Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 Y_RNA.787-201ENST00000616522 101 ntBASIC0.43□□□□□ -2.34
COL11A1P12107 Y_RNA.780-201ENST00000617336 101 ntBASIC0.43□□□□□ -2.34
COL11A1P12107 Y_RNA.801-201ENST00000619005 101 ntBASIC0.43□□□□□ -2.34
COL11A1P12107 SNORD115-28-201ENST00000363931 81 ntBASIC0.42□□□□□ -2.34
COL11A1P12107 Y_RNA.276-201ENST00000364732 109 ntBASIC0.42□□□□□ -2.34
COL11A1P12107 Y_RNA.634-201ENST00000364811 113 ntBASIC0.42□□□□□ -2.34
COL11A1P12107 RNU6-326P-201ENST00000365480 107 ntBASIC0.42□□□□□ -2.34
COL11A1P12107 SNORA24-201ENST00000384096 131 ntBASIC0.42□□□□□ -2.34
COL11A1P12107 Y_RNA.494-201ENST00000384432 111 ntBASIC0.42□□□□□ -2.34
COL11A1P12107 SNORA80D-201ENST00000384488 135 ntBASIC0.42□□□□□ -2.34
COL11A1P12107 Y_RNA.512-201ENST00000384518 102 ntBASIC0.42□□□□□ -2.34
COL11A1P12107 SNORA2B-201ENST00000384583 137 ntBASIC0.42□□□□□ -2.34
COL11A1P12107 Y_RNA.549-201ENST00000384657 102 ntBASIC0.42□□□□□ -2.34
COL11A1P12107 Y_RNA.569-201ENST00000384749 103 ntBASIC0.42□□□□□ -2.34
COL11A1P12107 SNORD89-201ENST00000390981 114 ntBASIC0.42□□□□□ -2.34
COL11A1P12107 SNORD99-201ENST00000408612 74 ntBASIC0.42□□□□□ -2.34
COL11A1P12107 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.42□□□□□ -2.34
COL11A1P12107 HMGN2P32-201ENST00000444648 269 ntBASIC0.42□□□□□ -2.34
COL11A1P12107 RNU2-11P-201ENST00000459191 187 ntBASIC0.42□□□□□ -2.34
COL11A1P12107 MIR4643-201ENST00000577473 78 ntBASIC0.42□□□□□ -2.34
COL11A1P12107 AL021707.8-201ENST00000609428 183 ntBASIC0.42□□□□□ -2.34
COL11A1P12107 AL391903.3-201ENST00000612158 163 ntBASIC0.42□□□□□ -2.34
COL11A1P12107 AC134878.1-201ENST00000619901 243 ntBASIC0.42□□□□□ -2.34
COL11A1P12107 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.42□□□□□ -2.34
COL11A1P12107 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.42□□□□□ -2.34
COL11A1P12107 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.41□□□□□ -2.34
COL11A1P12107 SNORA63-201ENST00000363450 132 ntBASIC0.41□□□□□ -2.34
COL11A1P12107 Y_RNA.176-201ENST00000363815 109 ntBASIC0.41□□□□□ -2.34
COL11A1P12107 RNU6-694P-201ENST00000364071 147 ntBASIC0.41□□□□□ -2.34
COL11A1P12107 RNU6-740P-201ENST00000364734 105 ntBASIC0.41□□□□□ -2.34
COL11A1P12107 Y_RNA.292-201ENST00000364904 97 ntBASIC0.41□□□□□ -2.34
COL11A1P12107 Y_RNA.293-201ENST00000364908 93 ntBASIC0.41□□□□□ -2.34
COL11A1P12107 MIR570-201ENST00000384917 97 ntBASIC0.41□□□□□ -2.34
COL11A1P12107 RNA5SP496-201ENST00000391240 109 ntBASIC0.41□□□□□ -2.34
COL11A1P12107 Y_RNA.621-201ENST00000411065 96 ntBASIC0.41□□□□□ -2.34
COL11A1P12107 SNRPGP8-201ENST00000454064 226 ntBASIC0.41□□□□□ -2.34
COL11A1P12107 SNORD2.1-201ENST00000458762 69 ntBASIC0.41□□□□□ -2.34
COL11A1P12107 RNU6-327P-201ENST00000516270 127 ntBASIC0.41□□□□□ -2.34
COL11A1P12107 AL049861.1-201ENST00000603130 150 ntBASIC0.41□□□□□ -2.34
COL11A1P12107 MIR8055-201ENST00000610739 97 ntBASIC0.41□□□□□ -2.34
COL11A1P12107 AL096861.1-201ENST00000610899 123 ntBASIC0.41□□□□□ -2.34
COL11A1P12107 MIR103A2-201ENST00000362154 78 ntBASIC0.41□□□□□ -2.34
COL11A1P12107 RNA5SP264-201ENST00000363115 107 ntBASIC0.41□□□□□ -2.34
COL11A1P12107 RNU6-1205P-201ENST00000363625 106 ntBASIC0.41□□□□□ -2.34
COL11A1P12107 Y_RNA.217-201ENST00000364214 105 ntBASIC0.41□□□□□ -2.34
COL11A1P12107 Y_RNA.229-201ENST00000364347 113 ntBASIC0.41□□□□□ -2.34
COL11A1P12107 RNU4-67P-201ENST00000364569 141 ntBASIC0.41□□□□□ -2.34
COL11A1P12107 SNORD72-201ENST00000390994 80 ntBASIC0.41□□□□□ -2.34
COL11A1P12107 snoU13.16-201ENST00000459350 104 ntBASIC0.41□□□□□ -2.34
COL11A1P12107 Y_RNA.641-201ENST00000459414 105 ntBASIC0.41□□□□□ -2.34
COL11A1P12107 NDUFA4P2-201ENST00000489989 244 ntBASIC0.41□□□□□ -2.34
COL11A1P12107 RNU6-1045P-201ENST00000516321 107 ntBASIC0.41□□□□□ -2.34
COL11A1P12107 MIR4264-201ENST00000583520 66 ntBASIC0.41□□□□□ -2.34
COL11A1P12107 MIR4791-201ENST00000607666 84 ntBASIC0.41□□□□□ -2.34
COL11A1P12107 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.41□□□□□ -2.34
COL11A1P12107 Y_RNA.14-201ENST00000362415 103 ntBASIC0.4□□□□□ -2.35
COL11A1P12107 RNU6-1138P-201ENST00000365359 106 ntBASIC0.4□□□□□ -2.35
COL11A1P12107 Y_RNA.352-201ENST00000365439 102 ntBASIC0.4□□□□□ -2.35
COL11A1P12107 Y_RNA.376-201ENST00000365638 108 ntBASIC0.4□□□□□ -2.35
COL11A1P12107 Y_RNA.483-201ENST00000384380 101 ntBASIC0.4□□□□□ -2.35
COL11A1P12107 RNU4-70P-201ENST00000384579 139 ntBASIC0.4□□□□□ -2.35
COL11A1P12107 RNU6-1237P-201ENST00000384777 107 ntBASIC0.4□□□□□ -2.35
COL11A1P12107 SNORD28B-201ENST00000390993 75 ntBASIC0.4□□□□□ -2.35
COL11A1P12107 MIR942-201ENST00000401111 86 ntBASIC0.4□□□□□ -2.35
COL11A1P12107 SNORA79-201ENST00000408376 140 ntBASIC0.4□□□□□ -2.35
COL11A1P12107 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.4□□□□□ -2.35
COL11A1P12107 RNU6-847P-201ENST00000411115 108 ntBASIC0.4□□□□□ -2.35
COL11A1P12107 AC244023.1-201ENST00000426884 112 ntBASIC0.4□□□□□ -2.35
COL11A1P12107 AL157398.1-201ENST00000452981 186 ntBASIC0.4□□□□□ -2.35
COL11A1P12107 RNU7-73P-201ENST00000458743 63 ntBASIC0.4□□□□□ -2.35
COL11A1P12107 RNU2-13P-201ENST00000515909 113 ntBASIC0.4□□□□□ -2.35
COL11A1P12107 RNU6-191P-201ENST00000516295 94 ntBASIC0.4□□□□□ -2.35
COL11A1P12107 SNORA18.4-201ENST00000516440 124 ntBASIC0.4□□□□□ -2.35
COL11A1P12107 RNU6-197P-201ENST00000516680 100 ntBASIC0.4□□□□□ -2.35
COL11A1P12107 RNU6-958P-201ENST00000516995 106 ntBASIC0.4□□□□□ -2.35
COL11A1P12107 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC0.4□□□□□ -2.35
COL11A1P12107 AC242498.1-201ENST00000604134 111 ntBASIC0.4□□□□□ -2.35
COL11A1P12107 AC243994.1-201ENST00000618627 109 ntBASIC0.4□□□□□ -2.35
COL11A1P12107 SNORD14E-201ENST00000364009 85 ntBASIC0.39□□□□□ -2.35
COL11A1P12107 Y_RNA.237-201ENST00000364439 102 ntBASIC0.39□□□□□ -2.35
COL11A1P12107 RNU6-662P-201ENST00000384253 104 ntBASIC0.39□□□□□ -2.35
COL11A1P12107 SNORD38B-201ENST00000384690 67 ntBASIC0.39□□□□□ -2.35
COL11A1P12107 MIR626-201ENST00000385032 94 ntBASIC0.39□□□□□ -2.35
COL11A1P12107 MIR15B-201ENST00000385045 98 ntBASIC0.39□□□□□ -2.35
COL11A1P12107 SNORA26-201ENST00000391286 122 ntBASIC0.39□□□□□ -2.35
COL11A1P12107 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.39□□□□□ -2.35
COL11A1P12107 RNU2-64P-201ENST00000411315 191 ntBASIC0.39□□□□□ -2.35
COL11A1P12107 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.39□□□□□ -2.35
COL11A1P12107 SNORD127-201ENST00000458892 86 ntBASIC0.39□□□□□ -2.35
COL11A1P12107 U7.7-201ENST00000459276 60 ntBASIC0.39□□□□□ -2.35
COL11A1P12107 RNU7-21P-201ENST00000459430 62 ntBASIC0.39□□□□□ -2.35
COL11A1P12107 SNORD77.4-201ENST00000516158 81 ntBASIC0.39□□□□□ -2.35
COL11A1P12107 SCARNA15.1-201ENST00000516384 125 ntBASIC0.39□□□□□ -2.35
COL11A1P12107 MIR4282-201ENST00000583613 67 ntBASIC0.39□□□□□ -2.35
COL11A1P12107 AP000942.4-201ENST00000604811 241 ntBASIC0.39□□□□□ -2.35
COL11A1P12107 SNORD38B-202ENST00000625943 69 ntBASIC0.39□□□□□ -2.35
COL11A1P12107 Y_RNA.214-201ENST00000364201 112 ntBASIC0.38□□□□□ -2.35
COL11A1P12107 U8.5-201ENST00000364528 136 ntBASIC0.38□□□□□ -2.35
COL11A1P12107 Y_RNA.396-201ENST00000383949 103 ntBASIC0.38□□□□□ -2.35
COL11A1P12107 Y_RNA.410-201ENST00000383992 113 ntBASIC0.38□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 181.3 ms