Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 MIR1302-10-201ENST00000408734 138 ntBASIC0.03□□□□□ -2.4
ZNF140P52738 RNU6-447P-201ENST00000410293 104 ntBASIC0.03□□□□□ -2.4
ZNF140P52738 RNU6-1118P-201ENST00000410382 104 ntBASIC0.03□□□□□ -2.4
ZNF140P52738 RNU6-1076P-201ENST00000410397 104 ntBASIC0.03□□□□□ -2.4
ZNF140P52738 RNU6-355P-201ENST00000410427 104 ntBASIC0.03□□□□□ -2.4
ZNF140P52738 RNU6-791P-201ENST00000410467 104 ntBASIC0.03□□□□□ -2.4
ZNF140P52738 RNU6-705P-201ENST00000410601 104 ntBASIC0.03□□□□□ -2.4
ZNF140P52738 RNU6-1100P-201ENST00000410691 104 ntBASIC0.03□□□□□ -2.4
ZNF140P52738 RNU6-860P-201ENST00000410860 104 ntBASIC0.03□□□□□ -2.4
ZNF140P52738 RNU6-1217P-201ENST00000411276 104 ntBASIC0.03□□□□□ -2.4
ZNF140P52738 RNU6-785P-201ENST00000411324 104 ntBASIC0.03□□□□□ -2.4
ZNF140P52738 PMCHL1-202ENST00000423102 261 ntBASIC0.03□□□□□ -2.4
ZNF140P52738 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC0.03□□□□□ -2.4
ZNF140P52738 AC107297.1-201ENST00000459991 176 ntBASIC0.03□□□□□ -2.4
ZNF140P52738 RNU6-998P-201ENST00000515894 101 ntBASIC0.03□□□□□ -2.4
ZNF140P52738 RNU6-475P-201ENST00000516073 104 ntBASIC0.03□□□□□ -2.4
ZNF140P52738 RNU6-976P-201ENST00000516086 111 ntBASIC0.03□□□□□ -2.4
ZNF140P52738 RNU6-448P-201ENST00000517052 107 ntBASIC0.03□□□□□ -2.4
ZNF140P52738 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC0.03□□□□□ -2.4
ZNF140P52738 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC0.03□□□□□ -2.4
ZNF140P52738 MIR5692C2-201ENST00000577959 77 ntBASIC0.03□□□□□ -2.4
ZNF140P52738 MIR1302-2-201ENST00000607096 138 ntBASIC0.03□□□□□ -2.4
ZNF140P52738 AL008718.3-201ENST00000610217 321 ntBASIC0.03□□□□□ -2.4
ZNF140P52738 U6.90-201ENST00000614007 104 ntBASIC0.03□□□□□ -2.4
ZNF140P52738 AP001282.2-201ENST00000616149 309 ntBASIC0.03□□□□□ -2.4
ZNF140P52738 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.03□□□□□ -2.4
ZNF140P52738 U6.70-201ENST00000620287 104 ntBASIC0.03□□□□□ -2.4
ZNF140P52738 MIR4315-1-201ENST00000636800 73 ntBASIC0.03□□□□□ -2.4
ZNF140P52738 MIR4315-2-201ENST00000640925 73 ntBASIC0.03□□□□□ -2.4
ZNF140P52738 Y_RNA.58-201ENST00000362807 102 ntBASIC0.02□□□□□ -2.41
ZNF140P52738 Y_RNA.112-201ENST00000363250 102 ntBASIC0.02□□□□□ -2.41
ZNF140P52738 Y_RNA.154-201ENST00000363624 102 ntBASIC0.02□□□□□ -2.41
ZNF140P52738 Y_RNA.217-201ENST00000364214 105 ntBASIC0.02□□□□□ -2.41
ZNF140P52738 SNORD114-9-201ENST00000364370 72 ntBASIC0.02□□□□□ -2.41
ZNF140P52738 RNY3P1-201ENST00000365085 102 ntBASIC0.02□□□□□ -2.41
ZNF140P52738 Y_RNA.384-201ENST00000383909 102 ntBASIC0.02□□□□□ -2.41
ZNF140P52738 Y_RNA.440-201ENST00000384120 114 ntBASIC0.02□□□□□ -2.41
ZNF140P52738 Y_RNA.567-201ENST00000384736 106 ntBASIC0.02□□□□□ -2.41
ZNF140P52738 MIR644A-201ENST00000385262 94 ntBASIC0.02□□□□□ -2.41
ZNF140P52738 MT-TF-201ENST00000387314 71 ntBASIC0.02□□□□□ -2.41
ZNF140P52738 RNU6-1248P-201ENST00000391096 64 ntBASIC0.02□□□□□ -2.41
ZNF140P52738 AC073261.1-201ENST00000429409 121 ntBASIC0.02□□□□□ -2.41
ZNF140P52738 AL138752.1-201ENST00000452964 351 ntBASIC0.02□□□□□ -2.41
ZNF140P52738 Y_RNA.641-201ENST00000459414 105 ntBASIC0.02□□□□□ -2.41
ZNF140P52738 Y_RNA.631-201ENST00000459607 101 ntBASIC0.02□□□□□ -2.41
ZNF140P52738 RNU6-693P-201ENST00000516134 107 ntBASIC0.02□□□□□ -2.41
ZNF140P52738 RNU6-875P-201ENST00000516488 106 ntBASIC0.02□□□□□ -2.41
ZNF140P52738 Y_RNA.713-201ENST00000517013 96 ntBASIC0.02□□□□□ -2.41
ZNF140P52738 RNU6-1270P-201ENST00000517128 108 ntBASIC0.02□□□□□ -2.41
ZNF140P52738 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.02□□□□□ -2.41
ZNF140P52738 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.02□□□□□ -2.41
ZNF140P52738 AC112693.2-201ENST00000556538 232 ntBASIC0.02□□□□□ -2.41
ZNF140P52738 MIR7107-201ENST00000611489 80 ntBASIC0.02□□□□□ -2.41
ZNF140P52738 AL138825.1-201ENST00000618587 192 ntBASIC0.02□□□□□ -2.41
ZNF140P52738 uc_338.16-201ENST00000621804 95 ntBASIC0.02□□□□□ -2.41
ZNF140P52738 uc_338.22-201ENST00000622722 187 ntBASIC0.02□□□□□ -2.41
ZNF140P52738 snoU2_19.2-201ENST00000363024 80 ntBASIC0.01□□□□□ -2.41
ZNF140P52738 Y_RNA.197-201ENST00000364004 102 ntBASIC0.01□□□□□ -2.41
ZNF140P52738 SNORA1.1-201ENST00000364671 133 ntBASIC0.01□□□□□ -2.41
ZNF140P52738 Y_RNA.395-201ENST00000383945 109 ntBASIC0.01□□□□□ -2.41
ZNF140P52738 RNU6-484P-201ENST00000384016 107 ntBASIC0.01□□□□□ -2.41
ZNF140P52738 RNY1P4-201ENST00000384595 115 ntBASIC0.01□□□□□ -2.41
ZNF140P52738 Y_RNA.541-201ENST00000384640 113 ntBASIC0.01□□□□□ -2.41
ZNF140P52738 Y_RNA.579-201ENST00000390939 94 ntBASIC0.01□□□□□ -2.41
ZNF140P52738 Y_RNA.581-201ENST00000391017 97 ntBASIC0.01□□□□□ -2.41
ZNF140P52738 Y_RNA.588-201ENST00000391254 102 ntBASIC0.01□□□□□ -2.41
ZNF140P52738 MIR548I3-201ENST00000408378 149 ntBASIC0.01□□□□□ -2.41
ZNF140P52738 Y_RNA.602-201ENST00000410535 92 ntBASIC0.01□□□□□ -2.41
ZNF140P52738 SNORD71-201ENST00000411292 86 ntBASIC0.01□□□□□ -2.41
ZNF140P52738 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.01□□□□□ -2.41
ZNF140P52738 RNU2-11P-201ENST00000459191 187 ntBASIC0.01□□□□□ -2.41
ZNF140P52738 RNU7-45P-201ENST00000459460 63 ntBASIC0.01□□□□□ -2.41
ZNF140P52738 RNU7-53P-201ENST00000516705 60 ntBASIC0.01□□□□□ -2.41
ZNF140P52738 RNU6-897P-201ENST00000517135 105 ntBASIC0.01□□□□□ -2.41
ZNF140P52738 MIR4667-201ENST00000578933 66 ntBASIC0.01□□□□□ -2.41
ZNF140P52738 RNU1-29P-201ENST00000606574 126 ntBASIC0.01□□□□□ -2.41
ZNF140P52738 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.01□□□□□ -2.41
ZNF140P52738 AC006157.1-201ENST00000611750 366 ntBASIC0.01□□□□□ -2.41
ZNF140P52738 MIR376A1-201ENST00000616574 68 ntBASIC0.01□□□□□ -2.41
ZNF140P52738 MIR6828-201ENST00000636181 60 ntBASIC0.01□□□□□ -2.41
ZNF140P52738 AC112487.2-201ENST00000637950 304 ntBASIC0.01□□□□□ -2.41
ZNF140P52738 Y_RNA.32-201ENST00000362589 110 ntBASIC0□□□□□ -2.41
ZNF140P52738 Y_RNA.91-201ENST00000363042 107 ntBASIC0□□□□□ -2.41
ZNF140P52738 SNORA72.1-201ENST00000363485 129 ntBASIC0□□□□□ -2.41
ZNF140P52738 Y_RNA.183-201ENST00000363882 113 ntBASIC0□□□□□ -2.41
ZNF140P52738 Y_RNA.445-201ENST00000384168 102 ntBASIC0□□□□□ -2.41
ZNF140P52738 RNU6-662P-201ENST00000384253 104 ntBASIC0□□□□□ -2.41
ZNF140P52738 Y_RNA.569-201ENST00000384749 103 ntBASIC0□□□□□ -2.41
ZNF140P52738 MIR526A2-201ENST00000390198 65 ntBASIC0□□□□□ -2.41
ZNF140P52738 U8.15-201ENST00000390947 134 ntBASIC0□□□□□ -2.41
ZNF140P52738 MIR548H2-201ENST00000408874 88 ntBASIC0□□□□□ -2.41
ZNF140P52738 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC0□□□□□ -2.41
ZNF140P52738 AC069271.1-201ENST00000445577 156 ntBASIC0□□□□□ -2.41
ZNF140P52738 MTND4P19-201ENST00000446659 478 ntBASIC0□□□□□ -2.41
ZNF140P52738 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0□□□□□ -2.41
ZNF140P52738 MIR6717-201ENST00000622747 73 ntBASIC0□□□□□ -2.41
ZNF140P52738 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0□□□□□ -2.41
ZNF140P52738 Y_RNA.31-201ENST00000362574 102 ntBASIC-0.01□□□□□ -2.41
ZNF140P52738 RNU4-90P-201ENST00000362773 141 ntBASIC-0.01□□□□□ -2.41
ZNF140P52738 SNORA2A-201ENST00000383885 135 ntBASIC-0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms