Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 Y_RNA.692-201ENST00000516627 105 ntBASIC1.37□□□□□ -2.19
KRT9P35527 RNU6-1234P-201ENST00000516877 103 ntBASIC1.37□□□□□ -2.19
KRT9P35527 AC131055.1-201ENST00000584626 316 ntBASIC1.37□□□□□ -2.19
KRT9P35527 AC097639.2-201ENST00000603159 172 ntBASIC1.37□□□□□ -2.19
KRT9P35527 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.37□□□□□ -2.19
KRT9P35527 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
KRT9P35527 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
KRT9P35527 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.36□□□□□ -2.19
KRT9P35527 RNY1P11-201ENST00000363759 113 ntBASIC1.36□□□□□ -2.19
KRT9P35527 Y_RNA.218-201ENST00000364218 104 ntBASIC1.36□□□□□ -2.19
KRT9P35527 snoU2-30.1-201ENST00000365012 70 ntBASIC1.36□□□□□ -2.19
KRT9P35527 SNORD116-14-201ENST00000383894 92 ntBASIC1.36□□□□□ -2.19
KRT9P35527 SNORD116-17-201ENST00000383929 92 ntBASIC1.36□□□□□ -2.19
KRT9P35527 SNORD116-15-201ENST00000384445 92 ntBASIC1.36□□□□□ -2.19
KRT9P35527 SNORD116-19-201ENST00000384729 92 ntBASIC1.36□□□□□ -2.19
KRT9P35527 MIR516B2-201ENST00000385190 85 ntBASIC1.36□□□□□ -2.19
KRT9P35527 MIR618-201ENST00000385287 98 ntBASIC1.36□□□□□ -2.19
KRT9P35527 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
KRT9P35527 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.36□□□□□ -2.19
KRT9P35527 AC245047.7-201ENST00000440265 293 ntBASIC1.36□□□□□ -2.19
KRT9P35527 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.36□□□□□ -2.19
KRT9P35527 AC087685.1-201ENST00000587507 141 ntBASIC1.36□□□□□ -2.19
KRT9P35527 AC027335.2-201ENST00000624030 375 ntBASIC1.36□□□□□ -2.19
KRT9P35527 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.35□□□□□ -2.19
KRT9P35527 RNY1P10-201ENST00000363268 113 ntBASIC1.35□□□□□ -2.19
KRT9P35527 Y_RNA.116-201ENST00000363292 103 ntBASIC1.35□□□□□ -2.19
KRT9P35527 Y_RNA.120-201ENST00000363304 110 ntBASIC1.35□□□□□ -2.19
KRT9P35527 SNORA7.1-201ENST00000363750 139 ntBASIC1.35□□□□□ -2.19
KRT9P35527 RNA5SP205-201ENST00000364653 136 ntBASIC1.35□□□□□ -2.19
KRT9P35527 MIR222-201ENST00000384992 110 ntBASIC1.35□□□□□ -2.19
KRT9P35527 RNU6-735P-201ENST00000410612 107 ntBASIC1.35□□□□□ -2.19
KRT9P35527 RNA5SP127-201ENST00000411051 133 ntBASIC1.35□□□□□ -2.19
KRT9P35527 Y_RNA.629-201ENST00000411368 105 ntBASIC1.35□□□□□ -2.19
KRT9P35527 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.35□□□□□ -2.19
KRT9P35527 HMGN2P32-201ENST00000444648 269 ntBASIC1.35□□□□□ -2.19
KRT9P35527 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.35□□□□□ -2.19
KRT9P35527 RNU6-693P-201ENST00000516134 107 ntBASIC1.35□□□□□ -2.19
KRT9P35527 RNU7-40P-201ENST00000516397 64 ntBASIC1.35□□□□□ -2.19
KRT9P35527 Y_RNA.686-201ENST00000516548 134 ntBASIC1.35□□□□□ -2.19
KRT9P35527 SNORA70.22-201ENST00000517160 124 ntBASIC1.35□□□□□ -2.19
KRT9P35527 AC008507.4-201ENST00000585464 127 ntBASIC1.35□□□□□ -2.19
KRT9P35527 AL157834.3-201ENST00000615543 103 ntBASIC1.35□□□□□ -2.19
KRT9P35527 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.35□□□□□ -2.19
KRT9P35527 SNORD14E-201ENST00000364009 85 ntBASIC1.34□□□□□ -2.19
KRT9P35527 Y_RNA.466-201ENST00000384294 113 ntBASIC1.34□□□□□ -2.19
KRT9P35527 MIR624-201ENST00000385217 97 ntBASIC1.34□□□□□ -2.19
KRT9P35527 RNU6-910P-201ENST00000390844 107 ntBASIC1.34□□□□□ -2.19
KRT9P35527 SNORD72-201ENST00000390994 80 ntBASIC1.34□□□□□ -2.19
KRT9P35527 SNORA40.6-201ENST00000391153 128 ntBASIC1.34□□□□□ -2.19
KRT9P35527 MTATP6P21-201ENST00000440681 189 ntBASIC1.34□□□□□ -2.19
KRT9P35527 RNU5E-3P-201ENST00000515913 68 ntBASIC1.34□□□□□ -2.19
KRT9P35527 RN7SKP179-201ENST00000516126 217 ntBASIC1.34□□□□□ -2.19
KRT9P35527 Y_RNA.666-201ENST00000516187 112 ntBASIC1.34□□□□□ -2.19
KRT9P35527 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.34□□□□□ -2.19
KRT9P35527 MIR3129-201ENST00000581095 76 ntBASIC1.34□□□□□ -2.19
KRT9P35527 AL096861.1-201ENST00000610899 123 ntBASIC1.34□□□□□ -2.19
KRT9P35527 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.33□□□□□ -2.2
KRT9P35527 Y_RNA.66-201ENST00000362862 102 ntBASIC1.33□□□□□ -2.2
KRT9P35527 SNORD24-201ENST00000383884 75 ntBASIC1.33□□□□□ -2.2
KRT9P35527 RNU6-442P-201ENST00000383968 104 ntBASIC1.33□□□□□ -2.2
KRT9P35527 SNORD61-201ENST00000384252 73 ntBASIC1.33□□□□□ -2.2
KRT9P35527 MIR136-201ENST00000385207 82 ntBASIC1.33□□□□□ -2.2
KRT9P35527 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.33□□□□□ -2.2
KRT9P35527 Y_RNA.690-201ENST00000516603 95 ntBASIC1.33□□□□□ -2.2
KRT9P35527 RNU6-1270P-201ENST00000517128 108 ntBASIC1.33□□□□□ -2.2
KRT9P35527 AC007751.1-201ENST00000529260 376 ntBASIC1.33□□□□□ -2.2
KRT9P35527 MIR3660-201ENST00000584845 100 ntBASIC1.33□□□□□ -2.2
KRT9P35527 AL365205.2-201ENST00000594586 68 ntBASIC1.33□□□□□ -2.2
KRT9P35527 RNU6-888P-201ENST00000363010 101 ntBASIC1.32□□□□□ -2.2
KRT9P35527 Y_RNA.273-201ENST00000364703 102 ntBASIC1.32□□□□□ -2.2
KRT9P35527 Y_RNA.294-201ENST00000364916 102 ntBASIC1.32□□□□□ -2.2
KRT9P35527 RNU6-1292P-201ENST00000383856 107 ntBASIC1.32□□□□□ -2.2
KRT9P35527 SNORA1-201ENST00000384107 130 ntBASIC1.32□□□□□ -2.2
KRT9P35527 AL603914.1-201ENST00000401964 204 ntBASIC1.32□□□□□ -2.2
KRT9P35527 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.32□□□□□ -2.2
KRT9P35527 RNU6-659P-201ENST00000516454 104 ntBASIC1.32□□□□□ -2.2
KRT9P35527 RNA5SP404-201ENST00000517118 132 ntBASIC1.32□□□□□ -2.2
KRT9P35527 MIR3121-201ENST00000579680 77 ntBASIC1.32□□□□□ -2.2
KRT9P35527 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
KRT9P35527 MIR6734-201ENST00000621166 68 ntBASIC1.32□□□□□ -2.2
KRT9P35527 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.31□□□□□ -2.2
KRT9P35527 RNU6-235P-201ENST00000362644 107 ntBASIC1.31□□□□□ -2.2
KRT9P35527 Y_RNA.353-201ENST00000365440 108 ntBASIC1.31□□□□□ -2.2
KRT9P35527 RNU6-939P-201ENST00000384634 107 ntBASIC1.31□□□□□ -2.2
KRT9P35527 MIR518E-201ENST00000385252 88 ntBASIC1.31□□□□□ -2.2
KRT9P35527 AL158147.1-201ENST00000443970 75 ntBASIC1.31□□□□□ -2.2
KRT9P35527 RNU7-107P-201ENST00000459121 61 ntBASIC1.31□□□□□ -2.2
KRT9P35527 SNORA74.3-201ENST00000517108 154 ntBASIC1.31□□□□□ -2.2
KRT9P35527 AC133485.4-201ENST00000561835 220 ntBASIC1.31□□□□□ -2.2
KRT9P35527 AC138907.4-201ENST00000570107 226 ntBASIC1.31□□□□□ -2.2
KRT9P35527 SNORA4-201ENST00000584302 138 ntBASIC1.31□□□□□ -2.2
KRT9P35527 AL353770.2-201ENST00000620024 78 ntBASIC1.31□□□□□ -2.2
KRT9P35527 Y_RNA.52-201ENST00000362760 96 ntBASIC1.3□□□□□ -2.2
KRT9P35527 Y_RNA.114-201ENST00000363265 113 ntBASIC1.3□□□□□ -2.2
KRT9P35527 RNU6-647P-201ENST00000364243 107 ntBASIC1.3□□□□□ -2.2
KRT9P35527 RNU6-309P-201ENST00000364573 106 ntBASIC1.3□□□□□ -2.2
KRT9P35527 Y_RNA.363-201ENST00000365529 113 ntBASIC1.3□□□□□ -2.2
KRT9P35527 MIR1276-201ENST00000408707 83 ntBASIC1.3□□□□□ -2.2
KRT9P35527 AF228730.3-201ENST00000436691 102 ntBASIC1.3□□□□□ -2.2
KRT9P35527 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 120.7 ms