Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 RNU6-365P-201ENST00000517113 106 ntBASIC-0.06□□□□□ -2.42
SSR1P43307 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC-0.06□□□□□ -2.42
SSR1P43307 RN7SL793P-201ENST00000583259 296 ntBASIC-0.06□□□□□ -2.42
SSR1P43307 snoU18.1-201ENST00000629629 71 ntBASIC-0.06□□□□□ -2.42
SSR1P43307 MIR411-201ENST00000362239 96 ntBASIC-0.07□□□□□ -2.42
SSR1P43307 RNU4-90P-201ENST00000362773 141 ntBASIC-0.07□□□□□ -2.42
SSR1P43307 Y_RNA.66-201ENST00000362862 102 ntBASIC-0.07□□□□□ -2.42
SSR1P43307 RNU6-888P-201ENST00000363010 101 ntBASIC-0.07□□□□□ -2.42
SSR1P43307 Y_RNA.440-201ENST00000384120 114 ntBASIC-0.07□□□□□ -2.42
SSR1P43307 MT-TT-201ENST00000387460 66 ntBASIC-0.07□□□□□ -2.42
SSR1P43307 SNORD115-46-201ENST00000390982 71 ntBASIC-0.07□□□□□ -2.42
SSR1P43307 RNU6-1203P-201ENST00000410703 110 ntBASIC-0.07□□□□□ -2.42
SSR1P43307 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.07□□□□□ -2.42
SSR1P43307 MTND5P34-201ENST00000568888 325 ntBASIC-0.07□□□□□ -2.42
SSR1P43307 AC124312.5-201ENST00000604451 268 ntBASIC-0.07□□□□□ -2.42
SSR1P43307 PVT1_3.1-201ENST00000620853 95 ntBASIC-0.07□□□□□ -2.42
SSR1P43307 Y_RNA.31-201ENST00000362574 102 ntBASIC-0.08□□□□□ -2.42
SSR1P43307 SNORD24-201ENST00000383884 75 ntBASIC-0.08□□□□□ -2.42
SSR1P43307 Y_RNA.445-201ENST00000384168 102 ntBASIC-0.08□□□□□ -2.42
SSR1P43307 SNORA72.6-201ENST00000384520 129 ntBASIC-0.08□□□□□ -2.42
SSR1P43307 Y_RNA.541-201ENST00000384640 113 ntBASIC-0.08□□□□□ -2.42
SSR1P43307 Y_RNA.622-201ENST00000411091 108 ntBASIC-0.08□□□□□ -2.42
SSR1P43307 RPL39P25-201ENST00000449384 154 ntBASIC-0.08□□□□□ -2.42
SSR1P43307 RNU7-96P-201ENST00000459535 64 ntBASIC-0.08□□□□□ -2.42
SSR1P43307 RNU6-875P-201ENST00000516488 106 ntBASIC-0.08□□□□□ -2.42
SSR1P43307 RNU6-504P-201ENST00000516568 104 ntBASIC-0.08□□□□□ -2.42
SSR1P43307 AL662814.1-201ENST00000617364 121 ntBASIC-0.08□□□□□ -2.42
SSR1P43307 uc_338.22-201ENST00000622722 187 ntBASIC-0.08□□□□□ -2.42
SSR1P43307 Y_RNA.26-201ENST00000362539 101 ntBASIC-0.09□□□□□ -2.42
SSR1P43307 Y_RNA.229-201ENST00000364347 113 ntBASIC-0.09□□□□□ -2.42
SSR1P43307 Y_RNA.304-201ENST00000365011 112 ntBASIC-0.09□□□□□ -2.42
SSR1P43307 RNU6-806P-201ENST00000365147 105 ntBASIC-0.09□□□□□ -2.42
SSR1P43307 SNORA1-201ENST00000384107 130 ntBASIC-0.09□□□□□ -2.42
SSR1P43307 Y_RNA.526-201ENST00000384572 110 ntBASIC-0.09□□□□□ -2.42
SSR1P43307 RNU6-127P-201ENST00000390897 107 ntBASIC-0.09□□□□□ -2.42
SSR1P43307 Y_RNA.588-201ENST00000391254 102 ntBASIC-0.09□□□□□ -2.42
SSR1P43307 MIR1302-11-201ENST00000408051 138 ntBASIC-0.09□□□□□ -2.42
SSR1P43307 MIR1302-9-201ENST00000408365 138 ntBASIC-0.09□□□□□ -2.42
SSR1P43307 MIR1302-10-201ENST00000408734 138 ntBASIC-0.09□□□□□ -2.42
SSR1P43307 RNA5SP237-201ENST00000410414 113 ntBASIC-0.09□□□□□ -2.42
SSR1P43307 Y_RNA.631-201ENST00000459607 101 ntBASIC-0.09□□□□□ -2.42
SSR1P43307 RNA5SP227-201ENST00000516184 113 ntBASIC-0.09□□□□□ -2.42
SSR1P43307 MIR1302-2-201ENST00000607096 138 ntBASIC-0.09□□□□□ -2.42
SSR1P43307 MIR499B-201ENST00000636498 73 ntBASIC-0.09□□□□□ -2.42
SSR1P43307 MIR371B-201ENST00000638082 66 ntBASIC-0.09□□□□□ -2.42
SSR1P43307 MIR369-201ENST00000362155 70 ntBASIC-0.1□□□□□ -2.43
SSR1P43307 SNORA9.1-201ENST00000362412 131 ntBASIC-0.1□□□□□ -2.43
SSR1P43307 Y_RNA.16-201ENST00000362421 102 ntBASIC-0.1□□□□□ -2.43
SSR1P43307 snoU2_19.2-201ENST00000363024 80 ntBASIC-0.1□□□□□ -2.43
SSR1P43307 Y_RNA.393-201ENST00000383936 102 ntBASIC-0.1□□□□□ -2.43
SSR1P43307 Y_RNA.508-201ENST00000384502 114 ntBASIC-0.1□□□□□ -2.43
SSR1P43307 MIR593-201ENST00000384856 100 ntBASIC-0.1□□□□□ -2.43
SSR1P43307 AC096949.1-201ENST00000412047 152 ntBASIC-0.1□□□□□ -2.43
SSR1P43307 RPL21P38-201ENST00000418090 167 ntBASIC-0.1□□□□□ -2.43
SSR1P43307 MIR4662B-201ENST00000579498 81 ntBASIC-0.1□□□□□ -2.43
SSR1P43307 MIR4491-201ENST00000581087 68 ntBASIC-0.1□□□□□ -2.43
SSR1P43307 MIR4290-201ENST00000583807 95 ntBASIC-0.1□□□□□ -2.43
SSR1P43307 AC006006.1-201ENST00000603082 144 ntBASIC-0.1□□□□□ -2.43
SSR1P43307 MIR6082-201ENST00000613604 109 ntBASIC-0.1□□□□□ -2.43
SSR1P43307 MIR302B-201ENST00000362188 73 ntBASIC-0.11□□□□□ -2.43
SSR1P43307 Y_RNA.70-201ENST00000362886 110 ntBASIC-0.11□□□□□ -2.43
SSR1P43307 RNA5SP325-201ENST00000363756 130 ntBASIC-0.11□□□□□ -2.43
SSR1P43307 Y_RNA.183-201ENST00000363882 113 ntBASIC-0.11□□□□□ -2.43
SSR1P43307 Y_RNA.197-201ENST00000364004 102 ntBASIC-0.11□□□□□ -2.43
SSR1P43307 Y_RNA.351-201ENST00000365436 96 ntBASIC-0.11□□□□□ -2.43
SSR1P43307 RNU6-1189P-201ENST00000383958 107 ntBASIC-0.11□□□□□ -2.43
SSR1P43307 Y_RNA.505-201ENST00000384489 102 ntBASIC-0.11□□□□□ -2.43
SSR1P43307 MIR760-201ENST00000390220 80 ntBASIC-0.11□□□□□ -2.43
SSR1P43307 FGF7P4-201ENST00000509595 295 ntBASIC-0.11□□□□□ -2.43
SSR1P43307 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-0.11□□□□□ -2.43
SSR1P43307 Y_RNA.802-201ENST00000614892 130 ntBASIC-0.11□□□□□ -2.43
SSR1P43307 Y_RNA.634-201ENST00000364811 113 ntBASIC-0.12□□□□□ -2.43
SSR1P43307 RNU6-290P-201ENST00000365212 101 ntBASIC-0.12□□□□□ -2.43
SSR1P43307 RNU6-291P-201ENST00000384720 107 ntBASIC-0.12□□□□□ -2.43
SSR1P43307 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.12□□□□□ -2.43
SSR1P43307 RNU6-823P-201ENST00000391042 103 ntBASIC-0.12□□□□□ -2.43
SSR1P43307 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-0.12□□□□□ -2.43
SSR1P43307 MTND4P19-201ENST00000446659 478 ntBASIC-0.12□□□□□ -2.43
SSR1P43307 SNORA25.16-201ENST00000516741 121 ntBASIC-0.12□□□□□ -2.43
SSR1P43307 MIR4795-201ENST00000584182 89 ntBASIC-0.12□□□□□ -2.43
SSR1P43307 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.12□□□□□ -2.43
SSR1P43307 SNORA25.1-201ENST00000362326 128 ntBASIC-0.13□□□□□ -2.43
SSR1P43307 Y_RNA.217-201ENST00000364214 105 ntBASIC-0.13□□□□□ -2.43
SSR1P43307 Y_RNA.419-201ENST00000384041 102 ntBASIC-0.13□□□□□ -2.43
SSR1P43307 MIR193B-201ENST00000384907 83 ntBASIC-0.13□□□□□ -2.43
SSR1P43307 Y_RNA.581-201ENST00000391017 97 ntBASIC-0.13□□□□□ -2.43
SSR1P43307 Y_RNA.641-201ENST00000459414 105 ntBASIC-0.13□□□□□ -2.43
SSR1P43307 AC090574.1-201ENST00000623186 233 ntBASIC-0.13□□□□□ -2.43
SSR1P43307 AL596211.1-201ENST00000569873 2277 ntBASIC-0.13□□□□□ -2.43
SSR1P43307 Y_RNA.23-201ENST00000362496 106 ntBASIC-0.14□□□□□ -2.43
SSR1P43307 Y_RNA.152-201ENST00000363578 100 ntBASIC-0.14□□□□□ -2.43
SSR1P43307 RNU6-484P-201ENST00000384016 107 ntBASIC-0.14□□□□□ -2.43
SSR1P43307 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-0.14□□□□□ -2.43
SSR1P43307 MTND5P22-201ENST00000458380 195 ntBASIC-0.14□□□□□ -2.43
SSR1P43307 RNU6-453P-201ENST00000516819 85 ntBASIC-0.14□□□□□ -2.43
SSR1P43307 RNA5SP47-201ENST00000517230 109 ntBASIC-0.14□□□□□ -2.43
SSR1P43307 AC141846.1-201ENST00000568348 142 ntBASIC-0.14□□□□□ -2.43
SSR1P43307 MIR3129-201ENST00000581095 76 ntBASIC-0.14□□□□□ -2.43
SSR1P43307 Y_RNA.117-201ENST00000363294 101 ntBASIC-0.15□□□□□ -2.43
SSR1P43307 SNORA2A-201ENST00000383885 135 ntBASIC-0.15□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms