Protein–RNA interactions for Protein: Q5VIR6

VPS53, Vacuolar protein sorting-associated protein 53 homolog, humanhuman

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53Q5VIR6 SNORA40.5-201ENST00000391061 128 ntBASIC1.76□□□□□ -2.13
VPS53Q5VIR6 RNA5SP236-201ENST00000516169 116 ntBASIC1.76□□□□□ -2.13
VPS53Q5VIR6 SNORD36C-201ENST00000516733 66 ntBASIC1.76□□□□□ -2.13
VPS53Q5VIR6 SCARNA15-202ENST00000516881 127 ntBASIC1.76□□□□□ -2.13
VPS53Q5VIR6 RNU1-92P-201ENST00000517017 135 ntBASIC1.76□□□□□ -2.13
VPS53Q5VIR6 MIR376A2-201ENST00000636782 80 ntBASIC1.76□□□□□ -2.13
VPS53Q5VIR6 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.76□□□□□ -2.13
VPS53Q5VIR6 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.75□□□□□ -2.13
VPS53Q5VIR6 MIR302D-201ENST00000362275 68 ntBASIC1.75□□□□□ -2.13
VPS53Q5VIR6 SNORD115-34-201ENST00000362441 82 ntBASIC1.75□□□□□ -2.13
VPS53Q5VIR6 SNORD115-12-201ENST00000362583 82 ntBASIC1.75□□□□□ -2.13
VPS53Q5VIR6 SNORD115-29-201ENST00000362834 82 ntBASIC1.75□□□□□ -2.13
VPS53Q5VIR6 SNORD115-9-201ENST00000362912 82 ntBASIC1.75□□□□□ -2.13
VPS53Q5VIR6 SNORD115-21-201ENST00000362963 81 ntBASIC1.75□□□□□ -2.13
VPS53Q5VIR6 SNORD115-14-201ENST00000363090 81 ntBASIC1.75□□□□□ -2.13
VPS53Q5VIR6 SNORD115-13-201ENST00000363358 82 ntBASIC1.75□□□□□ -2.13
VPS53Q5VIR6 SNORD115-41-201ENST00000363608 82 ntBASIC1.75□□□□□ -2.13
VPS53Q5VIR6 SNORD115-11-201ENST00000363616 82 ntBASIC1.75□□□□□ -2.13
VPS53Q5VIR6 SNORD115-5-201ENST00000363633 82 ntBASIC1.75□□□□□ -2.13
VPS53Q5VIR6 SNORD115-39-201ENST00000363694 82 ntBASIC1.75□□□□□ -2.13
VPS53Q5VIR6 SNORD115-4-201ENST00000363810 82 ntBASIC1.75□□□□□ -2.13
VPS53Q5VIR6 SNORD115-16-201ENST00000363887 82 ntBASIC1.75□□□□□ -2.13
VPS53Q5VIR6 SNORD115-6-201ENST00000363942 82 ntBASIC1.75□□□□□ -2.13
VPS53Q5VIR6 SNORD115-42-201ENST00000364273 82 ntBASIC1.75□□□□□ -2.13
VPS53Q5VIR6 SNORD115-15-201ENST00000364809 81 ntBASIC1.75□□□□□ -2.13
VPS53Q5VIR6 SNORD115-1-201ENST00000364961 82 ntBASIC1.75□□□□□ -2.13
VPS53Q5VIR6 SNORD115-26-201ENST00000365067 82 ntBASIC1.75□□□□□ -2.13
VPS53Q5VIR6 SNORD115-10-201ENST00000365073 81 ntBASIC1.75□□□□□ -2.13
VPS53Q5VIR6 SNORA1.2-201ENST00000365189 134 ntBASIC1.75□□□□□ -2.13
VPS53Q5VIR6 SNORA2.2-201ENST00000365473 135 ntBASIC1.75□□□□□ -2.13
VPS53Q5VIR6 SNORD115-43-201ENST00000365503 82 ntBASIC1.75□□□□□ -2.13
VPS53Q5VIR6 SNORD115-36-201ENST00000365629 82 ntBASIC1.75□□□□□ -2.13
VPS53Q5VIR6 Y_RNA.440-201ENST00000384120 114 ntBASIC1.75□□□□□ -2.13
VPS53Q5VIR6 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.75□□□□□ -2.13
VPS53Q5VIR6 U8.17-201ENST00000391292 132 ntBASIC1.75□□□□□ -2.13
VPS53Q5VIR6 Y_RNA.686-201ENST00000516548 134 ntBASIC1.75□□□□□ -2.13
VPS53Q5VIR6 Y_RNA.692-201ENST00000516627 105 ntBASIC1.75□□□□□ -2.13
VPS53Q5VIR6 RNU6-1149P-201ENST00000516810 97 ntBASIC1.75□□□□□ -2.13
VPS53Q5VIR6 AC015688.6-201ENST00000577737 104 ntBASIC1.75□□□□□ -2.13
VPS53Q5VIR6 Y_RNA.757-201ENST00000578934 114 ntBASIC1.75□□□□□ -2.13
VPS53Q5VIR6 SNORD115-40-201ENST00000606510 82 ntBASIC1.75□□□□□ -2.13
VPS53Q5VIR6 MTND5P32-201ENST00000560711 1802 ntBASIC1.75□□□□□ -2.13
VPS53Q5VIR6 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.74□□□□□ -2.13
VPS53Q5VIR6 MIR653-201ENST00000385279 96 ntBASIC1.74□□□□□ -2.13
VPS53Q5VIR6 RNU6-970P-201ENST00000516312 107 ntBASIC1.74□□□□□ -2.13
VPS53Q5VIR6 SUMO2P16-201ENST00000519475 264 ntBASIC1.74□□□□□ -2.13
VPS53Q5VIR6 DNAJC19P9-201ENST00000555084 351 ntBASIC1.74□□□□□ -2.13
VPS53Q5VIR6 AC011603.4-201ENST00000611325 277 ntBASIC1.74□□□□□ -2.13
VPS53Q5VIR6 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.73□□□□□ -2.13
VPS53Q5VIR6 RNU6-1065P-201ENST00000384513 106 ntBASIC1.73□□□□□ -2.13
VPS53Q5VIR6 RNU6-1117P-201ENST00000384525 104 ntBASIC1.73□□□□□ -2.13
VPS53Q5VIR6 MIR513A1-201ENST00000385138 129 ntBASIC1.73□□□□□ -2.13
VPS53Q5VIR6 AL606753.1-201ENST00000427435 87 ntBASIC1.73□□□□□ -2.13
VPS53Q5VIR6 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.73□□□□□ -2.13
VPS53Q5VIR6 Y_RNA.690-201ENST00000516603 95 ntBASIC1.73□□□□□ -2.13
VPS53Q5VIR6 RNU6-971P-201ENST00000516920 106 ntBASIC1.73□□□□□ -2.13
VPS53Q5VIR6 RNU6-902P-201ENST00000517212 91 ntBASIC1.73□□□□□ -2.13
VPS53Q5VIR6 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.73□□□□□ -2.13
VPS53Q5VIR6 AP000942.3-201ENST00000603702 160 ntBASIC1.73□□□□□ -2.13
VPS53Q5VIR6 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.73□□□□□ -2.13
VPS53Q5VIR6 SNORA27-201ENST00000384323 126 ntBASIC1.72□□□□□ -2.13
VPS53Q5VIR6 RNU6-997P-201ENST00000384725 107 ntBASIC1.72□□□□□ -2.13
VPS53Q5VIR6 AC027119.1-201ENST00000440877 241 ntBASIC1.72□□□□□ -2.13
VPS53Q5VIR6 SNORD123-201ENST00000459473 70 ntBASIC1.72□□□□□ -2.13
VPS53Q5VIR6 RNU7-80P-201ENST00000459562 61 ntBASIC1.72□□□□□ -2.13
VPS53Q5VIR6 RNU6-917P-201ENST00000516294 104 ntBASIC1.72□□□□□ -2.13
VPS53Q5VIR6 RNA5SP61-201ENST00000516453 100 ntBASIC1.72□□□□□ -2.13
VPS53Q5VIR6 SNORA31.24-201ENST00000517232 57 ntBASIC1.72□□□□□ -2.13
VPS53Q5VIR6 AC090049.2-201ENST00000550377 109 ntBASIC1.72□□□□□ -2.13
VPS53Q5VIR6 MIR3121-201ENST00000579680 77 ntBASIC1.72□□□□□ -2.13
VPS53Q5VIR6 MIR3937-201ENST00000580135 106 ntBASIC1.72□□□□□ -2.13
VPS53Q5VIR6 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.72□□□□□ -2.13
VPS53Q5VIR6 FAM106DP-201ENST00000586416 501 ntBASIC1.72□□□□□ -2.13
VPS53Q5VIR6 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
VPS53Q5VIR6 AL121890.5-201ENST00000620848 304 ntBASIC1.72□□□□□ -2.13
VPS53Q5VIR6 MIR378A-201ENST00000362177 66 ntBASIC1.71□□□□□ -2.14
VPS53Q5VIR6 Y_RNA.241-201ENST00000364470 117 ntBASIC1.71□□□□□ -2.14
VPS53Q5VIR6 Y_RNA.280-201ENST00000364765 112 ntBASIC1.71□□□□□ -2.14
VPS53Q5VIR6 BTF3P4-201ENST00000418852 495 ntBASIC1.71□□□□□ -2.14
VPS53Q5VIR6 AC107297.1-201ENST00000459991 176 ntBASIC1.71□□□□□ -2.14
VPS53Q5VIR6 RPS26P48-201ENST00000491713 339 ntBASIC1.71□□□□□ -2.14
VPS53Q5VIR6 RNU6-322P-201ENST00000516010 103 ntBASIC1.71□□□□□ -2.14
VPS53Q5VIR6 RNU6-113P-201ENST00000516653 101 ntBASIC1.71□□□□□ -2.14
VPS53Q5VIR6 SNORA18.7-201ENST00000516910 131 ntBASIC1.71□□□□□ -2.14
VPS53Q5VIR6 SNORA74.3-201ENST00000517108 154 ntBASIC1.71□□□□□ -2.14
VPS53Q5VIR6 RNU7-181P-201ENST00000517234 74 ntBASIC1.71□□□□□ -2.14
VPS53Q5VIR6 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.71□□□□□ -2.14
VPS53Q5VIR6 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.71□□□□□ -2.14
VPS53Q5VIR6 RNA5SP259-201ENST00000365541 109 ntBASIC1.7□□□□□ -2.14
VPS53Q5VIR6 RNU6-80P-201ENST00000384195 107 ntBASIC1.7□□□□□ -2.14
VPS53Q5VIR6 Y_RNA.454-201ENST00000384224 113 ntBASIC1.7□□□□□ -2.14
VPS53Q5VIR6 RPS29P29-201ENST00000456396 171 ntBASIC1.7□□□□□ -2.14
VPS53Q5VIR6 RNU6-1211P-201ENST00000459179 105 ntBASIC1.7□□□□□ -2.14
VPS53Q5VIR6 RNU7-95P-201ENST00000459222 64 ntBASIC1.7□□□□□ -2.14
VPS53Q5VIR6 Y_RNA.651-201ENST00000459380 103 ntBASIC1.7□□□□□ -2.14
VPS53Q5VIR6 RNU2-13P-201ENST00000515909 113 ntBASIC1.7□□□□□ -2.14
VPS53Q5VIR6 RNU6-62P-201ENST00000516526 102 ntBASIC1.7□□□□□ -2.14
VPS53Q5VIR6 AC090821.2-201ENST00000523552 176 ntBASIC1.7□□□□□ -2.14
VPS53Q5VIR6 AL022345.2-201ENST00000606307 135 ntBASIC1.7□□□□□ -2.14
VPS53Q5VIR6 AL512598.1-201ENST00000610158 273 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms