Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 Y_RNA.410-201ENST00000383992 113 ntBASIC1.39□□□□□ -2.19
HMGB4Q8WW32 SNORD26-201ENST00000384147 75 ntBASIC1.39□□□□□ -2.19
HMGB4Q8WW32 Y_RNA.494-201ENST00000384432 111 ntBASIC1.39□□□□□ -2.19
HMGB4Q8WW32 Y_RNA.537-201ENST00000384626 109 ntBASIC1.39□□□□□ -2.19
HMGB4Q8WW32 Y_RNA.542-201ENST00000384641 111 ntBASIC1.39□□□□□ -2.19
HMGB4Q8WW32 RNU6-1067P-201ENST00000384752 107 ntBASIC1.39□□□□□ -2.19
HMGB4Q8WW32 MIR570-201ENST00000384917 97 ntBASIC1.39□□□□□ -2.19
HMGB4Q8WW32 AC245047.7-201ENST00000440265 293 ntBASIC1.39□□□□□ -2.19
HMGB4Q8WW32 RNU1-98P-201ENST00000458992 160 ntBASIC1.39□□□□□ -2.19
HMGB4Q8WW32 AC048334.1-201ENST00000477975 159 ntBASIC1.39□□□□□ -2.19
HMGB4Q8WW32 SNORD36C-201ENST00000516733 66 ntBASIC1.39□□□□□ -2.19
HMGB4Q8WW32 RNU6-861P-201ENST00000516745 106 ntBASIC1.39□□□□□ -2.19
HMGB4Q8WW32 AP003484.1-201ENST00000530974 250 ntBASIC1.39□□□□□ -2.19
HMGB4Q8WW32 AL365205.2-201ENST00000594586 68 ntBASIC1.39□□□□□ -2.19
HMGB4Q8WW32 SNORD115-40-201ENST00000606510 82 ntBASIC1.39□□□□□ -2.19
HMGB4Q8WW32 RNA5SP48-201ENST00000363969 126 ntBASIC1.38□□□□□ -2.19
HMGB4Q8WW32 Y_RNA.241-201ENST00000364470 117 ntBASIC1.38□□□□□ -2.19
HMGB4Q8WW32 SNORA40.5-201ENST00000391061 128 ntBASIC1.38□□□□□ -2.19
HMGB4Q8WW32 SNORD77.3-201ENST00000391113 65 ntBASIC1.38□□□□□ -2.19
HMGB4Q8WW32 AC006461.1-201ENST00000412637 326 ntBASIC1.38□□□□□ -2.19
HMGB4Q8WW32 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.38□□□□□ -2.19
HMGB4Q8WW32 SEPT7P4-201ENST00000437076 306 ntBASIC1.38□□□□□ -2.19
HMGB4Q8WW32 RPS26P48-201ENST00000491713 339 ntBASIC1.38□□□□□ -2.19
HMGB4Q8WW32 SNORA31.2-201ENST00000516019 134 ntBASIC1.38□□□□□ -2.19
HMGB4Q8WW32 MIR4791-201ENST00000607666 84 ntBASIC1.38□□□□□ -2.19
HMGB4Q8WW32 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.37□□□□□ -2.19
HMGB4Q8WW32 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
HMGB4Q8WW32 snoU13.18-201ENST00000459483 104 ntBASIC1.37□□□□□ -2.19
HMGB4Q8WW32 AC107297.1-201ENST00000459991 176 ntBASIC1.37□□□□□ -2.19
HMGB4Q8WW32 SNORA18.4-201ENST00000516440 124 ntBASIC1.37□□□□□ -2.19
HMGB4Q8WW32 RNU6-182P-201ENST00000516970 105 ntBASIC1.37□□□□□ -2.19
HMGB4Q8WW32 AC090821.2-201ENST00000523552 176 ntBASIC1.37□□□□□ -2.19
HMGB4Q8WW32 AP003716.2-201ENST00000528260 108 ntBASIC1.37□□□□□ -2.19
HMGB4Q8WW32 MIR3129-201ENST00000581095 76 ntBASIC1.37□□□□□ -2.19
HMGB4Q8WW32 MIR4452-201ENST00000583004 71 ntBASIC1.37□□□□□ -2.19
HMGB4Q8WW32 MIR4251-201ENST00000635819 61 ntBASIC1.37□□□□□ -2.19
HMGB4Q8WW32 RNA5SP327-201ENST00000362494 101 ntBASIC1.36□□□□□ -2.19
HMGB4Q8WW32 RNU6-1292P-201ENST00000383856 107 ntBASIC1.36□□□□□ -2.19
HMGB4Q8WW32 RNU6-1189P-201ENST00000383958 107 ntBASIC1.36□□□□□ -2.19
HMGB4Q8WW32 SNORA24-201ENST00000384096 131 ntBASIC1.36□□□□□ -2.19
HMGB4Q8WW32 SNORA51.10-201ENST00000384418 136 ntBASIC1.36□□□□□ -2.19
HMGB4Q8WW32 MIR489-201ENST00000384923 84 ntBASIC1.36□□□□□ -2.19
HMGB4Q8WW32 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.36□□□□□ -2.19
HMGB4Q8WW32 RPS29P23-201ENST00000458635 123 ntBASIC1.36□□□□□ -2.19
HMGB4Q8WW32 PRELID3BP2-201ENST00000605362 201 ntBASIC1.36□□□□□ -2.19
HMGB4Q8WW32 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.36□□□□□ -2.19
HMGB4Q8WW32 SNORA27-201ENST00000384323 126 ntBASIC1.35□□□□□ -2.19
HMGB4Q8WW32 MIR320A-201ENST00000385302 82 ntBASIC1.35□□□□□ -2.19
HMGB4Q8WW32 RNU5E-9P-201ENST00000411164 104 ntBASIC1.35□□□□□ -2.19
HMGB4Q8WW32 RNU2-64P-201ENST00000411315 191 ntBASIC1.35□□□□□ -2.19
HMGB4Q8WW32 AC107027.2-201ENST00000512197 115 ntBASIC1.35□□□□□ -2.19
HMGB4Q8WW32 Y_RNA.662-201ENST00000516028 97 ntBASIC1.35□□□□□ -2.19
HMGB4Q8WW32 SNORA31.4-201ENST00000516049 129 ntBASIC1.35□□□□□ -2.19
HMGB4Q8WW32 AC243994.1-201ENST00000618627 109 ntBASIC1.35□□□□□ -2.19
HMGB4Q8WW32 MIR376A2-201ENST00000636782 80 ntBASIC1.35□□□□□ -2.19
HMGB4Q8WW32 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.34□□□□□ -2.19
HMGB4Q8WW32 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
HMGB4Q8WW32 RNA5SP264-201ENST00000363115 107 ntBASIC1.34□□□□□ -2.19
HMGB4Q8WW32 SNORA25.3-201ENST00000363205 127 ntBASIC1.34□□□□□ -2.19
HMGB4Q8WW32 Y_RNA.363-201ENST00000365529 113 ntBASIC1.34□□□□□ -2.19
HMGB4Q8WW32 RNU6-597P-201ENST00000365620 102 ntBASIC1.34□□□□□ -2.19
HMGB4Q8WW32 Y_RNA.440-201ENST00000384120 114 ntBASIC1.34□□□□□ -2.19
HMGB4Q8WW32 RPS29P29-201ENST00000456396 171 ntBASIC1.34□□□□□ -2.19
HMGB4Q8WW32 MTND1P7-201ENST00000632801 297 ntBASIC1.34□□□□□ -2.19
HMGB4Q8WW32 AL161722.3-201ENST00000605789 2983 ntBASIC1.34□□□□□ -2.2
HMGB4Q8WW32 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
HMGB4Q8WW32 RNU4-84P-201ENST00000364200 139 ntBASIC1.33□□□□□ -2.2
HMGB4Q8WW32 SNORD114-22-201ENST00000365423 72 ntBASIC1.33□□□□□ -2.2
HMGB4Q8WW32 Y_RNA.357-201ENST00000365487 109 ntBASIC1.33□□□□□ -2.2
HMGB4Q8WW32 SNORA70.7-201ENST00000384159 133 ntBASIC1.33□□□□□ -2.2
HMGB4Q8WW32 RNU6-955P-201ENST00000410497 104 ntBASIC1.33□□□□□ -2.2
HMGB4Q8WW32 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.33□□□□□ -2.2
HMGB4Q8WW32 AC004223.1-201ENST00000479840 271 ntBASIC1.33□□□□□ -2.2
HMGB4Q8WW32 RPS29P24-201ENST00000486345 171 ntBASIC1.33□□□□□ -2.2
HMGB4Q8WW32 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.33□□□□□ -2.2
HMGB4Q8WW32 MIR5197-201ENST00000583721 112 ntBASIC1.33□□□□□ -2.2
HMGB4Q8WW32 SNORA4-201ENST00000584302 138 ntBASIC1.33□□□□□ -2.2
HMGB4Q8WW32 AL078603.1-201ENST00000603824 313 ntBASIC1.33□□□□□ -2.2
HMGB4Q8WW32 SNORA25.7-201ENST00000364375 127 ntBASIC1.32□□□□□ -2.2
HMGB4Q8WW32 Y_RNA.393-201ENST00000383936 102 ntBASIC1.32□□□□□ -2.2
HMGB4Q8WW32 Y_RNA.441-201ENST00000384123 112 ntBASIC1.32□□□□□ -2.2
HMGB4Q8WW32 Y_RNA.521-201ENST00000384560 114 ntBASIC1.32□□□□□ -2.2
HMGB4Q8WW32 MIR624-201ENST00000385217 97 ntBASIC1.32□□□□□ -2.2
HMGB4Q8WW32 RNU6-910P-201ENST00000390844 107 ntBASIC1.32□□□□□ -2.2
HMGB4Q8WW32 RNU6-239P-201ENST00000390990 99 ntBASIC1.32□□□□□ -2.2
HMGB4Q8WW32 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.32□□□□□ -2.2
HMGB4Q8WW32 MIR1185-1-201ENST00000408598 86 ntBASIC1.32□□□□□ -2.2
HMGB4Q8WW32 MIR1302-7-201ENST00000408841 72 ntBASIC1.32□□□□□ -2.2
HMGB4Q8WW32 RNU7-67P-201ENST00000459003 62 ntBASIC1.32□□□□□ -2.2
HMGB4Q8WW32 AL022345.2-201ENST00000606307 135 ntBASIC1.32□□□□□ -2.2
HMGB4Q8WW32 FTX_2.1-201ENST00000618816 94 ntBASIC1.32□□□□□ -2.2
HMGB4Q8WW32 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.31□□□□□ -2.2
HMGB4Q8WW32 Y_RNA.337-201ENST00000365312 102 ntBASIC1.31□□□□□ -2.2
HMGB4Q8WW32 RNU6-768P-201ENST00000384683 107 ntBASIC1.31□□□□□ -2.2
HMGB4Q8WW32 SNORA40.6-201ENST00000391153 128 ntBASIC1.31□□□□□ -2.2
HMGB4Q8WW32 RNA5SP127-201ENST00000411051 133 ntBASIC1.31□□□□□ -2.2
HMGB4Q8WW32 AL392103.1-201ENST00000447000 198 ntBASIC1.31□□□□□ -2.2
HMGB4Q8WW32 AC074198.2-201ENST00000508153 258 ntBASIC1.31□□□□□ -2.2
HMGB4Q8WW32 RNA5SP61-201ENST00000516453 100 ntBASIC1.31□□□□□ -2.2
HMGB4Q8WW32 RNU7-121P-201ENST00000516604 62 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms