Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 MIR4662B-201ENST00000579498 81 ntBASIC0.24□□□□□ -2.37
CDKL3Q8IVW4 MIR8055-201ENST00000610739 97 ntBASIC0.24□□□□□ -2.37
CDKL3Q8IVW4 AC092634.7-201ENST00000621022 103 ntBASIC0.24□□□□□ -2.37
CDKL3Q8IVW4 MIR369-201ENST00000362155 70 ntBASIC0.23□□□□□ -2.37
CDKL3Q8IVW4 Y_RNA.37-201ENST00000362606 108 ntBASIC0.23□□□□□ -2.37
CDKL3Q8IVW4 Y_RNA.105-201ENST00000363182 111 ntBASIC0.23□□□□□ -2.37
CDKL3Q8IVW4 RNU6-450P-201ENST00000364654 107 ntBASIC0.23□□□□□ -2.37
CDKL3Q8IVW4 RNA5SP517-201ENST00000364724 117 ntBASIC0.23□□□□□ -2.37
CDKL3Q8IVW4 MIR518F-201ENST00000384973 87 ntBASIC0.23□□□□□ -2.37
CDKL3Q8IVW4 RNU6-679P-201ENST00000391003 106 ntBASIC0.23□□□□□ -2.37
CDKL3Q8IVW4 Y_RNA.581-201ENST00000391017 97 ntBASIC0.23□□□□□ -2.37
CDKL3Q8IVW4 Y_RNA.645-201ENST00000391229 102 ntBASIC0.23□□□□□ -2.37
CDKL3Q8IVW4 RNU6-1190P-201ENST00000410811 104 ntBASIC0.23□□□□□ -2.37
CDKL3Q8IVW4 RNU6-693P-201ENST00000516134 107 ntBASIC0.23□□□□□ -2.37
CDKL3Q8IVW4 RNU7-53P-201ENST00000516705 60 ntBASIC0.23□□□□□ -2.37
CDKL3Q8IVW4 Y_RNA.804-201ENST00000615262 101 ntBASIC0.23□□□□□ -2.37
CDKL3Q8IVW4 Z97988.1-201ENST00000637697 135 ntBASIC0.23□□□□□ -2.37
CDKL3Q8IVW4 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.22□□□□□ -2.37
CDKL3Q8IVW4 SNORD44.1-201ENST00000363202 61 ntBASIC0.22□□□□□ -2.37
CDKL3Q8IVW4 RNU6-290P-201ENST00000365212 101 ntBASIC0.22□□□□□ -2.37
CDKL3Q8IVW4 RNU6-1327P-201ENST00000365302 105 ntBASIC0.22□□□□□ -2.37
CDKL3Q8IVW4 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.22□□□□□ -2.37
CDKL3Q8IVW4 SNORA27-201ENST00000384323 126 ntBASIC0.22□□□□□ -2.37
CDKL3Q8IVW4 MIR588-201ENST00000384900 83 ntBASIC0.22□□□□□ -2.37
CDKL3Q8IVW4 RNU6-823P-201ENST00000391042 103 ntBASIC0.22□□□□□ -2.37
CDKL3Q8IVW4 Y_RNA.587-201ENST00000391210 103 ntBASIC0.22□□□□□ -2.37
CDKL3Q8IVW4 RNU6-1165P-201ENST00000410119 107 ntBASIC0.22□□□□□ -2.37
CDKL3Q8IVW4 PMCHL1-202ENST00000423102 261 ntBASIC0.22□□□□□ -2.37
CDKL3Q8IVW4 MIR18B-201ENST00000454574 71 ntBASIC0.22□□□□□ -2.37
CDKL3Q8IVW4 RPS29P24-201ENST00000486345 171 ntBASIC0.22□□□□□ -2.37
CDKL3Q8IVW4 MTCO2P24-201ENST00000515611 426 ntBASIC0.22□□□□□ -2.37
CDKL3Q8IVW4 RNU6-863P-201ENST00000515989 104 ntBASIC0.22□□□□□ -2.37
CDKL3Q8IVW4 RNU2-31P-201ENST00000516954 155 ntBASIC0.22□□□□□ -2.37
CDKL3Q8IVW4 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.22□□□□□ -2.37
CDKL3Q8IVW4 MIR4431-201ENST00000579990 94 ntBASIC0.22□□□□□ -2.37
CDKL3Q8IVW4 MIR5093-201ENST00000583199 100 ntBASIC0.22□□□□□ -2.37
CDKL3Q8IVW4 MIR2909-201ENST00000617113 69 ntBASIC0.22□□□□□ -2.37
CDKL3Q8IVW4 AC090971.5-201ENST00000621102 293 ntBASIC0.22□□□□□ -2.37
CDKL3Q8IVW4 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.22□□□□□ -2.37
CDKL3Q8IVW4 SNORA25.1-201ENST00000362326 128 ntBASIC0.21□□□□□ -2.38
CDKL3Q8IVW4 Y_RNA.31-201ENST00000362574 102 ntBASIC0.21□□□□□ -2.38
CDKL3Q8IVW4 RNA5SP257-201ENST00000363023 116 ntBASIC0.21□□□□□ -2.38
CDKL3Q8IVW4 SNORA1.1-201ENST00000364671 133 ntBASIC0.21□□□□□ -2.38
CDKL3Q8IVW4 SNORD24-201ENST00000383884 75 ntBASIC0.21□□□□□ -2.38
CDKL3Q8IVW4 Y_RNA.394-201ENST00000383942 103 ntBASIC0.21□□□□□ -2.38
CDKL3Q8IVW4 RNU6-514P-201ENST00000384208 107 ntBASIC0.21□□□□□ -2.38
CDKL3Q8IVW4 SNORD61-201ENST00000384252 73 ntBASIC0.21□□□□□ -2.38
CDKL3Q8IVW4 RNU6-662P-201ENST00000384253 104 ntBASIC0.21□□□□□ -2.38
CDKL3Q8IVW4 RNU6-364P-201ENST00000384387 107 ntBASIC0.21□□□□□ -2.38
CDKL3Q8IVW4 MIR125B2-201ENST00000385128 89 ntBASIC0.21□□□□□ -2.38
CDKL3Q8IVW4 MT-TD-201ENST00000387419 68 ntBASIC0.21□□□□□ -2.38
CDKL3Q8IVW4 SNORD100-201ENST00000408573 76 ntBASIC0.21□□□□□ -2.38
CDKL3Q8IVW4 MIR1252-201ENST00000408861 65 ntBASIC0.21□□□□□ -2.38
CDKL3Q8IVW4 RNU6-121P-201ENST00000410525 99 ntBASIC0.21□□□□□ -2.38
CDKL3Q8IVW4 MTND4LP30-201ENST00000454092 297 ntBASIC0.21□□□□□ -2.38
CDKL3Q8IVW4 SNORD36C-201ENST00000516733 66 ntBASIC0.21□□□□□ -2.38
CDKL3Q8IVW4 RNU6-1270P-201ENST00000517128 108 ntBASIC0.21□□□□□ -2.38
CDKL3Q8IVW4 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.21□□□□□ -2.38
CDKL3Q8IVW4 AC090897.1-201ENST00000580909 226 ntBASIC0.21□□□□□ -2.38
CDKL3Q8IVW4 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.21□□□□□ -2.38
CDKL3Q8IVW4 AC078938.1-201ENST00000620993 318 ntBASIC0.21□□□□□ -2.38
CDKL3Q8IVW4 RNU6-1309P-201ENST00000363305 108 ntBASIC0.2□□□□□ -2.38
CDKL3Q8IVW4 RNU4-10P-201ENST00000364383 140 ntBASIC0.2□□□□□ -2.38
CDKL3Q8IVW4 RNU4-67P-201ENST00000364569 141 ntBASIC0.2□□□□□ -2.38
CDKL3Q8IVW4 Y_RNA.389-201ENST00000383924 113 ntBASIC0.2□□□□□ -2.38
CDKL3Q8IVW4 Y_RNA.419-201ENST00000384041 102 ntBASIC0.2□□□□□ -2.38
CDKL3Q8IVW4 RNY3P14-201ENST00000384309 102 ntBASIC0.2□□□□□ -2.38
CDKL3Q8IVW4 RNU6-1319P-201ENST00000390855 104 ntBASIC0.2□□□□□ -2.38
CDKL3Q8IVW4 RNU6-747P-201ENST00000390928 104 ntBASIC0.2□□□□□ -2.38
CDKL3Q8IVW4 RNU6-241P-201ENST00000391148 104 ntBASIC0.2□□□□□ -2.38
CDKL3Q8IVW4 RNA5SP63-201ENST00000391225 112 ntBASIC0.2□□□□□ -2.38
CDKL3Q8IVW4 MIR1257-201ENST00000408490 117 ntBASIC0.2□□□□□ -2.38
CDKL3Q8IVW4 RNU6-447P-201ENST00000410293 104 ntBASIC0.2□□□□□ -2.38
CDKL3Q8IVW4 RNU6-101P-201ENST00000410323 104 ntBASIC0.2□□□□□ -2.38
CDKL3Q8IVW4 RNU6-1118P-201ENST00000410382 104 ntBASIC0.2□□□□□ -2.38
CDKL3Q8IVW4 RNU6-1076P-201ENST00000410397 104 ntBASIC0.2□□□□□ -2.38
CDKL3Q8IVW4 RNU6-355P-201ENST00000410427 104 ntBASIC0.2□□□□□ -2.38
CDKL3Q8IVW4 RNU6-791P-201ENST00000410467 104 ntBASIC0.2□□□□□ -2.38
CDKL3Q8IVW4 RNU6-705P-201ENST00000410601 104 ntBASIC0.2□□□□□ -2.38
CDKL3Q8IVW4 RNU6-1100P-201ENST00000410691 104 ntBASIC0.2□□□□□ -2.38
CDKL3Q8IVW4 RNU6-860P-201ENST00000410860 104 ntBASIC0.2□□□□□ -2.38
CDKL3Q8IVW4 RNU6-602P-201ENST00000411155 105 ntBASIC0.2□□□□□ -2.38
CDKL3Q8IVW4 RNU6-1217P-201ENST00000411276 104 ntBASIC0.2□□□□□ -2.38
CDKL3Q8IVW4 RNU6-785P-201ENST00000411324 104 ntBASIC0.2□□□□□ -2.38
CDKL3Q8IVW4 RNU7-102P-201ENST00000458948 62 ntBASIC0.2□□□□□ -2.38
CDKL3Q8IVW4 snoU13.2-201ENST00000459201 104 ntBASIC0.2□□□□□ -2.38
CDKL3Q8IVW4 RNU7-185P-201ENST00000459215 60 ntBASIC0.2□□□□□ -2.38
CDKL3Q8IVW4 SNORA25.12-201ENST00000516202 82 ntBASIC0.2□□□□□ -2.38
CDKL3Q8IVW4 AC100767.1-201ENST00000528178 123 ntBASIC0.2□□□□□ -2.38
CDKL3Q8IVW4 MIR4801-201ENST00000582704 82 ntBASIC0.2□□□□□ -2.38
CDKL3Q8IVW4 AC037487.3-201ENST00000606668 112 ntBASIC0.2□□□□□ -2.38
CDKL3Q8IVW4 SNORA25.18-201ENST00000607153 114 ntBASIC0.2□□□□□ -2.38
CDKL3Q8IVW4 U6.90-201ENST00000614007 104 ntBASIC0.2□□□□□ -2.38
CDKL3Q8IVW4 U6.70-201ENST00000620287 104 ntBASIC0.2□□□□□ -2.38
CDKL3Q8IVW4 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.2□□□□□ -2.38
CDKL3Q8IVW4 snoU2_19.2-201ENST00000363024 80 ntBASIC0.19□□□□□ -2.38
CDKL3Q8IVW4 Y_RNA.251-201ENST00000364551 99 ntBASIC0.19□□□□□ -2.38
CDKL3Q8IVW4 RNU6-326P-201ENST00000365480 107 ntBASIC0.19□□□□□ -2.38
CDKL3Q8IVW4 SNORD42.2-201ENST00000365570 69 ntBASIC0.19□□□□□ -2.38
CDKL3Q8IVW4 Y_RNA.541-201ENST00000384640 113 ntBASIC0.19□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 196.7 ms