Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 MIR365A-201ENST00000362260 87 ntBASIC-2.28□□□□□ -2.77
CCDC58Q4VC31 Y_RNA.101-201ENST00000363154 102 ntBASIC-2.28□□□□□ -2.77
CCDC58Q4VC31 RNA5SP133-201ENST00000363368 119 ntBASIC-2.28□□□□□ -2.77
CCDC58Q4VC31 Y_RNA.244-201ENST00000364484 109 ntBASIC-2.28□□□□□ -2.77
CCDC58Q4VC31 Y_RNA.247-201ENST00000364500 92 ntBASIC-2.28□□□□□ -2.77
CCDC58Q4VC31 RNY1P13-201ENST00000365030 105 ntBASIC-2.28□□□□□ -2.77
CCDC58Q4VC31 RNU6-540P-201ENST00000384622 101 ntBASIC-2.28□□□□□ -2.77
CCDC58Q4VC31 MIR124-2-201ENST00000385081 109 ntBASIC-2.28□□□□□ -2.77
CCDC58Q4VC31 RNU6-710P-201ENST00000410424 105 ntBASIC-2.28□□□□□ -2.77
CCDC58Q4VC31 MIR548H5-201ENST00000580314 60 ntBASIC-2.28□□□□□ -2.77
CCDC58Q4VC31 MIR4441-201ENST00000582623 100 ntBASIC-2.28□□□□□ -2.77
CCDC58Q4VC31 AL157392.4-201ENST00000609756 345 ntBASIC-2.28□□□□□ -2.77
CCDC58Q4VC31 Y_RNA.159-201ENST00000363674 87 ntBASIC-2.29□□□□□ -2.78
CCDC58Q4VC31 Y_RNA.229-201ENST00000364347 113 ntBASIC-2.29□□□□□ -2.78
CCDC58Q4VC31 RNU4-50P-201ENST00000364361 141 ntBASIC-2.29□□□□□ -2.78
CCDC58Q4VC31 Y_RNA.310-201ENST00000365063 113 ntBASIC-2.29□□□□□ -2.78
CCDC58Q4VC31 RNU6-1130P-201ENST00000365434 107 ntBASIC-2.29□□□□□ -2.78
CCDC58Q4VC31 Y_RNA.430-201ENST00000384081 110 ntBASIC-2.29□□□□□ -2.78
CCDC58Q4VC31 RNU6-906P-201ENST00000384700 70 ntBASIC-2.29□□□□□ -2.78
CCDC58Q4VC31 MIR190B-201ENST00000401119 79 ntBASIC-2.29□□□□□ -2.78
CCDC58Q4VC31 RNU2-51P-201ENST00000410708 197 ntBASIC-2.29□□□□□ -2.78
CCDC58Q4VC31 AC021146.9-201ENST00000512503 156 ntBASIC-2.29□□□□□ -2.78
CCDC58Q4VC31 RNU6-408P-201ENST00000515910 100 ntBASIC-2.29□□□□□ -2.78
CCDC58Q4VC31 SNORD36C-201ENST00000516733 66 ntBASIC-2.29□□□□□ -2.78
CCDC58Q4VC31 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC-2.29□□□□□ -2.78
CCDC58Q4VC31 AC060780.3-201ENST00000589464 80 ntBASIC-2.29□□□□□ -2.78
CCDC58Q4VC31 AC124303.1-201ENST00000605703 360 ntBASIC-2.29□□□□□ -2.78
CCDC58Q4VC31 AC019193.3-201ENST00000609144 554 ntBASIC-2.29□□□□□ -2.78
CCDC58Q4VC31 Y_RNA.28-201ENST00000362554 111 ntBASIC-2.3□□□□□ -2.78
CCDC58Q4VC31 Y_RNA.341-201ENST00000365341 102 ntBASIC-2.3□□□□□ -2.78
CCDC58Q4VC31 Y_RNA.557-201ENST00000384680 107 ntBASIC-2.3□□□□□ -2.78
CCDC58Q4VC31 SNORD37.1-201ENST00000390968 65 ntBASIC-2.3□□□□□ -2.78
CCDC58Q4VC31 RNU6-412P-201ENST00000516434 106 ntBASIC-2.3□□□□□ -2.78
CCDC58Q4VC31 AC068339.1-201ENST00000526965 141 ntBASIC-2.3□□□□□ -2.78
CCDC58Q4VC31 AL445584.3-201ENST00000617173 78 ntBASIC-2.3□□□□□ -2.78
CCDC58Q4VC31 MIR548AY-201ENST00000617669 107 ntBASIC-2.3□□□□□ -2.78
CCDC58Q4VC31 AC091912.2-201ENST00000624798 167 ntBASIC-2.3□□□□□ -2.78
CCDC58Q4VC31 Y_RNA.86-201ENST00000363020 111 ntBASIC-2.31□□□□□ -2.78
CCDC58Q4VC31 SNORD116-9-201ENST00000384000 95 ntBASIC-2.31□□□□□ -2.78
CCDC58Q4VC31 SNORD116-3-201ENST00000384287 95 ntBASIC-2.31□□□□□ -2.78
CCDC58Q4VC31 SNORD116-8-201ENST00000384365 95 ntBASIC-2.31□□□□□ -2.78
CCDC58Q4VC31 SNORD116-7-201ENST00000384404 95 ntBASIC-2.31□□□□□ -2.78
CCDC58Q4VC31 SNORD116-5-201ENST00000384462 95 ntBASIC-2.31□□□□□ -2.78
CCDC58Q4VC31 RNA5SP86-201ENST00000390869 98 ntBASIC-2.31□□□□□ -2.78
CCDC58Q4VC31 AL606845.1-201ENST00000404881 255 ntBASIC-2.31□□□□□ -2.78
CCDC58Q4VC31 RNU4-61P-201ENST00000411243 107 ntBASIC-2.31□□□□□ -2.78
CCDC58Q4VC31 RNU7-45P-201ENST00000459460 63 ntBASIC-2.31□□□□□ -2.78
CCDC58Q4VC31 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-2.31□□□□□ -2.78
CCDC58Q4VC31 MIR4273-201ENST00000582824 84 ntBASIC-2.31□□□□□ -2.78
CCDC58Q4VC31 AC122108.2-201ENST00000611946 526 ntBASIC-2.31□□□□□ -2.78
CCDC58Q4VC31 Y_RNA.456-201ENST00000384232 111 ntBASIC-2.32□□□□□ -2.78
CCDC58Q4VC31 Y_RNA.488-201ENST00000384403 102 ntBASIC-2.32□□□□□ -2.78
CCDC58Q4VC31 MIR617-201ENST00000385030 97 ntBASIC-2.32□□□□□ -2.78
CCDC58Q4VC31 SNORD12B-201ENST00000410433 91 ntBASIC-2.32□□□□□ -2.78
CCDC58Q4VC31 RNU6-983P-201ENST00000516004 103 ntBASIC-2.32□□□□□ -2.78
CCDC58Q4VC31 Y_RNA.700-201ENST00000516806 100 ntBASIC-2.32□□□□□ -2.78
CCDC58Q4VC31 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-2.32□□□□□ -2.78
CCDC58Q4VC31 AL121655.1-201ENST00000605811 308 ntBASIC-2.32□□□□□ -2.78
CCDC58Q4VC31 AC007494.3-201ENST00000624660 743 ntBASIC-2.32□□□□□ -2.78
CCDC58Q4VC31 SNORA2.1-201ENST00000363089 137 ntBASIC-2.33□□□□□ -2.78
CCDC58Q4VC31 SNORD113-6-201ENST00000363345 75 ntBASIC-2.33□□□□□ -2.78
CCDC58Q4VC31 Y_RNA.214-201ENST00000364201 112 ntBASIC-2.33□□□□□ -2.78
CCDC58Q4VC31 RNY1P2-201ENST00000364820 117 ntBASIC-2.33□□□□□ -2.78
CCDC58Q4VC31 RNU6-571P-201ENST00000384128 107 ntBASIC-2.33□□□□□ -2.78
CCDC58Q4VC31 AC097635.1-201ENST00000450678 155 ntBASIC-2.33□□□□□ -2.78
CCDC58Q4VC31 RNU7-87P-201ENST00000459343 62 ntBASIC-2.33□□□□□ -2.78
CCDC58Q4VC31 MTND3P7-201ENST00000474435 343 ntBASIC-2.33□□□□□ -2.78
CCDC58Q4VC31 TRAJ51-201ENST00000504127 63 ntBASIC-2.33□□□□□ -2.78
CCDC58Q4VC31 RNU6-759P-201ENST00000516740 103 ntBASIC-2.33□□□□□ -2.78
CCDC58Q4VC31 Y_RNA.802-201ENST00000614892 130 ntBASIC-2.33□□□□□ -2.78
CCDC58Q4VC31 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC-2.33□□□□□ -2.78
CCDC58Q4VC31 U6.109-201ENST00000636749 87 ntBASIC-2.33□□□□□ -2.78
CCDC58Q4VC31 RNU6-1158P-201ENST00000391167 107 ntBASIC-2.34□□□□□ -2.78
CCDC58Q4VC31 Y_RNA.587-201ENST00000391210 103 ntBASIC-2.34□□□□□ -2.78
CCDC58Q4VC31 RNA5SP401-201ENST00000515920 127 ntBASIC-2.34□□□□□ -2.78
CCDC58Q4VC31 RNU6-155P-201ENST00000516347 100 ntBASIC-2.34□□□□□ -2.78
CCDC58Q4VC31 RNU2-31P-201ENST00000516954 155 ntBASIC-2.34□□□□□ -2.78
CCDC58Q4VC31 AL080274.1-201ENST00000605565 220 ntBASIC-2.34□□□□□ -2.78
CCDC58Q4VC31 RNU7-10P-201ENST00000607194 63 ntBASIC-2.34□□□□□ -2.78
CCDC58Q4VC31 MIR6874-201ENST00000635894 71 ntBASIC-2.34□□□□□ -2.78
CCDC58Q4VC31 RNA5SP331-201ENST00000364986 107 ntBASIC-2.35□□□□□ -2.79
CCDC58Q4VC31 RNU6-596P-201ENST00000365395 98 ntBASIC-2.35□□□□□ -2.79
CCDC58Q4VC31 RNU6-297P-201ENST00000384636 107 ntBASIC-2.35□□□□□ -2.79
CCDC58Q4VC31 MIR548H1-201ENST00000408610 102 ntBASIC-2.35□□□□□ -2.79
CCDC58Q4VC31 SNORD18.1-201ENST00000363807 70 ntBASIC-2.36□□□□□ -2.79
CCDC58Q4VC31 RNU6-961P-201ENST00000363893 105 ntBASIC-2.36□□□□□ -2.79
CCDC58Q4VC31 RNU4-20P-201ENST00000365601 151 ntBASIC-2.36□□□□□ -2.79
CCDC58Q4VC31 AC097510.1-201ENST00000510945 133 ntBASIC-2.36□□□□□ -2.79
CCDC58Q4VC31 AC022140.2-201ENST00000623500 188 ntBASIC-2.36□□□□□ -2.79
CCDC58Q4VC31 snoR1.1-201ENST00000628177 80 ntBASIC-2.36□□□□□ -2.79
CCDC58Q4VC31 MIR302B-201ENST00000362188 73 ntBASIC-2.37□□□□□ -2.79
CCDC58Q4VC31 Y_RNA.146-201ENST00000363549 102 ntBASIC-2.37□□□□□ -2.79
CCDC58Q4VC31 SNORD115-23-201ENST00000364461 82 ntBASIC-2.37□□□□□ -2.79
CCDC58Q4VC31 SNORA72.3-201ENST00000365074 132 ntBASIC-2.37□□□□□ -2.79
CCDC58Q4VC31 Y_RNA.436-201ENST00000384097 102 ntBASIC-2.37□□□□□ -2.79
CCDC58Q4VC31 SNORA18-201ENST00000384416 132 ntBASIC-2.37□□□□□ -2.79
CCDC58Q4VC31 Y_RNA.543-201ENST00000384649 107 ntBASIC-2.37□□□□□ -2.79
CCDC58Q4VC31 RNU6-466P-201ENST00000391224 103 ntBASIC-2.37□□□□□ -2.79
CCDC58Q4VC31 RNU6-1086P-201ENST00000410930 100 ntBASIC-2.37□□□□□ -2.79
CCDC58Q4VC31 SNORD42A-201ENST00000459584 64 ntBASIC-2.37□□□□□ -2.79
Retrieved 100 of 98,524 protein–RNA pairs in 194.8 ms