Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
KRT28Q7Z3Y7 SNORA25.7-201ENST00000364375 127 ntBASIC1.53□□□□□ -2.16
KRT28Q7Z3Y7 Y_RNA.410-201ENST00000383992 113 ntBASIC1.53□□□□□ -2.16
KRT28Q7Z3Y7 SNORD77.3-201ENST00000391113 65 ntBASIC1.53□□□□□ -2.16
KRT28Q7Z3Y7 RNU6-165P-201ENST00000517170 99 ntBASIC1.53□□□□□ -2.16
KRT28Q7Z3Y7 CYP3A52P-201ENST00000563326 91 ntBASIC1.53□□□□□ -2.16
KRT28Q7Z3Y7 MIR5000-201ENST00000577717 103 ntBASIC1.53□□□□□ -2.16
KRT28Q7Z3Y7 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.53□□□□□ -2.16
KRT28Q7Z3Y7 SNORA24-201ENST00000384096 131 ntBASIC1.52□□□□□ -2.17
KRT28Q7Z3Y7 RNU6-768P-201ENST00000384683 107 ntBASIC1.52□□□□□ -2.17
KRT28Q7Z3Y7 MIR570-201ENST00000384917 97 ntBASIC1.52□□□□□ -2.17
KRT28Q7Z3Y7 MIR624-201ENST00000385217 97 ntBASIC1.52□□□□□ -2.17
KRT28Q7Z3Y7 MIR3646-201ENST00000578301 84 ntBASIC1.52□□□□□ -2.17
KRT28Q7Z3Y7 MIR376A2-201ENST00000636782 80 ntBASIC1.52□□□□□ -2.17
KRT28Q7Z3Y7 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.51□□□□□ -2.17
KRT28Q7Z3Y7 SNORD115-34-201ENST00000362441 82 ntBASIC1.51□□□□□ -2.17
KRT28Q7Z3Y7 SNORD115-12-201ENST00000362583 82 ntBASIC1.51□□□□□ -2.17
KRT28Q7Z3Y7 SNORD115-29-201ENST00000362834 82 ntBASIC1.51□□□□□ -2.17
KRT28Q7Z3Y7 SNORD115-9-201ENST00000362912 82 ntBASIC1.51□□□□□ -2.17
KRT28Q7Z3Y7 SNORD115-21-201ENST00000362963 81 ntBASIC1.51□□□□□ -2.17
KRT28Q7Z3Y7 SNORD115-14-201ENST00000363090 81 ntBASIC1.51□□□□□ -2.17
KRT28Q7Z3Y7 SNORD115-13-201ENST00000363358 82 ntBASIC1.51□□□□□ -2.17
KRT28Q7Z3Y7 SNORD115-41-201ENST00000363608 82 ntBASIC1.51□□□□□ -2.17
KRT28Q7Z3Y7 SNORD115-11-201ENST00000363616 82 ntBASIC1.51□□□□□ -2.17
KRT28Q7Z3Y7 SNORD115-5-201ENST00000363633 82 ntBASIC1.51□□□□□ -2.17
KRT28Q7Z3Y7 SNORD115-39-201ENST00000363694 82 ntBASIC1.51□□□□□ -2.17
KRT28Q7Z3Y7 SNORD115-4-201ENST00000363810 82 ntBASIC1.51□□□□□ -2.17
KRT28Q7Z3Y7 SNORD115-16-201ENST00000363887 82 ntBASIC1.51□□□□□ -2.17
KRT28Q7Z3Y7 SNORD115-6-201ENST00000363942 82 ntBASIC1.51□□□□□ -2.17
KRT28Q7Z3Y7 SNORD115-42-201ENST00000364273 82 ntBASIC1.51□□□□□ -2.17
KRT28Q7Z3Y7 SNORD115-15-201ENST00000364809 81 ntBASIC1.51□□□□□ -2.17
KRT28Q7Z3Y7 SNORD115-1-201ENST00000364961 82 ntBASIC1.51□□□□□ -2.17
KRT28Q7Z3Y7 SNORD115-26-201ENST00000365067 82 ntBASIC1.51□□□□□ -2.17
KRT28Q7Z3Y7 SNORD115-10-201ENST00000365073 81 ntBASIC1.51□□□□□ -2.17
KRT28Q7Z3Y7 SNORD115-43-201ENST00000365503 82 ntBASIC1.51□□□□□ -2.17
KRT28Q7Z3Y7 SNORD115-36-201ENST00000365629 82 ntBASIC1.51□□□□□ -2.17
KRT28Q7Z3Y7 RNU6-1189P-201ENST00000383958 107 ntBASIC1.51□□□□□ -2.17
KRT28Q7Z3Y7 SNORA18.4-201ENST00000516440 124 ntBASIC1.51□□□□□ -2.17
KRT28Q7Z3Y7 SNORD36C-201ENST00000516733 66 ntBASIC1.51□□□□□ -2.17
KRT28Q7Z3Y7 SNORD115-40-201ENST00000606510 82 ntBASIC1.51□□□□□ -2.17
KRT28Q7Z3Y7 MIR8065-201ENST00000620577 100 ntBASIC1.51□□□□□ -2.17
KRT28Q7Z3Y7 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.51□□□□□ -2.17
KRT28Q7Z3Y7 SNORA40.5-201ENST00000391061 128 ntBASIC1.5□□□□□ -2.17
KRT28Q7Z3Y7 RNU7-67P-201ENST00000459003 62 ntBASIC1.5□□□□□ -2.17
KRT28Q7Z3Y7 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.5□□□□□ -2.17
KRT28Q7Z3Y7 MIR3144-201ENST00000579460 79 ntBASIC1.5□□□□□ -2.17
KRT28Q7Z3Y7 MIR5197-201ENST00000583721 112 ntBASIC1.5□□□□□ -2.17
KRT28Q7Z3Y7 DNAJC19P2-201ENST00000593340 302 ntBASIC1.5□□□□□ -2.17
KRT28Q7Z3Y7 AL096861.1-201ENST00000610899 123 ntBASIC1.5□□□□□ -2.17
KRT28Q7Z3Y7 AC008133.2-201ENST00000624540 351 ntBASIC1.5□□□□□ -2.17
KRT28Q7Z3Y7 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
KRT28Q7Z3Y7 RNU6-209P-201ENST00000384118 107 ntBASIC1.49□□□□□ -2.17
KRT28Q7Z3Y7 SNORA27-201ENST00000384323 126 ntBASIC1.49□□□□□ -2.17
KRT28Q7Z3Y7 SNORA51.10-201ENST00000384418 136 ntBASIC1.49□□□□□ -2.17
KRT28Q7Z3Y7 SNORD37.2-201ENST00000391075 66 ntBASIC1.49□□□□□ -2.17
KRT28Q7Z3Y7 snoU13.25-201ENST00000458945 104 ntBASIC1.49□□□□□ -2.17
KRT28Q7Z3Y7 RPS26P48-201ENST00000491713 339 ntBASIC1.49□□□□□ -2.17
KRT28Q7Z3Y7 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.49□□□□□ -2.17
KRT28Q7Z3Y7 RNU7-41P-201ENST00000515917 61 ntBASIC1.49□□□□□ -2.17
KRT28Q7Z3Y7 Y_RNA.681-201ENST00000516445 113 ntBASIC1.49□□□□□ -2.17
KRT28Q7Z3Y7 AC090821.2-201ENST00000523552 176 ntBASIC1.49□□□□□ -2.17
KRT28Q7Z3Y7 MIR3192-201ENST00000584920 77 ntBASIC1.49□□□□□ -2.17
KRT28Q7Z3Y7 AC104465.1-201ENST00000611365 139 ntBASIC1.49□□□□□ -2.17
KRT28Q7Z3Y7 MIR6844-201ENST00000637122 62 ntBASIC1.49□□□□□ -2.17
KRT28Q7Z3Y7 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC1.49□□□□□ -2.17
KRT28Q7Z3Y7 RNA5SP457-201ENST00000363657 124 ntBASIC1.48□□□□□ -2.17
KRT28Q7Z3Y7 Y_RNA.433-201ENST00000384089 102 ntBASIC1.48□□□□□ -2.17
KRT28Q7Z3Y7 Y_RNA.440-201ENST00000384120 114 ntBASIC1.48□□□□□ -2.17
KRT28Q7Z3Y7 Y_RNA.494-201ENST00000384432 111 ntBASIC1.48□□□□□ -2.17
KRT28Q7Z3Y7 Y_RNA.537-201ENST00000384626 109 ntBASIC1.48□□□□□ -2.17
KRT28Q7Z3Y7 RNA5SP127-201ENST00000411051 133 ntBASIC1.48□□□□□ -2.17
KRT28Q7Z3Y7 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.48□□□□□ -2.17
KRT28Q7Z3Y7 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.48□□□□□ -2.17
KRT28Q7Z3Y7 AP003716.2-201ENST00000528260 108 ntBASIC1.48□□□□□ -2.17
KRT28Q7Z3Y7 MIR4791-201ENST00000607666 84 ntBASIC1.48□□□□□ -2.17
KRT28Q7Z3Y7 AC243994.1-201ENST00000618627 109 ntBASIC1.48□□□□□ -2.17
KRT28Q7Z3Y7 MIR4251-201ENST00000635819 61 ntBASIC1.48□□□□□ -2.17
KRT28Q7Z3Y7 MIR3658-201ENST00000636291 56 ntBASIC1.48□□□□□ -2.17
KRT28Q7Z3Y7 MIR342-201ENST00000362212 99 ntBASIC1.47□□□□□ -2.17
KRT28Q7Z3Y7 RNU6-1082P-201ENST00000364574 107 ntBASIC1.47□□□□□ -2.17
KRT28Q7Z3Y7 RNU6-1130P-201ENST00000365434 107 ntBASIC1.47□□□□□ -2.17
KRT28Q7Z3Y7 SNORA70.7-201ENST00000384159 133 ntBASIC1.47□□□□□ -2.17
KRT28Q7Z3Y7 RNU6-804P-201ENST00000384286 107 ntBASIC1.47□□□□□ -2.17
KRT28Q7Z3Y7 MIR193B-201ENST00000384907 83 ntBASIC1.47□□□□□ -2.17
KRT28Q7Z3Y7 SNORA75.5-201ENST00000391291 81 ntBASIC1.47□□□□□ -2.17
KRT28Q7Z3Y7 RNU6-1054P-201ENST00000411293 104 ntBASIC1.47□□□□□ -2.17
KRT28Q7Z3Y7 SCARNA15-202ENST00000516881 127 ntBASIC1.47□□□□□ -2.17
KRT28Q7Z3Y7 Y_RNA.8-201ENST00000362353 102 ntBASIC1.46□□□□□ -2.18
KRT28Q7Z3Y7 RNA5SP48-201ENST00000363969 126 ntBASIC1.46□□□□□ -2.18
KRT28Q7Z3Y7 AL133373.1-201ENST00000497098 94 ntBASIC1.46□□□□□ -2.18
KRT28Q7Z3Y7 RNU7-70P-201ENST00000516941 66 ntBASIC1.46□□□□□ -2.18
KRT28Q7Z3Y7 RNU6-255P-201ENST00000516957 105 ntBASIC1.46□□□□□ -2.18
KRT28Q7Z3Y7 RNU6-958P-201ENST00000516995 106 ntBASIC1.46□□□□□ -2.18
KRT28Q7Z3Y7 AC211469.2-201ENST00000605461 205 ntBASIC1.46□□□□□ -2.18
KRT28Q7Z3Y7 RNU1-133P-201ENST00000364867 167 ntBASIC1.45□□□□□ -2.18
KRT28Q7Z3Y7 RNU6-1336P-201ENST00000383886 109 ntBASIC1.45□□□□□ -2.18
KRT28Q7Z3Y7 Y_RNA.398-201ENST00000383952 99 ntBASIC1.45□□□□□ -2.18
KRT28Q7Z3Y7 RPS29P23-201ENST00000458635 123 ntBASIC1.45□□□□□ -2.18
KRT28Q7Z3Y7 RNU7-197P-201ENST00000458836 62 ntBASIC1.45□□□□□ -2.18
KRT28Q7Z3Y7 RPS29P24-201ENST00000486345 171 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms