Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 MIR1278-201ENST00000408753 81 ntBASIC-0.39□□□□□ -2.47
SHOX2O60902 RPL39P25-201ENST00000449384 154 ntBASIC-0.39□□□□□ -2.47
SHOX2O60902 MIR4752-201ENST00000579672 72 ntBASIC-0.39□□□□□ -2.47
SHOX2O60902 MIR3152-201ENST00000579801 74 ntBASIC-0.39□□□□□ -2.47
SHOX2O60902 MIR3165-201ENST00000579874 75 ntBASIC-0.39□□□□□ -2.47
SHOX2O60902 MIR4436A-201ENST00000585278 85 ntBASIC-0.39□□□□□ -2.47
SHOX2O60902 AC124312.5-201ENST00000604451 268 ntBASIC-0.39□□□□□ -2.47
SHOX2O60902 AC011476.5-201ENST00000615594 130 ntBASIC-0.39□□□□□ -2.47
SHOX2O60902 MIR655-201ENST00000362159 97 ntBASIC-0.4□□□□□ -2.47
SHOX2O60902 SNORD114-14-201ENST00000362723 75 ntBASIC-0.4□□□□□ -2.47
SHOX2O60902 Y_RNA.88-201ENST00000363029 99 ntBASIC-0.4□□□□□ -2.47
SHOX2O60902 RNU6-1309P-201ENST00000363305 108 ntBASIC-0.4□□□□□ -2.47
SHOX2O60902 SNORD115-28-201ENST00000363931 81 ntBASIC-0.4□□□□□ -2.47
SHOX2O60902 RNU4-84P-201ENST00000364200 139 ntBASIC-0.4□□□□□ -2.47
SHOX2O60902 RNU6-119P-201ENST00000364882 107 ntBASIC-0.4□□□□□ -2.47
SHOX2O60902 Y_RNA.346-201ENST00000365385 112 ntBASIC-0.4□□□□□ -2.47
SHOX2O60902 RNY3P14-201ENST00000384309 102 ntBASIC-0.4□□□□□ -2.47
SHOX2O60902 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.4□□□□□ -2.47
SHOX2O60902 MIR628-201ENST00000385229 95 ntBASIC-0.4□□□□□ -2.47
SHOX2O60902 MIR548L-201ENST00000408303 86 ntBASIC-0.4□□□□□ -2.47
SHOX2O60902 MTND1P29-201ENST00000448112 647 ntBASIC-0.4□□□□□ -2.47
SHOX2O60902 RPS29P24-201ENST00000486345 171 ntBASIC-0.4□□□□□ -2.47
SHOX2O60902 SNORA31.14-201ENST00000516728 116 ntBASIC-0.4□□□□□ -2.47
SHOX2O60902 RNU6-897P-201ENST00000517135 105 ntBASIC-0.4□□□□□ -2.47
SHOX2O60902 MIR4423-201ENST00000580922 80 ntBASIC-0.4□□□□□ -2.47
SHOX2O60902 DEFB117-201ENST00000602356 141 ntBASIC-0.4□□□□□ -2.47
SHOX2O60902 Y_RNA.331-201ENST00000365267 102 ntBASIC-0.41□□□□□ -2.48
SHOX2O60902 SNORA27-201ENST00000384323 126 ntBASIC-0.41□□□□□ -2.48
SHOX2O60902 SNORD28-201ENST00000384706 75 ntBASIC-0.41□□□□□ -2.48
SHOX2O60902 Y_RNA.605-201ENST00000410577 105 ntBASIC-0.41□□□□□ -2.48
SHOX2O60902 MTND3P8-201ENST00000412909 339 ntBASIC-0.41□□□□□ -2.48
SHOX2O60902 MTATP6P17-201ENST00000431030 672 ntBASIC-0.41□□□□□ -2.48
SHOX2O60902 RNU7-141P-201ENST00000459304 62 ntBASIC-0.41□□□□□ -2.48
SHOX2O60902 RNU6-765P-201ENST00000516916 99 ntBASIC-0.41□□□□□ -2.48
SHOX2O60902 AC138869.1-201ENST00000568623 124 ntBASIC-0.41□□□□□ -2.48
SHOX2O60902 MIR4639-201ENST00000584938 69 ntBASIC-0.41□□□□□ -2.48
SHOX2O60902 TPTEP1-208ENST00000636884 213 ntBASIC-0.41□□□□□ -2.48
SHOX2O60902 Y_RNA.27-201ENST00000362540 103 ntBASIC-0.42□□□□□ -2.48
SHOX2O60902 RNU6-652P-201ENST00000365488 107 ntBASIC-0.42□□□□□ -2.48
SHOX2O60902 Y_RNA.462-201ENST00000384268 102 ntBASIC-0.42□□□□□ -2.48
SHOX2O60902 MIR501-201ENST00000390204 84 ntBASIC-0.42□□□□□ -2.48
SHOX2O60902 RNU4-30P-201ENST00000410245 143 ntBASIC-0.42□□□□□ -2.48
SHOX2O60902 AL138752.1-201ENST00000452964 351 ntBASIC-0.42□□□□□ -2.48
SHOX2O60902 AC131281.1-201ENST00000522984 164 ntBASIC-0.42□□□□□ -2.48
SHOX2O60902 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC-0.42□□□□□ -2.48
SHOX2O60902 MIR3115-201ENST00000577915 68 ntBASIC-0.42□□□□□ -2.48
SHOX2O60902 AC005357.1-201ENST00000588399 301 ntBASIC-0.42□□□□□ -2.48
SHOX2O60902 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.42□□□□□ -2.48
SHOX2O60902 AC022140.2-201ENST00000623500 188 ntBASIC-0.42□□□□□ -2.48
SHOX2O60902 SNORD116-1-201ENST00000384335 95 ntBASIC-0.43□□□□□ -2.48
SHOX2O60902 RNY1P7-201ENST00000384743 110 ntBASIC-0.43□□□□□ -2.48
SHOX2O60902 MIR215-201ENST00000384858 110 ntBASIC-0.43□□□□□ -2.48
SHOX2O60902 SNORD12C-201ENST00000386307 89 ntBASIC-0.43□□□□□ -2.48
SHOX2O60902 RNA5SP163-201ENST00000410304 99 ntBASIC-0.43□□□□□ -2.48
SHOX2O60902 RNU6-1170P-201ENST00000515974 106 ntBASIC-0.43□□□□□ -2.48
SHOX2O60902 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC-0.43□□□□□ -2.48
SHOX2O60902 AL590491.3-201ENST00000610731 82 ntBASIC-0.43□□□□□ -2.48
SHOX2O60902 U2.1-201ENST00000618978 145 ntBASIC-0.43□□□□□ -2.48
SHOX2O60902 U6.92-201ENST00000636464 89 ntBASIC-0.43□□□□□ -2.48
SHOX2O60902 AL669831.3-213ENST00000636676 183 ntBASIC-0.43□□□□□ -2.48
SHOX2O60902 SNORD114-11-201ENST00000363738 75 ntBASIC-0.44□□□□□ -2.48
SHOX2O60902 RNU6-1248P-201ENST00000391096 64 ntBASIC-0.44□□□□□ -2.48
SHOX2O60902 Y_RNA.13-201ENST00000362403 112 ntBASIC-0.45□□□□□ -2.48
SHOX2O60902 RNU6-1138P-201ENST00000365359 106 ntBASIC-0.45□□□□□ -2.48
SHOX2O60902 SNORA72.4-201ENST00000384174 132 ntBASIC-0.45□□□□□ -2.48
SHOX2O60902 SNORD77.3-201ENST00000391113 65 ntBASIC-0.45□□□□□ -2.48
SHOX2O60902 MIR548I3-201ENST00000408378 149 ntBASIC-0.45□□□□□ -2.48
SHOX2O60902 RNU7-169P-201ENST00000459456 61 ntBASIC-0.45□□□□□ -2.48
SHOX2O60902 RNU7-96P-201ENST00000459535 64 ntBASIC-0.45□□□□□ -2.48
SHOX2O60902 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC-0.45□□□□□ -2.48
SHOX2O60902 SCARNA17-201ENST00000516183 144 ntBASIC-0.45□□□□□ -2.48
SHOX2O60902 RNU7-149P-201ENST00000516739 59 ntBASIC-0.45□□□□□ -2.48
SHOX2O60902 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC-0.45□□□□□ -2.48
SHOX2O60902 AC006600.1-201ENST00000572529 153 ntBASIC-0.45□□□□□ -2.48
SHOX2O60902 MIR4662B-201ENST00000579498 81 ntBASIC-0.45□□□□□ -2.48
SHOX2O60902 MIR4432-201ENST00000581823 84 ntBASIC-0.45□□□□□ -2.48
SHOX2O60902 MIR548AD-201ENST00000584780 82 ntBASIC-0.45□□□□□ -2.48
SHOX2O60902 MIR6082-201ENST00000613604 109 ntBASIC-0.45□□□□□ -2.48
SHOX2O60902 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC-0.45□□□□□ -2.48
SHOX2O60902 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC-0.45□□□□□ -2.48
SHOX2O60902 MIR148A-201ENST00000362215 68 ntBASIC-0.46□□□□□ -2.48
SHOX2O60902 Y_RNA.37-201ENST00000362606 108 ntBASIC-0.46□□□□□ -2.48
SHOX2O60902 Y_RNA.41-201ENST00000362646 102 ntBASIC-0.46□□□□□ -2.48
SHOX2O60902 SNORD81.1-201ENST00000363064 77 ntBASIC-0.46□□□□□ -2.48
SHOX2O60902 SNORD83B-201ENST00000386745 93 ntBASIC-0.46□□□□□ -2.48
SHOX2O60902 AC244669.1-204ENST00000621564 178 ntBASIC-0.46□□□□□ -2.48
SHOX2O60902 RNU6-144P-201ENST00000383951 107 ntBASIC-0.47□□□□□ -2.48
SHOX2O60902 Y_RNA.477-201ENST00000384352 108 ntBASIC-0.47□□□□□ -2.48
SHOX2O60902 Y_RNA.588-201ENST00000391254 102 ntBASIC-0.47□□□□□ -2.48
SHOX2O60902 RNA5SP237-201ENST00000410414 113 ntBASIC-0.47□□□□□ -2.48
SHOX2O60902 RNU6-1190P-201ENST00000410811 104 ntBASIC-0.47□□□□□ -2.48
SHOX2O60902 Y_RNA.666-201ENST00000516187 112 ntBASIC-0.47□□□□□ -2.48
SHOX2O60902 RNA5SP470-201ENST00000516463 106 ntBASIC-0.47□□□□□ -2.48
SHOX2O60902 AC024909.2-201ENST00000553035 286 ntBASIC-0.47□□□□□ -2.48
SHOX2O60902 AC011373.1-201ENST00000607270 237 ntBASIC-0.47□□□□□ -2.48
SHOX2O60902 MIR4788-201ENST00000639104 80 ntBASIC-0.47□□□□□ -2.48
SHOX2O60902 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.48□□□□□ -2.49
SHOX2O60902 RNU6-403P-201ENST00000363163 104 ntBASIC-0.48□□□□□ -2.49
SHOX2O60902 SNORA25.7-201ENST00000364375 127 ntBASIC-0.48□□□□□ -2.49
SHOX2O60902 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.48□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 175.3 ms