Protein–RNA interactions for Protein: Q99250

SCN2A, Sodium channel protein type 2 subunit alpha, humanhuman

Predictions only

Length 2,005 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2AQ99250 Y_RNA.202-201ENST00000364083 110 ntBASIC0.6□□□□□ -2.31
SCN2AQ99250 Y_RNA.352-201ENST00000365439 102 ntBASIC0.6□□□□□ -2.31
SCN2AQ99250 Y_RNA.494-201ENST00000384432 111 ntBASIC0.6□□□□□ -2.31
SCN2AQ99250 SNORD12-201ENST00000391002 90 ntBASIC0.6□□□□□ -2.31
SCN2AQ99250 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.6□□□□□ -2.31
SCN2AQ99250 FABP5P4-201ENST00000437203 171 ntBASIC0.6□□□□□ -2.31
SCN2AQ99250 RPS29P24-201ENST00000486345 171 ntBASIC0.6□□□□□ -2.31
SCN2AQ99250 SNORD77.4-201ENST00000516158 81 ntBASIC0.6□□□□□ -2.31
SCN2AQ99250 RNA5SP330-201ENST00000517096 96 ntBASIC0.6□□□□□ -2.31
SCN2AQ99250 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.6□□□□□ -2.31
SCN2AQ99250 Y_RNA.47-201ENST00000362697 108 ntBASIC0.59□□□□□ -2.31
SCN2AQ99250 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.59□□□□□ -2.31
SCN2AQ99250 SNORD124-201ENST00000459577 104 ntBASIC0.59□□□□□ -2.31
SCN2AQ99250 PDCD5P2-201ENST00000507570 312 ntBASIC0.59□□□□□ -2.31
SCN2AQ99250 Y_RNA.666-201ENST00000516187 112 ntBASIC0.59□□□□□ -2.31
SCN2AQ99250 DEFB117-201ENST00000602356 141 ntBASIC0.59□□□□□ -2.31
SCN2AQ99250 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.59□□□□□ -2.31
SCN2AQ99250 SNORD45.3-201ENST00000363836 72 ntBASIC0.59□□□□□ -2.32
SCN2AQ99250 Y_RNA.229-201ENST00000364347 113 ntBASIC0.59□□□□□ -2.32
SCN2AQ99250 SNORA26-201ENST00000391286 122 ntBASIC0.59□□□□□ -2.32
SCN2AQ99250 MIR1302-6-201ENST00000408466 90 ntBASIC0.59□□□□□ -2.32
SCN2AQ99250 RPS3AP1-201ENST00000413190 320 ntBASIC0.59□□□□□ -2.32
SCN2AQ99250 HMGN1P33-201ENST00000432945 451 ntBASIC0.59□□□□□ -2.32
SCN2AQ99250 AC092628.1-201ENST00000436250 252 ntBASIC0.59□□□□□ -2.32
SCN2AQ99250 U7.7-201ENST00000459276 60 ntBASIC0.59□□□□□ -2.32
SCN2AQ99250 AC134878.1-201ENST00000619901 243 ntBASIC0.59□□□□□ -2.32
SCN2AQ99250 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
SCN2AQ99250 MIR100-201ENST00000385259 80 ntBASIC0.58□□□□□ -2.32
SCN2AQ99250 MIR526A2-201ENST00000390198 65 ntBASIC0.58□□□□□ -2.32
SCN2AQ99250 MIR802-201ENST00000390235 94 ntBASIC0.58□□□□□ -2.32
SCN2AQ99250 RNU2-13P-201ENST00000515909 113 ntBASIC0.58□□□□□ -2.32
SCN2AQ99250 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.58□□□□□ -2.32
SCN2AQ99250 RNU6-103P-201ENST00000363686 107 ntBASIC0.57□□□□□ -2.32
SCN2AQ99250 RNU6-654P-201ENST00000364373 107 ntBASIC0.57□□□□□ -2.32
SCN2AQ99250 MIR92A1-201ENST00000385233 78 ntBASIC0.57□□□□□ -2.32
SCN2AQ99250 MT-TW-201ENST00000387382 68 ntBASIC0.57□□□□□ -2.32
SCN2AQ99250 AL035398.1-201ENST00000430869 322 ntBASIC0.57□□□□□ -2.32
SCN2AQ99250 MIR4804-201ENST00000581683 73 ntBASIC0.57□□□□□ -2.32
SCN2AQ99250 AC243994.1-201ENST00000618627 109 ntBASIC0.57□□□□□ -2.32
SCN2AQ99250 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
SCN2AQ99250 Y_RNA.237-201ENST00000364439 102 ntBASIC0.57□□□□□ -2.32
SCN2AQ99250 Y_RNA.258-201ENST00000364613 105 ntBASIC0.57□□□□□ -2.32
SCN2AQ99250 SNORA1.1-201ENST00000364671 133 ntBASIC0.57□□□□□ -2.32
SCN2AQ99250 Y_RNA.292-201ENST00000364904 97 ntBASIC0.57□□□□□ -2.32
SCN2AQ99250 RNU6-1237P-201ENST00000384777 107 ntBASIC0.57□□□□□ -2.32
SCN2AQ99250 MIR518F-201ENST00000384973 87 ntBASIC0.57□□□□□ -2.32
SCN2AQ99250 MIR605-201ENST00000385078 83 ntBASIC0.57□□□□□ -2.32
SCN2AQ99250 RNU6-205P-201ENST00000390858 107 ntBASIC0.57□□□□□ -2.32
SCN2AQ99250 RNU6-651P-201ENST00000411040 105 ntBASIC0.57□□□□□ -2.32
SCN2AQ99250 AC087499.4-201ENST00000448505 178 ntBASIC0.57□□□□□ -2.32
SCN2AQ99250 PSMC1P5-201ENST00000512850 177 ntBASIC0.57□□□□□ -2.32
SCN2AQ99250 RNU6-977P-201ENST00000516411 103 ntBASIC0.57□□□□□ -2.32
SCN2AQ99250 MIR8055-201ENST00000610739 97 ntBASIC0.57□□□□□ -2.32
SCN2AQ99250 snoU18.1-201ENST00000629629 71 ntBASIC0.57□□□□□ -2.32
SCN2AQ99250 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.56□□□□□ -2.32
SCN2AQ99250 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
SCN2AQ99250 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.56□□□□□ -2.32
SCN2AQ99250 Y_RNA.117-201ENST00000363294 101 ntBASIC0.56□□□□□ -2.32
SCN2AQ99250 MIR520H-201ENST00000385126 88 ntBASIC0.56□□□□□ -2.32
SCN2AQ99250 AL606490.4-201ENST00000423117 127 ntBASIC0.56□□□□□ -2.32
SCN2AQ99250 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.56□□□□□ -2.32
SCN2AQ99250 RNU7-67P-201ENST00000459003 62 ntBASIC0.56□□□□□ -2.32
SCN2AQ99250 RNU6-327P-201ENST00000516270 127 ntBASIC0.56□□□□□ -2.32
SCN2AQ99250 AC025627.3-201ENST00000582078 182 ntBASIC0.56□□□□□ -2.32
SCN2AQ99250 Y_RNA.178-201ENST00000363832 102 ntBASIC0.55□□□□□ -2.32
SCN2AQ99250 Y_RNA.380-201ENST00000365663 111 ntBASIC0.55□□□□□ -2.32
SCN2AQ99250 Y_RNA.396-201ENST00000383949 103 ntBASIC0.55□□□□□ -2.32
SCN2AQ99250 Y_RNA.422-201ENST00000384054 114 ntBASIC0.55□□□□□ -2.32
SCN2AQ99250 Y_RNA.432-201ENST00000384087 111 ntBASIC0.55□□□□□ -2.32
SCN2AQ99250 RNU6-662P-201ENST00000384253 104 ntBASIC0.55□□□□□ -2.32
SCN2AQ99250 RNU4-70P-201ENST00000384579 139 ntBASIC0.55□□□□□ -2.32
SCN2AQ99250 SNORD38B-201ENST00000384690 67 ntBASIC0.55□□□□□ -2.32
SCN2AQ99250 AL606845.1-201ENST00000404881 255 ntBASIC0.55□□□□□ -2.32
SCN2AQ99250 RPL39P25-201ENST00000449384 154 ntBASIC0.55□□□□□ -2.32
SCN2AQ99250 RNU6-830P-201ENST00000516353 107 ntBASIC0.55□□□□□ -2.32
SCN2AQ99250 Y_RNA.802-201ENST00000614892 130 ntBASIC0.55□□□□□ -2.32
SCN2AQ99250 AC106800.4-201ENST00000614905 153 ntBASIC0.55□□□□□ -2.32
SCN2AQ99250 SNORD38B-202ENST00000625943 69 ntBASIC0.55□□□□□ -2.32
SCN2AQ99250 RNU6-369P-201ENST00000362515 102 ntBASIC0.55□□□□□ -2.32
SCN2AQ99250 Y_RNA.37-201ENST00000362606 108 ntBASIC0.55□□□□□ -2.32
SCN2AQ99250 Y_RNA.199-201ENST00000364014 102 ntBASIC0.55□□□□□ -2.32
SCN2AQ99250 RNU6-818P-201ENST00000364837 108 ntBASIC0.55□□□□□ -2.32
SCN2AQ99250 Y_RNA.569-201ENST00000384749 103 ntBASIC0.55□□□□□ -2.32
SCN2AQ99250 SNORD105-201ENST00000386910 85 ntBASIC0.55□□□□□ -2.32
SCN2AQ99250 RNA5SP95-201ENST00000410319 137 ntBASIC0.55□□□□□ -2.32
SCN2AQ99250 RNU6-994P-201ENST00000410507 111 ntBASIC0.55□□□□□ -2.32
SCN2AQ99250 AC091959.1-201ENST00000495857 238 ntBASIC0.55□□□□□ -2.32
SCN2AQ99250 MTCO2P24-201ENST00000515611 426 ntBASIC0.55□□□□□ -2.32
SCN2AQ99250 Y_RNA.679-201ENST00000516416 91 ntBASIC0.55□□□□□ -2.32
SCN2AQ99250 AC097639.2-201ENST00000603159 172 ntBASIC0.55□□□□□ -2.32
SCN2AQ99250 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.55□□□□□ -2.32
SCN2AQ99250 Y_RNA.176-201ENST00000363815 109 ntBASIC0.54□□□□□ -2.32
SCN2AQ99250 Y_RNA.350-201ENST00000365409 98 ntBASIC0.54□□□□□ -2.32
SCN2AQ99250 RNU6-1189P-201ENST00000383958 107 ntBASIC0.54□□□□□ -2.32
SCN2AQ99250 RNU6-514P-201ENST00000384208 107 ntBASIC0.54□□□□□ -2.32
SCN2AQ99250 RNA5SP193-201ENST00000410353 107 ntBASIC0.54□□□□□ -2.32
SCN2AQ99250 AC244098.3-201ENST00000424803 96 ntBASIC0.54□□□□□ -2.32
SCN2AQ99250 COX6CP6-201ENST00000490840 228 ntBASIC0.54□□□□□ -2.32
SCN2AQ99250 AC133485.1-201ENST00000567176 124 ntBASIC0.54□□□□□ -2.32
SCN2AQ99250 AC138907.6-201ENST00000568401 126 ntBASIC0.54□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 297 ms