Protein–RNA interactions for Protein: P35625

TIMP3, Metalloproteinase inhibitor 3, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3P35625 SNORD113-1-201ENST00000365321 69 ntBASIC1.29□□□□□ -2.2
TIMP3P35625 Y_RNA.494-201ENST00000384432 111 ntBASIC1.29□□□□□ -2.2
TIMP3P35625 RNU6-1117P-201ENST00000384525 104 ntBASIC1.29□□□□□ -2.2
TIMP3P35625 MIR653-201ENST00000385279 96 ntBASIC1.29□□□□□ -2.2
TIMP3P35625 RNU7-80P-201ENST00000459562 61 ntBASIC1.29□□□□□ -2.2
TIMP3P35625 RNA5SP236-201ENST00000516169 116 ntBASIC1.29□□□□□ -2.2
TIMP3P35625 AC090821.2-201ENST00000523552 176 ntBASIC1.29□□□□□ -2.2
TIMP3P35625 AC090049.2-201ENST00000550377 109 ntBASIC1.29□□□□□ -2.2
TIMP3P35625 AC015688.6-201ENST00000577737 104 ntBASIC1.29□□□□□ -2.2
TIMP3P35625 MIR3121-201ENST00000579680 77 ntBASIC1.29□□□□□ -2.2
TIMP3P35625 MIR548AR-201ENST00000582191 57 ntBASIC1.29□□□□□ -2.2
TIMP3P35625 AL022345.2-201ENST00000606307 135 ntBASIC1.29□□□□□ -2.2
TIMP3P35625 RNU6-508P-201ENST00000363231 103 ntBASIC1.28□□□□□ -2.2
TIMP3P35625 RNU6-1067P-201ENST00000384752 107 ntBASIC1.28□□□□□ -2.2
TIMP3P35625 SNORD28B-201ENST00000390993 75 ntBASIC1.28□□□□□ -2.2
TIMP3P35625 RNA5SP247-201ENST00000411181 105 ntBASIC1.28□□□□□ -2.2
TIMP3P35625 snoU13.9-201ENST00000458927 103 ntBASIC1.28□□□□□ -2.2
TIMP3P35625 AC023790.1-201ENST00000482174 347 ntBASIC1.28□□□□□ -2.2
TIMP3P35625 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.28□□□□□ -2.2
TIMP3P35625 MIR8063-201ENST00000621930 81 ntBASIC1.28□□□□□ -2.2
TIMP3P35625 MIR342-201ENST00000362212 99 ntBASIC1.27□□□□□ -2.21
TIMP3P35625 RNU1-133P-201ENST00000364867 167 ntBASIC1.27□□□□□ -2.21
TIMP3P35625 RNU6-392P-201ENST00000364926 101 ntBASIC1.27□□□□□ -2.21
TIMP3P35625 Y_RNA.327-201ENST00000365201 102 ntBASIC1.27□□□□□ -2.21
TIMP3P35625 Y_RNA.454-201ENST00000384224 113 ntBASIC1.27□□□□□ -2.21
TIMP3P35625 AL451046.2-201ENST00000403074 277 ntBASIC1.27□□□□□ -2.21
TIMP3P35625 SNX2P2-201ENST00000424553 323 ntBASIC1.27□□□□□ -2.21
TIMP3P35625 RNU7-96P-201ENST00000459535 64 ntBASIC1.27□□□□□ -2.21
TIMP3P35625 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.27□□□□□ -2.21
TIMP3P35625 RPS29P24-201ENST00000486345 171 ntBASIC1.27□□□□□ -2.21
TIMP3P35625 RNU6-62P-201ENST00000516526 102 ntBASIC1.27□□□□□ -2.21
TIMP3P35625 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
TIMP3P35625 AL596211.1-201ENST00000569873 2277 ntBASIC1.27□□□□□ -2.21
TIMP3P35625 Y_RNA.71-201ENST00000362892 104 ntBASIC1.26□□□□□ -2.21
TIMP3P35625 Y_RNA.114-201ENST00000363265 113 ntBASIC1.26□□□□□ -2.21
TIMP3P35625 SNORA70.7-201ENST00000384159 133 ntBASIC1.26□□□□□ -2.21
TIMP3P35625 RNU6-80P-201ENST00000384195 107 ntBASIC1.26□□□□□ -2.21
TIMP3P35625 MIR150-201ENST00000385048 84 ntBASIC1.26□□□□□ -2.21
TIMP3P35625 RNU6-955P-201ENST00000410497 104 ntBASIC1.26□□□□□ -2.21
TIMP3P35625 RNU7-67P-201ENST00000459003 62 ntBASIC1.26□□□□□ -2.21
TIMP3P35625 Y_RNA.651-201ENST00000459380 103 ntBASIC1.26□□□□□ -2.21
TIMP3P35625 AC005908.1-201ENST00000468701 347 ntBASIC1.26□□□□□ -2.21
TIMP3P35625 RNU6-1234P-201ENST00000516877 103 ntBASIC1.26□□□□□ -2.21
TIMP3P35625 AL513534.2-201ENST00000603836 250 ntBASIC1.26□□□□□ -2.21
TIMP3P35625 AC091932.4-201ENST00000623386 200 ntBASIC1.26□□□□□ -2.21
TIMP3P35625 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.26□□□□□ -2.21
TIMP3P35625 MIR302B-201ENST00000362188 73 ntBASIC1.25□□□□□ -2.21
TIMP3P35625 Y_RNA.218-201ENST00000364218 104 ntBASIC1.25□□□□□ -2.21
TIMP3P35625 RNU6-22P-201ENST00000384355 107 ntBASIC1.25□□□□□ -2.21
TIMP3P35625 MIR570-201ENST00000384917 97 ntBASIC1.25□□□□□ -2.21
TIMP3P35625 MIR520C-201ENST00000385005 87 ntBASIC1.25□□□□□ -2.21
TIMP3P35625 AL035398.1-201ENST00000430869 322 ntBASIC1.25□□□□□ -2.21
TIMP3P35625 AL158147.1-201ENST00000443970 75 ntBASIC1.25□□□□□ -2.21
TIMP3P35625 RPS29P29-201ENST00000456396 171 ntBASIC1.25□□□□□ -2.21
TIMP3P35625 RNU6-998P-201ENST00000515894 101 ntBASIC1.25□□□□□ -2.21
TIMP3P35625 RNU7-43P-201ENST00000516554 64 ntBASIC1.25□□□□□ -2.21
TIMP3P35625 RNU6-113P-201ENST00000516653 101 ntBASIC1.25□□□□□ -2.21
TIMP3P35625 RNU6-922P-201ENST00000516753 99 ntBASIC1.25□□□□□ -2.21
TIMP3P35625 RNU6-958P-201ENST00000516995 106 ntBASIC1.25□□□□□ -2.21
TIMP3P35625 MIR4764-201ENST00000580680 88 ntBASIC1.25□□□□□ -2.21
TIMP3P35625 MIR4791-201ENST00000607666 84 ntBASIC1.25□□□□□ -2.21
TIMP3P35625 AC243994.1-201ENST00000618627 109 ntBASIC1.25□□□□□ -2.21
TIMP3P35625 AL353770.2-201ENST00000620024 78 ntBASIC1.25□□□□□ -2.21
TIMP3P35625 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.24□□□□□ -2.21
TIMP3P35625 RNU6-235P-201ENST00000362644 107 ntBASIC1.24□□□□□ -2.21
TIMP3P35625 RNU6-647P-201ENST00000364243 107 ntBASIC1.24□□□□□ -2.21
TIMP3P35625 SNORD1A-201ENST00000364968 72 ntBASIC1.24□□□□□ -2.21
TIMP3P35625 Y_RNA.537-201ENST00000384626 109 ntBASIC1.24□□□□□ -2.21
TIMP3P35625 AC008267.6-201ENST00000441664 139 ntBASIC1.24□□□□□ -2.21
TIMP3P35625 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.24□□□□□ -2.21
TIMP3P35625 AC079140.2-201ENST00000506193 142 ntBASIC1.24□□□□□ -2.21
TIMP3P35625 RNU2-13P-201ENST00000515909 113 ntBASIC1.24□□□□□ -2.21
TIMP3P35625 AL157834.3-201ENST00000615543 103 ntBASIC1.24□□□□□ -2.21
TIMP3P35625 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.24□□□□□ -2.21
TIMP3P35625 Y_RNA.127-201ENST00000363386 109 ntBASIC1.23□□□□□ -2.21
TIMP3P35625 Y_RNA.226-201ENST00000364337 114 ntBASIC1.23□□□□□ -2.21
TIMP3P35625 Y_RNA.280-201ENST00000364765 112 ntBASIC1.23□□□□□ -2.21
TIMP3P35625 SNORD116-14-201ENST00000383894 92 ntBASIC1.23□□□□□ -2.21
TIMP3P35625 SNORD116-17-201ENST00000383929 92 ntBASIC1.23□□□□□ -2.21
TIMP3P35625 RNY1P6-201ENST00000384193 109 ntBASIC1.23□□□□□ -2.21
TIMP3P35625 SNORD116-15-201ENST00000384445 92 ntBASIC1.23□□□□□ -2.21
TIMP3P35625 SNORD116-19-201ENST00000384729 92 ntBASIC1.23□□□□□ -2.21
TIMP3P35625 MIR320A-201ENST00000385302 82 ntBASIC1.23□□□□□ -2.21
TIMP3P35625 SNORD41-201ENST00000386967 70 ntBASIC1.23□□□□□ -2.21
TIMP3P35625 MIR548I2-201ENST00000408348 149 ntBASIC1.23□□□□□ -2.21
TIMP3P35625 RNU2-11P-201ENST00000459191 187 ntBASIC1.23□□□□□ -2.21
TIMP3P35625 RNU7-53P-201ENST00000516705 60 ntBASIC1.23□□□□□ -2.21
TIMP3P35625 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.23□□□□□ -2.21
TIMP3P35625 MIR4422-201ENST00000581938 83 ntBASIC1.23□□□□□ -2.21
TIMP3P35625 AL365222.1-201ENST00000614661 98 ntBASIC1.23□□□□□ -2.21
TIMP3P35625 MIR8070-201ENST00000616510 88 ntBASIC1.23□□□□□ -2.21
TIMP3P35625 AC008133.2-201ENST00000624540 351 ntBASIC1.23□□□□□ -2.21
TIMP3P35625 MIR302D-201ENST00000362275 68 ntBASIC1.22□□□□□ -2.21
TIMP3P35625 RNU6-349P-201ENST00000362402 107 ntBASIC1.22□□□□□ -2.21
TIMP3P35625 SNORD33-201ENST00000362761 85 ntBASIC1.22□□□□□ -2.21
TIMP3P35625 RNU6-690P-201ENST00000365242 106 ntBASIC1.22□□□□□ -2.21
TIMP3P35625 SNORA24-201ENST00000384096 131 ntBASIC1.22□□□□□ -2.21
TIMP3P35625 SNORA51.10-201ENST00000384418 136 ntBASIC1.22□□□□□ -2.21
TIMP3P35625 RNU6-1081P-201ENST00000384537 107 ntBASIC1.22□□□□□ -2.21
TIMP3P35625 RNU6-1154P-201ENST00000391001 104 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 322.3 ms