Protein–RNA interactions for Protein: Q9UQE7

SMC3, Structural maintenance of chromosomes protein 3, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3Q9UQE7 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.62□□□□□ -2.31
SMC3Q9UQE7 RNU7-67P-201ENST00000459003 62 ntBASIC0.62□□□□□ -2.31
SMC3Q9UQE7 RNU6-1007P-201ENST00000516586 107 ntBASIC0.62□□□□□ -2.31
SMC3Q9UQE7 AC037487.3-201ENST00000606668 112 ntBASIC0.62□□□□□ -2.31
SMC3Q9UQE7 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.61□□□□□ -2.31
SMC3Q9UQE7 Y_RNA.23-201ENST00000362496 106 ntBASIC0.61□□□□□ -2.31
SMC3Q9UQE7 Y_RNA.37-201ENST00000362606 108 ntBASIC0.61□□□□□ -2.31
SMC3Q9UQE7 Y_RNA.66-201ENST00000362862 102 ntBASIC0.61□□□□□ -2.31
SMC3Q9UQE7 RNU6-1309P-201ENST00000363305 108 ntBASIC0.61□□□□□ -2.31
SMC3Q9UQE7 SNORD115-28-201ENST00000363931 81 ntBASIC0.61□□□□□ -2.31
SMC3Q9UQE7 Y_RNA.304-201ENST00000365011 112 ntBASIC0.61□□□□□ -2.31
SMC3Q9UQE7 Y_RNA.355-201ENST00000365462 98 ntBASIC0.61□□□□□ -2.31
SMC3Q9UQE7 RNU6-144P-201ENST00000383951 107 ntBASIC0.61□□□□□ -2.31
SMC3Q9UQE7 RNU6-484P-201ENST00000384016 107 ntBASIC0.61□□□□□ -2.31
SMC3Q9UQE7 MIR568-201ENST00000385036 95 ntBASIC0.61□□□□□ -2.31
SMC3Q9UQE7 RNU4-54P-201ENST00000516428 129 ntBASIC0.61□□□□□ -2.31
SMC3Q9UQE7 AC011195.1-201ENST00000578177 177 ntBASIC0.61□□□□□ -2.31
SMC3Q9UQE7 AC020891.4-201ENST00000605745 93 ntBASIC0.61□□□□□ -2.31
SMC3Q9UQE7 U2.14-201ENST00000615943 113 ntBASIC0.61□□□□□ -2.31
SMC3Q9UQE7 RMST_2.1-201ENST00000617263 136 ntBASIC0.61□□□□□ -2.31
SMC3Q9UQE7 MIR6740-201ENST00000618268 113 ntBASIC0.61□□□□□ -2.31
SMC3Q9UQE7 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.61□□□□□ -2.31
SMC3Q9UQE7 MIR8062-201ENST00000621515 85 ntBASIC0.61□□□□□ -2.31
SMC3Q9UQE7 Y_RNA.7-201ENST00000362352 102 ntBASIC0.6□□□□□ -2.31
SMC3Q9UQE7 Y_RNA.242-201ENST00000364473 110 ntBASIC0.6□□□□□ -2.31
SMC3Q9UQE7 RNU6-1138P-201ENST00000365359 106 ntBASIC0.6□□□□□ -2.31
SMC3Q9UQE7 RNU6-1336P-201ENST00000383886 109 ntBASIC0.6□□□□□ -2.31
SMC3Q9UQE7 RNU6-1160P-201ENST00000384546 104 ntBASIC0.6□□□□□ -2.31
SMC3Q9UQE7 RNU6-713P-201ENST00000384761 107 ntBASIC0.6□□□□□ -2.31
SMC3Q9UQE7 Y_RNA.574-201ENST00000384766 95 ntBASIC0.6□□□□□ -2.31
SMC3Q9UQE7 AL606845.1-201ENST00000404881 255 ntBASIC0.6□□□□□ -2.31
SMC3Q9UQE7 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.6□□□□□ -2.31
SMC3Q9UQE7 MIR4771-2-201ENST00000577758 74 ntBASIC0.6□□□□□ -2.31
SMC3Q9UQE7 MIR4771-1-201ENST00000582617 74 ntBASIC0.6□□□□□ -2.31
SMC3Q9UQE7 AC134878.1-201ENST00000619901 243 ntBASIC0.6□□□□□ -2.31
SMC3Q9UQE7 AL365265.1-201ENST00000621045 234 ntBASIC0.6□□□□□ -2.31
SMC3Q9UQE7 Y_RNA.459-201ENST00000384251 102 ntBASIC0.59□□□□□ -2.31
SMC3Q9UQE7 Y_RNA.537-201ENST00000384626 109 ntBASIC0.59□□□□□ -2.31
SMC3Q9UQE7 SNORA8.3-201ENST00000384679 139 ntBASIC0.59□□□□□ -2.31
SMC3Q9UQE7 SNORD12C-201ENST00000386307 89 ntBASIC0.59□□□□□ -2.31
SMC3Q9UQE7 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.59□□□□□ -2.31
SMC3Q9UQE7 RNU6-613P-201ENST00000410412 108 ntBASIC0.59□□□□□ -2.31
SMC3Q9UQE7 MTND1P19-201ENST00000511780 315 ntBASIC0.59□□□□□ -2.31
SMC3Q9UQE7 Y_RNA.680-201ENST00000516441 93 ntBASIC0.59□□□□□ -2.31
SMC3Q9UQE7 MIR2115-201ENST00000516657 100 ntBASIC0.59□□□□□ -2.31
SMC3Q9UQE7 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.59□□□□□ -2.31
SMC3Q9UQE7 AL360085.1-201ENST00000604713 532 ntBASIC0.59□□□□□ -2.31
SMC3Q9UQE7 AC011921.3-201ENST00000605540 361 ntBASIC0.59□□□□□ -2.31
SMC3Q9UQE7 AL442067.1-201ENST00000613261 223 ntBASIC0.59□□□□□ -2.31
SMC3Q9UQE7 AC022709.1-201ENST00000615967 87 ntBASIC0.59□□□□□ -2.31
SMC3Q9UQE7 AC010332.2-201ENST00000613083 1904 ntBASIC0.59□□□□□ -2.32
SMC3Q9UQE7 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.59□□□□□ -2.32
SMC3Q9UQE7 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.58□□□□□ -2.32
SMC3Q9UQE7 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.58□□□□□ -2.32
SMC3Q9UQE7 Y_RNA.47-201ENST00000362697 108 ntBASIC0.58□□□□□ -2.32
SMC3Q9UQE7 Y_RNA.634-201ENST00000364811 113 ntBASIC0.58□□□□□ -2.32
SMC3Q9UQE7 Y_RNA.354-201ENST00000365448 111 ntBASIC0.58□□□□□ -2.32
SMC3Q9UQE7 RNU6-574P-201ENST00000384265 107 ntBASIC0.58□□□□□ -2.32
SMC3Q9UQE7 MIR526A2-201ENST00000390198 65 ntBASIC0.58□□□□□ -2.32
SMC3Q9UQE7 Y_RNA.590-201ENST00000410140 107 ntBASIC0.58□□□□□ -2.32
SMC3Q9UQE7 RNU6-847P-201ENST00000411115 108 ntBASIC0.58□□□□□ -2.32
SMC3Q9UQE7 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.58□□□□□ -2.32
SMC3Q9UQE7 AC244098.3-201ENST00000424803 96 ntBASIC0.58□□□□□ -2.32
SMC3Q9UQE7 SNORD2.1-201ENST00000458762 69 ntBASIC0.58□□□□□ -2.32
SMC3Q9UQE7 Y_RNA.679-201ENST00000516416 91 ntBASIC0.58□□□□□ -2.32
SMC3Q9UQE7 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.58□□□□□ -2.32
SMC3Q9UQE7 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.58□□□□□ -2.32
SMC3Q9UQE7 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.57□□□□□ -2.32
SMC3Q9UQE7 RNA5SP347-201ENST00000362445 119 ntBASIC0.57□□□□□ -2.32
SMC3Q9UQE7 RNU6-653P-201ENST00000363074 106 ntBASIC0.57□□□□□ -2.32
SMC3Q9UQE7 RNA5SP499-201ENST00000363982 119 ntBASIC0.57□□□□□ -2.32
SMC3Q9UQE7 RNU6-923P-201ENST00000364753 107 ntBASIC0.57□□□□□ -2.32
SMC3Q9UQE7 SNORA1.2-201ENST00000365189 134 ntBASIC0.57□□□□□ -2.32
SMC3Q9UQE7 RNU6-396P-201ENST00000365369 105 ntBASIC0.57□□□□□ -2.32
SMC3Q9UQE7 RNA5SP496-201ENST00000391240 109 ntBASIC0.57□□□□□ -2.32
SMC3Q9UQE7 RNU6-493P-201ENST00000391321 108 ntBASIC0.57□□□□□ -2.32
SMC3Q9UQE7 RNA5SP222-201ENST00000411039 105 ntBASIC0.57□□□□□ -2.32
SMC3Q9UQE7 MIR4714-201ENST00000580728 77 ntBASIC0.57□□□□□ -2.32
SMC3Q9UQE7 MIR3129-201ENST00000581095 76 ntBASIC0.57□□□□□ -2.32
SMC3Q9UQE7 AC008608.1-201ENST00000603910 127 ntBASIC0.57□□□□□ -2.32
SMC3Q9UQE7 AP000942.4-201ENST00000604811 241 ntBASIC0.57□□□□□ -2.32
SMC3Q9UQE7 SNORD27-201ENST00000363981 72 ntBASIC0.56□□□□□ -2.32
SMC3Q9UQE7 Y_RNA.199-201ENST00000364014 102 ntBASIC0.56□□□□□ -2.32
SMC3Q9UQE7 RNU1-133P-201ENST00000364867 167 ntBASIC0.56□□□□□ -2.32
SMC3Q9UQE7 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
SMC3Q9UQE7 SNORA27-201ENST00000384323 126 ntBASIC0.56□□□□□ -2.32
SMC3Q9UQE7 SNORD77.3-201ENST00000391113 65 ntBASIC0.56□□□□□ -2.32
SMC3Q9UQE7 RNU6-381P-201ENST00000391259 108 ntBASIC0.56□□□□□ -2.32
SMC3Q9UQE7 MIR1302-6-201ENST00000408466 90 ntBASIC0.56□□□□□ -2.32
SMC3Q9UQE7 MIR1827-201ENST00000408549 66 ntBASIC0.56□□□□□ -2.32
SMC3Q9UQE7 RNU2-70P-201ENST00000410718 179 ntBASIC0.56□□□□□ -2.32
SMC3Q9UQE7 AC023449.1-201ENST00000454464 154 ntBASIC0.56□□□□□ -2.32
SMC3Q9UQE7 RNU2-11P-201ENST00000459191 187 ntBASIC0.56□□□□□ -2.32
SMC3Q9UQE7 RNU6-1143P-201ENST00000516125 104 ntBASIC0.56□□□□□ -2.32
SMC3Q9UQE7 AC018659.1-201ENST00000551083 169 ntBASIC0.56□□□□□ -2.32
SMC3Q9UQE7 MTND5P32-201ENST00000560711 1802 ntBASIC0.55□□□□□ -2.32
SMC3Q9UQE7 MIR1-1-201ENST00000362147 71 ntBASIC0.55□□□□□ -2.32
SMC3Q9UQE7 SNORD115-34-201ENST00000362441 82 ntBASIC0.55□□□□□ -2.32
SMC3Q9UQE7 SNORD115-12-201ENST00000362583 82 ntBASIC0.55□□□□□ -2.32
SMC3Q9UQE7 SNORD115-29-201ENST00000362834 82 ntBASIC0.55□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 194.3 ms