Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 SNORA1.1-201ENST00000364671 133 ntBASIC0.1□□□□□ -2.39
NCK1P16333 RNU6-763P-201ENST00000390865 106 ntBASIC0.1□□□□□ -2.39
NCK1P16333 RNU6-913P-201ENST00000390913 95 ntBASIC0.1□□□□□ -2.39
NCK1P16333 RNU6-602P-201ENST00000411155 105 ntBASIC0.1□□□□□ -2.39
NCK1P16333 RNU6-938P-201ENST00000411285 103 ntBASIC0.1□□□□□ -2.39
NCK1P16333 MTND1P14-201ENST00000427400 950 ntBASIC0.1□□□□□ -2.39
NCK1P16333 AC015818.7-201ENST00000428754 109 ntBASIC0.1□□□□□ -2.39
NCK1P16333 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.1□□□□□ -2.39
NCK1P16333 AC087499.7-201ENST00000441958 109 ntBASIC0.1□□□□□ -2.39
NCK1P16333 Y_RNA.666-201ENST00000516187 112 ntBASIC0.1□□□□□ -2.39
NCK1P16333 RNU6-448P-201ENST00000517052 107 ntBASIC0.1□□□□□ -2.39
NCK1P16333 MIR4768-201ENST00000585270 74 ntBASIC0.1□□□□□ -2.39
NCK1P16333 uc_338.6-201ENST00000613544 171 ntBASIC0.1□□□□□ -2.39
NCK1P16333 RNA5SP117-201ENST00000365294 118 ntBASIC0.09□□□□□ -2.4
NCK1P16333 SNORA8.2-201ENST00000384372 139 ntBASIC0.09□□□□□ -2.4
NCK1P16333 RNU6-130P-201ENST00000411112 103 ntBASIC0.09□□□□□ -2.4
NCK1P16333 HMGN1P33-201ENST00000432945 451 ntBASIC0.09□□□□□ -2.4
NCK1P16333 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC0.09□□□□□ -2.4
NCK1P16333 RNU7-96P-201ENST00000459535 64 ntBASIC0.09□□□□□ -2.4
NCK1P16333 Y_RNA.661-201ENST00000516003 99 ntBASIC0.09□□□□□ -2.4
NCK1P16333 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC0.09□□□□□ -2.4
NCK1P16333 AC069113.3-201ENST00000521019 150 ntBASIC0.09□□□□□ -2.4
NCK1P16333 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.09□□□□□ -2.4
NCK1P16333 AC008608.1-201ENST00000603910 127 ntBASIC0.09□□□□□ -2.4
NCK1P16333 PART1_1.1-201ENST00000611761 217 ntBASIC0.09□□□□□ -2.4
NCK1P16333 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.09□□□□□ -2.4
NCK1P16333 RNU4-90P-201ENST00000362773 141 ntBASIC0.08□□□□□ -2.4
NCK1P16333 MIR518F-201ENST00000384973 87 ntBASIC0.08□□□□□ -2.4
NCK1P16333 Y_RNA.637-201ENST00000459424 114 ntBASIC0.08□□□□□ -2.4
NCK1P16333 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC0.08□□□□□ -2.4
NCK1P16333 MIR5692C2-201ENST00000577959 77 ntBASIC0.08□□□□□ -2.4
NCK1P16333 MIR3678-201ENST00000578455 94 ntBASIC0.08□□□□□ -2.4
NCK1P16333 MIR4724-201ENST00000579485 89 ntBASIC0.08□□□□□ -2.4
NCK1P16333 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.08□□□□□ -2.4
NCK1P16333 MIR30D-201ENST00000362283 70 ntBASIC0.07□□□□□ -2.4
NCK1P16333 MIR367-201ENST00000362299 68 ntBASIC0.07□□□□□ -2.4
NCK1P16333 RNU6-888P-201ENST00000363010 101 ntBASIC0.07□□□□□ -2.4
NCK1P16333 SNORA42.1-201ENST00000363515 137 ntBASIC0.07□□□□□ -2.4
NCK1P16333 Y_RNA.183-201ENST00000363882 113 ntBASIC0.07□□□□□ -2.4
NCK1P16333 Y_RNA.445-201ENST00000384168 102 ntBASIC0.07□□□□□ -2.4
NCK1P16333 Y_RNA.486-201ENST00000384398 107 ntBASIC0.07□□□□□ -2.4
NCK1P16333 MIR526A2-201ENST00000390198 65 ntBASIC0.07□□□□□ -2.4
NCK1P16333 SNORD77.3-201ENST00000391113 65 ntBASIC0.07□□□□□ -2.4
NCK1P16333 Y_RNA.631-201ENST00000459607 101 ntBASIC0.07□□□□□ -2.4
NCK1P16333 TRBVB-201ENST00000477100 408 ntBASIC0.07□□□□□ -2.4
NCK1P16333 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.07□□□□□ -2.4
NCK1P16333 MTCO2P24-201ENST00000515611 426 ntBASIC0.07□□□□□ -2.4
NCK1P16333 Y_RNA.715-201ENST00000517082 110 ntBASIC0.07□□□□□ -2.4
NCK1P16333 AP003733.2-201ENST00000529409 171 ntBASIC0.07□□□□□ -2.4
NCK1P16333 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.07□□□□□ -2.4
NCK1P16333 MIR4305-201ENST00000583252 102 ntBASIC0.07□□□□□ -2.4
NCK1P16333 MIR371B-201ENST00000638082 66 ntBASIC0.07□□□□□ -2.4
NCK1P16333 SNORD113-8-201ENST00000363497 74 ntBASIC0.06□□□□□ -2.4
NCK1P16333 Y_RNA.410-201ENST00000383992 113 ntBASIC0.06□□□□□ -2.4
NCK1P16333 Y_RNA.569-201ENST00000384749 103 ntBASIC0.06□□□□□ -2.4
NCK1P16333 SNORD115-46-201ENST00000390982 71 ntBASIC0.06□□□□□ -2.4
NCK1P16333 RNU6-693P-201ENST00000516134 107 ntBASIC0.06□□□□□ -2.4
NCK1P16333 AC131281.1-201ENST00000522984 164 ntBASIC0.06□□□□□ -2.4
NCK1P16333 AC112693.2-201ENST00000556538 232 ntBASIC0.06□□□□□ -2.4
NCK1P16333 AL049861.1-201ENST00000603130 150 ntBASIC0.06□□□□□ -2.4
NCK1P16333 MIR548A2-201ENST00000384956 97 ntBASIC0.05□□□□□ -2.4
NCK1P16333 SNORA26-201ENST00000391286 122 ntBASIC0.05□□□□□ -2.4
NCK1P16333 RNU2-59P-201ENST00000410482 191 ntBASIC0.05□□□□□ -2.4
NCK1P16333 RNU6-383P-201ENST00000410864 94 ntBASIC0.05□□□□□ -2.4
NCK1P16333 HSPE1P25-201ENST00000455484 251 ntBASIC0.05□□□□□ -2.4
NCK1P16333 RNU6-998P-201ENST00000515894 101 ntBASIC0.05□□□□□ -2.4
NCK1P16333 RNU6-848P-201ENST00000515948 107 ntBASIC0.05□□□□□ -2.4
NCK1P16333 RNU6-617P-201ENST00000516147 107 ntBASIC0.05□□□□□ -2.4
NCK1P16333 RNU6-473P-201ENST00000516164 107 ntBASIC0.05□□□□□ -2.4
NCK1P16333 RNU6-1049P-201ENST00000516414 107 ntBASIC0.05□□□□□ -2.4
NCK1P16333 RNU6-504P-201ENST00000516568 104 ntBASIC0.05□□□□□ -2.4
NCK1P16333 RNA5SP285-201ENST00000516619 119 ntBASIC0.05□□□□□ -2.4
NCK1P16333 RNU6-365P-201ENST00000517113 106 ntBASIC0.05□□□□□ -2.4
NCK1P16333 RAC1P9-201ENST00000604990 392 ntBASIC0.05□□□□□ -2.4
NCK1P16333 AC122108.2-201ENST00000611946 526 ntBASIC0.05□□□□□ -2.4
NCK1P16333 MIR376A1-201ENST00000616574 68 ntBASIC0.05□□□□□ -2.4
NCK1P16333 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.04□□□□□ -2.4
NCK1P16333 RNU6-1272P-201ENST00000362776 107 ntBASIC0.04□□□□□ -2.4
NCK1P16333 Y_RNA.197-201ENST00000364004 102 ntBASIC0.04□□□□□ -2.4
NCK1P16333 Y_RNA.412-201ENST00000384001 104 ntBASIC0.04□□□□□ -2.4
NCK1P16333 RNA5SP261-201ENST00000410536 106 ntBASIC0.04□□□□□ -2.4
NCK1P16333 RNU2-55P-201ENST00000411146 174 ntBASIC0.04□□□□□ -2.4
NCK1P16333 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.04□□□□□ -2.4
NCK1P16333 RNU6-135P-201ENST00000516769 101 ntBASIC0.04□□□□□ -2.4
NCK1P16333 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.04□□□□□ -2.4
NCK1P16333 MIR5190-201ENST00000581537 80 ntBASIC0.04□□□□□ -2.4
NCK1P16333 MIR6718-201ENST00000616153 80 ntBASIC0.04□□□□□ -2.4
NCK1P16333 MIR2909-201ENST00000617113 69 ntBASIC0.04□□□□□ -2.4
NCK1P16333 Y_RNA.80-201ENST00000362996 102 ntBASIC0.03□□□□□ -2.4
NCK1P16333 Y_RNA.424-201ENST00000384063 103 ntBASIC0.03□□□□□ -2.4
NCK1P16333 Y_RNA.485-201ENST00000384395 102 ntBASIC0.03□□□□□ -2.4
NCK1P16333 Y_RNA.581-201ENST00000391017 97 ntBASIC0.03□□□□□ -2.4
NCK1P16333 MIR548I3-201ENST00000408378 149 ntBASIC0.03□□□□□ -2.4
NCK1P16333 AC073261.1-201ENST00000429409 121 ntBASIC0.03□□□□□ -2.4
NCK1P16333 AC100767.1-201ENST00000528178 123 ntBASIC0.03□□□□□ -2.4
NCK1P16333 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.03□□□□□ -2.4
NCK1P16333 SNORA25.18-201ENST00000607153 114 ntBASIC0.03□□□□□ -2.4
NCK1P16333 AC090574.1-201ENST00000623186 233 ntBASIC0.03□□□□□ -2.4
NCK1P16333 Y_RNA.263-201ENST00000364659 114 ntBASIC0.02□□□□□ -2.41
NCK1P16333 Y_RNA.315-201ENST00000365117 102 ntBASIC0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms