Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 SNORD115-21-201ENST00000362963 81 ntBASIC1.1□□□□□ -2.23
CDH11P55287 SNORD115-14-201ENST00000363090 81 ntBASIC1.1□□□□□ -2.23
CDH11P55287 SNORD115-13-201ENST00000363358 82 ntBASIC1.1□□□□□ -2.23
CDH11P55287 SNORD115-41-201ENST00000363608 82 ntBASIC1.1□□□□□ -2.23
CDH11P55287 SNORD115-11-201ENST00000363616 82 ntBASIC1.1□□□□□ -2.23
CDH11P55287 SNORD115-5-201ENST00000363633 82 ntBASIC1.1□□□□□ -2.23
CDH11P55287 SNORD115-39-201ENST00000363694 82 ntBASIC1.1□□□□□ -2.23
CDH11P55287 SNORD115-4-201ENST00000363810 82 ntBASIC1.1□□□□□ -2.23
CDH11P55287 SNORD115-16-201ENST00000363887 82 ntBASIC1.1□□□□□ -2.23
CDH11P55287 SNORD115-6-201ENST00000363942 82 ntBASIC1.1□□□□□ -2.23
CDH11P55287 SNORD115-42-201ENST00000364273 82 ntBASIC1.1□□□□□ -2.23
CDH11P55287 RNU6-312P-201ENST00000364629 107 ntBASIC1.1□□□□□ -2.23
CDH11P55287 SNORD115-15-201ENST00000364809 81 ntBASIC1.1□□□□□ -2.23
CDH11P55287 SNORD115-1-201ENST00000364961 82 ntBASIC1.1□□□□□ -2.23
CDH11P55287 SNORD115-26-201ENST00000365067 82 ntBASIC1.1□□□□□ -2.23
CDH11P55287 SNORD115-10-201ENST00000365073 81 ntBASIC1.1□□□□□ -2.23
CDH11P55287 SNORD115-43-201ENST00000365503 82 ntBASIC1.1□□□□□ -2.23
CDH11P55287 SNORD115-36-201ENST00000365629 82 ntBASIC1.1□□□□□ -2.23
CDH11P55287 RNU6-939P-201ENST00000384634 107 ntBASIC1.1□□□□□ -2.23
CDH11P55287 SNORA40.5-201ENST00000391061 128 ntBASIC1.1□□□□□ -2.23
CDH11P55287 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.1□□□□□ -2.23
CDH11P55287 MIR1185-1-201ENST00000408598 86 ntBASIC1.1□□□□□ -2.23
CDH11P55287 RNU6-794P-201ENST00000517261 64 ntBASIC1.1□□□□□ -2.23
CDH11P55287 AP003484.1-201ENST00000530974 250 ntBASIC1.1□□□□□ -2.23
CDH11P55287 MIR4431-201ENST00000579990 94 ntBASIC1.1□□□□□ -2.23
CDH11P55287 AC072026.1-201ENST00000605023 201 ntBASIC1.1□□□□□ -2.23
CDH11P55287 SNORD115-40-201ENST00000606510 82 ntBASIC1.1□□□□□ -2.23
CDH11P55287 RNA5SP264-201ENST00000363115 107 ntBASIC1.09□□□□□ -2.23
CDH11P55287 RNU6-682P-201ENST00000363843 106 ntBASIC1.09□□□□□ -2.23
CDH11P55287 RNA5SP48-201ENST00000363969 126 ntBASIC1.09□□□□□ -2.23
CDH11P55287 Y_RNA.410-201ENST00000383992 113 ntBASIC1.09□□□□□ -2.23
CDH11P55287 Y_RNA.542-201ENST00000384641 111 ntBASIC1.09□□□□□ -2.23
CDH11P55287 MIR1285-1-201ENST00000408593 84 ntBASIC1.09□□□□□ -2.23
CDH11P55287 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.09□□□□□ -2.23
CDH11P55287 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.09□□□□□ -2.23
CDH11P55287 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.09□□□□□ -2.24
CDH11P55287 Y_RNA.240-201ENST00000364469 95 ntBASIC1.08□□□□□ -2.24
CDH11P55287 RNU6-1292P-201ENST00000383856 107 ntBASIC1.08□□□□□ -2.24
CDH11P55287 Y_RNA.440-201ENST00000384120 114 ntBASIC1.08□□□□□ -2.24
CDH11P55287 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
CDH11P55287 SNORA79-201ENST00000408376 140 ntBASIC1.08□□□□□ -2.24
CDH11P55287 SNORD79.1-201ENST00000516069 84 ntBASIC1.08□□□□□ -2.24
CDH11P55287 SNORD116-25-201ENST00000516517 92 ntBASIC1.08□□□□□ -2.24
CDH11P55287 SNORA81.3-201ENST00000517283 198 ntBASIC1.08□□□□□ -2.24
CDH11P55287 AP002392.1-201ENST00000537692 208 ntBASIC1.08□□□□□ -2.24
CDH11P55287 MIR3671-201ENST00000580455 88 ntBASIC1.08□□□□□ -2.24
CDH11P55287 AL022345.2-201ENST00000606307 135 ntBASIC1.08□□□□□ -2.24
CDH11P55287 AC027335.2-201ENST00000624030 375 ntBASIC1.08□□□□□ -2.24
CDH11P55287 MTND1P7-201ENST00000632801 297 ntBASIC1.08□□□□□ -2.24
CDH11P55287 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.08□□□□□ -2.24
CDH11P55287 MIR4251-201ENST00000635819 61 ntBASIC1.08□□□□□ -2.24
CDH11P55287 Y_RNA.29-201ENST00000362570 113 ntBASIC1.07□□□□□ -2.24
CDH11P55287 SNORA25.3-201ENST00000363205 127 ntBASIC1.07□□□□□ -2.24
CDH11P55287 Y_RNA.241-201ENST00000364470 117 ntBASIC1.07□□□□□ -2.24
CDH11P55287 RNU6-53P-201ENST00000365367 106 ntBASIC1.07□□□□□ -2.24
CDH11P55287 RNU6-1318P-201ENST00000365389 103 ntBASIC1.07□□□□□ -2.24
CDH11P55287 RNU6-910P-201ENST00000390844 107 ntBASIC1.07□□□□□ -2.24
CDH11P55287 RNU5E-9P-201ENST00000411164 104 ntBASIC1.07□□□□□ -2.24
CDH11P55287 Y_RNA.793-201ENST00000411222 111 ntBASIC1.07□□□□□ -2.24
CDH11P55287 MIR548AO-201ENST00000579992 96 ntBASIC1.07□□□□□ -2.24
CDH11P55287 AC004792.1-201ENST00000614523 137 ntBASIC1.07□□□□□ -2.24
CDH11P55287 AC243994.1-201ENST00000618627 109 ntBASIC1.07□□□□□ -2.24
CDH11P55287 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
CDH11P55287 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.06□□□□□ -2.24
CDH11P55287 RNU6-597P-201ENST00000365620 102 ntBASIC1.06□□□□□ -2.24
CDH11P55287 SNORA27-201ENST00000384323 126 ntBASIC1.06□□□□□ -2.24
CDH11P55287 SNORA25-201ENST00000384384 134 ntBASIC1.06□□□□□ -2.24
CDH11P55287 SNORA51.10-201ENST00000384418 136 ntBASIC1.06□□□□□ -2.24
CDH11P55287 SNORA75.2-201ENST00000391138 150 ntBASIC1.06□□□□□ -2.24
CDH11P55287 SNORA75.3-201ENST00000391231 150 ntBASIC1.06□□□□□ -2.24
CDH11P55287 AL591704.2-201ENST00000421658 181 ntBASIC1.06□□□□□ -2.24
CDH11P55287 SEPT7P4-201ENST00000437076 306 ntBASIC1.06□□□□□ -2.24
CDH11P55287 OR2A41P-201ENST00000473586 105 ntBASIC1.06□□□□□ -2.24
CDH11P55287 RNU6-861P-201ENST00000516745 106 ntBASIC1.06□□□□□ -2.24
CDH11P55287 MIR3129-201ENST00000581095 76 ntBASIC1.06□□□□□ -2.24
CDH11P55287 MIR5197-201ENST00000583721 112 ntBASIC1.06□□□□□ -2.24
CDH11P55287 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.06□□□□□ -2.24
CDH11P55287 Y_RNA.224-201ENST00000364308 111 ntBASIC1.05□□□□□ -2.24
CDH11P55287 RNU6-1189P-201ENST00000383958 107 ntBASIC1.05□□□□□ -2.24
CDH11P55287 RNU6-1067P-201ENST00000384752 107 ntBASIC1.05□□□□□ -2.24
CDH11P55287 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
CDH11P55287 RNU2-64P-201ENST00000411315 191 ntBASIC1.05□□□□□ -2.24
CDH11P55287 RNU7-21P-201ENST00000459430 62 ntBASIC1.05□□□□□ -2.24
CDH11P55287 RNU7-121P-201ENST00000516604 62 ntBASIC1.05□□□□□ -2.24
CDH11P55287 RNA5SP102-201ENST00000516865 106 ntBASIC1.05□□□□□ -2.24
CDH11P55287 SNORA70.22-201ENST00000517160 124 ntBASIC1.05□□□□□ -2.24
CDH11P55287 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
CDH11P55287 SNORA25.8-201ENST00000364831 128 ntBASIC1.04□□□□□ -2.24
CDH11P55287 Y_RNA.441-201ENST00000384123 112 ntBASIC1.04□□□□□ -2.24
CDH11P55287 MIR19B1-201ENST00000384829 87 ntBASIC1.04□□□□□ -2.24
CDH11P55287 MIR624-201ENST00000385217 97 ntBASIC1.04□□□□□ -2.24
CDH11P55287 MIR618-201ENST00000385287 98 ntBASIC1.04□□□□□ -2.24
CDH11P55287 SNORD12-201ENST00000391002 90 ntBASIC1.04□□□□□ -2.24
CDH11P55287 MIR1276-201ENST00000408707 83 ntBASIC1.04□□□□□ -2.24
CDH11P55287 AC006461.1-201ENST00000412637 326 ntBASIC1.04□□□□□ -2.24
CDH11P55287 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.04□□□□□ -2.24
CDH11P55287 RNU7-73P-201ENST00000458743 63 ntBASIC1.04□□□□□ -2.24
CDH11P55287 RPS29P24-201ENST00000486345 171 ntBASIC1.04□□□□□ -2.24
CDH11P55287 RPS23P4-201ENST00000487908 423 ntBASIC1.04□□□□□ -2.24
CDH11P55287 RNU11-2P-201ENST00000516898 142 ntBASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 162.2 ms