ96ST3 RNU11-2P-201ENST00000516898 142 ntBASIC1.14□□□□□ -2.23
SIN3AQ96ST3 RNA5SP404-201ENST00000517118 132 ntBASIC1.14□□□□□ -2.23
SIN3AQ96ST3 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.14□□□□□ -2.23
SIN3AQ96ST3 SEPT14P17-201ENST00000617978 177 ntBASIC1.14□□□□□ -2.23
SIN3AQ96ST3 AC008163.1-202ENST00000636004 2889 ntBASIC1.13□□□□□ -2.23
SIN3AQ96ST3 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.13□□□□□ -2.23
SIN3AQ96ST3 Y_RNA.118-201ENST00000363300 101 ntBASIC1.13□□□□□ -2.23
SIN3AQ96ST3 SNORD114-2-201ENST00000363953 78 ntBASIC1.13□□□□□ -2.23
SIN3AQ96ST3 RNU6-654P-201ENST00000364373 107 ntBASIC1.13□□□□□ -2.23
SIN3AQ96ST3 SNORA25.7-201ENST00000364375 127 ntBASIC1.13□□□□□ -2.23
SIN3AQ96ST3 Y_RNA.441-201ENST00000384123 112 ntBASIC1.13□□□□□ -2.23
SIN3AQ96ST3 RNU6-239P-201ENST00000390990 99 ntBASIC1.13□□□□□ -2.23
SIN3AQ96ST3 RNU6ATAC31P-201ENST00000408513 126 ntBASIC1.13□□□□□ -2.23
SIN3AQ96ST3 AC063976.4-201ENST00000421971 163 ntBASIC1.13□□□□□ -2.23
SIN3AQ96ST3 AL035398.1-201ENST00000430869 322 ntBASIC1.13□□□□□ -2.23
SIN3AQ96ST3 RNU2-11P-201ENST00000459191 187 ntBASIC1.13□□□□□ -2.23
SIN3AQ96ST3 Y_RNA.662-201ENST00000516028 97 ntBASIC1.13□□□□□ -2.23
SIN3AQ96ST3 RNU7-121P-201ENST00000516604 62 ntBASIC1.13□□□□□ -2.23
SIN3AQ96ST3 SCARNA15-202ENST00000516881 127 ntBASIC1.13□□□□□ -2.23
SIN3AQ96ST3 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.13□□□□□ -2.23
SIN3AQ96ST3 RNU6-1082P-201ENST00000364574 107 ntBASIC1.12□□□□□ -2.23
SIN3AQ96ST3 Y_RNA.337-201ENST00000365312 102 ntBASIC1.12□□□□□ -2.23
SIN3AQ96ST3 MIR19B1-201ENST00000384829 87 ntBASIC1.12□□□□□ -2.23
SIN3AQ96ST3 MIR489-201ENST00000384923 84 ntBASIC1.12□□□□□ -2.23
SIN3AQ96ST3 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.12□□□□□ -2.23
SIN3AQ96ST3 OR2A41P-201ENST00000473586 105 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms