Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 MIR1302-7-201ENST00000408841 72 ntBASIC1.23□□□□□ -2.21
PCNAP12004 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.23□□□□□ -2.21
PCNAP12004 AC004223.1-201ENST00000479840 271 ntBASIC1.23□□□□□ -2.21
PCNAP12004 RNU6-958P-201ENST00000516995 106 ntBASIC1.23□□□□□ -2.21
PCNAP12004 MIR4421-201ENST00000578133 69 ntBASIC1.23□□□□□ -2.21
PCNAP12004 MIR548AO-201ENST00000579992 96 ntBASIC1.23□□□□□ -2.21
PCNAP12004 AL022345.2-201ENST00000606307 135 ntBASIC1.23□□□□□ -2.21
PCNAP12004 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.23□□□□□ -2.21
PCNAP12004 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.23□□□□□ -2.21
PCNAP12004 MIR103A2-201ENST00000362154 78 ntBASIC1.22□□□□□ -2.21
PCNAP12004 MIR342-201ENST00000362212 99 ntBASIC1.22□□□□□ -2.21
PCNAP12004 RNA5SP48-201ENST00000363969 126 ntBASIC1.22□□□□□ -2.21
PCNAP12004 RNU6-1189P-201ENST00000383958 107 ntBASIC1.22□□□□□ -2.21
PCNAP12004 Y_RNA.537-201ENST00000384626 109 ntBASIC1.22□□□□□ -2.21
PCNAP12004 SNORA40.5-201ENST00000391061 128 ntBASIC1.22□□□□□ -2.21
PCNAP12004 SNORA75.2-201ENST00000391138 150 ntBASIC1.22□□□□□ -2.21
PCNAP12004 SNORA75.3-201ENST00000391231 150 ntBASIC1.22□□□□□ -2.21
PCNAP12004 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.22□□□□□ -2.21
PCNAP12004 RNU7-67P-201ENST00000459003 62 ntBASIC1.22□□□□□ -2.21
PCNAP12004 RNU7-95P-201ENST00000459222 64 ntBASIC1.22□□□□□ -2.21
PCNAP12004 RNU6-794P-201ENST00000517261 64 ntBASIC1.22□□□□□ -2.21
PCNAP12004 AL365205.2-201ENST00000594586 68 ntBASIC1.22□□□□□ -2.21
PCNAP12004 AP000942.3-201ENST00000603702 160 ntBASIC1.22□□□□□ -2.21
PCNAP12004 PRELID3BP2-201ENST00000605362 201 ntBASIC1.22□□□□□ -2.21
PCNAP12004 SNORA7.1-201ENST00000363750 139 ntBASIC1.21□□□□□ -2.22
PCNAP12004 Y_RNA.240-201ENST00000364469 95 ntBASIC1.21□□□□□ -2.22
PCNAP12004 RNU6-312P-201ENST00000364629 107 ntBASIC1.21□□□□□ -2.22
PCNAP12004 Y_RNA.440-201ENST00000384120 114 ntBASIC1.21□□□□□ -2.22
PCNAP12004 Y_RNA.521-201ENST00000384560 114 ntBASIC1.21□□□□□ -2.22
PCNAP12004 RNU6-768P-201ENST00000384683 107 ntBASIC1.21□□□□□ -2.22
PCNAP12004 MIR222-201ENST00000384992 110 ntBASIC1.21□□□□□ -2.22
PCNAP12004 SNORA40.6-201ENST00000391153 128 ntBASIC1.21□□□□□ -2.22
PCNAP12004 AC108059.2-201ENST00000434626 151 ntBASIC1.21□□□□□ -2.22
PCNAP12004 RPS29P29-201ENST00000456396 171 ntBASIC1.21□□□□□ -2.22
PCNAP12004 AC107297.1-201ENST00000459991 176 ntBASIC1.21□□□□□ -2.22
PCNAP12004 SNORA31.4-201ENST00000516049 129 ntBASIC1.21□□□□□ -2.22
PCNAP12004 Y_RNA.700-201ENST00000516806 100 ntBASIC1.21□□□□□ -2.22
PCNAP12004 SNORA70.22-201ENST00000517160 124 ntBASIC1.21□□□□□ -2.22
PCNAP12004 AP003716.2-201ENST00000528260 108 ntBASIC1.21□□□□□ -2.22
PCNAP12004 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
PCNAP12004 Y_RNA.150-201ENST00000363562 102 ntBASIC1.2□□□□□ -2.22
PCNAP12004 Y_RNA.410-201ENST00000383992 113 ntBASIC1.2□□□□□ -2.22
PCNAP12004 SNORA25-201ENST00000384384 134 ntBASIC1.2□□□□□ -2.22
PCNAP12004 Y_RNA.542-201ENST00000384641 111 ntBASIC1.2□□□□□ -2.22
PCNAP12004 RNU6-1067P-201ENST00000384752 107 ntBASIC1.2□□□□□ -2.22
PCNAP12004 RNU6-913P-201ENST00000390913 95 ntBASIC1.2□□□□□ -2.22
PCNAP12004 RPS29P24-201ENST00000486345 171 ntBASIC1.2□□□□□ -2.22
PCNAP12004 AC107027.2-201ENST00000512197 115 ntBASIC1.2□□□□□ -2.22
PCNAP12004 Y_RNA.662-201ENST00000516028 97 ntBASIC1.2□□□□□ -2.22
PCNAP12004 MIR3658-201ENST00000636291 56 ntBASIC1.2□□□□□ -2.22
PCNAP12004 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
PCNAP12004 RNU6-1082P-201ENST00000364574 107 ntBASIC1.19□□□□□ -2.22
PCNAP12004 Y_RNA.330-201ENST00000365230 109 ntBASIC1.19□□□□□ -2.22
PCNAP12004 SNORA24-201ENST00000384096 131 ntBASIC1.19□□□□□ -2.22
PCNAP12004 AC090844.1-201ENST00000422019 156 ntBASIC1.19□□□□□ -2.22
PCNAP12004 SNORD79.1-201ENST00000516069 84 ntBASIC1.19□□□□□ -2.22
PCNAP12004 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.19□□□□□ -2.22
PCNAP12004 MIR5197-201ENST00000583721 112 ntBASIC1.19□□□□□ -2.22
PCNAP12004 AL157834.3-201ENST00000615543 103 ntBASIC1.19□□□□□ -2.22
PCNAP12004 RNU4-84P-201ENST00000364200 139 ntBASIC1.18□□□□□ -2.22
PCNAP12004 RNU6-654P-201ENST00000364373 107 ntBASIC1.18□□□□□ -2.22
PCNAP12004 RNA5SP95-201ENST00000410319 137 ntBASIC1.18□□□□□ -2.22
PCNAP12004 RNU6-1190P-201ENST00000410811 104 ntBASIC1.18□□□□□ -2.22
PCNAP12004 BTF3P4-201ENST00000418852 495 ntBASIC1.18□□□□□ -2.22
PCNAP12004 AL392103.1-201ENST00000447000 198 ntBASIC1.18□□□□□ -2.22
PCNAP12004 RNU6-182P-201ENST00000516970 105 ntBASIC1.18□□□□□ -2.22
PCNAP12004 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.18□□□□□ -2.22
PCNAP12004 MIR3660-201ENST00000584845 100 ntBASIC1.18□□□□□ -2.22
PCNAP12004 HSPE1P19-201ENST00000603327 295 ntBASIC1.18□□□□□ -2.22
PCNAP12004 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.18□□□□□ -2.22
PCNAP12004 AC027335.2-201ENST00000624030 375 ntBASIC1.18□□□□□ -2.22
PCNAP12004 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
PCNAP12004 MIR378A-201ENST00000362177 66 ntBASIC1.17□□□□□ -2.22
PCNAP12004 SNORA25.7-201ENST00000364375 127 ntBASIC1.17□□□□□ -2.22
PCNAP12004 Y_RNA.351-201ENST00000365436 96 ntBASIC1.17□□□□□ -2.22
PCNAP12004 Y_RNA.357-201ENST00000365487 109 ntBASIC1.17□□□□□ -2.22
PCNAP12004 RNU6-1292P-201ENST00000383856 107 ntBASIC1.17□□□□□ -2.22
PCNAP12004 Y_RNA.393-201ENST00000383936 102 ntBASIC1.17□□□□□ -2.22
PCNAP12004 RNU6-482P-201ENST00000391068 107 ntBASIC1.17□□□□□ -2.22
PCNAP12004 RNA5SP127-201ENST00000411051 133 ntBASIC1.17□□□□□ -2.22
PCNAP12004 HMGN1P33-201ENST00000432945 451 ntBASIC1.17□□□□□ -2.22
PCNAP12004 RNU2-11P-201ENST00000459191 187 ntBASIC1.17□□□□□ -2.22
PCNAP12004 RNU7-45P-201ENST00000459460 63 ntBASIC1.17□□□□□ -2.22
PCNAP12004 RNU6-998P-201ENST00000515894 101 ntBASIC1.17□□□□□ -2.22
PCNAP12004 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.17□□□□□ -2.22
PCNAP12004 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.17□□□□□ -2.22
PCNAP12004 AC104465.1-201ENST00000611365 139 ntBASIC1.17□□□□□ -2.22
PCNAP12004 AL353770.2-201ENST00000620024 78 ntBASIC1.17□□□□□ -2.22
PCNAP12004 AC008163.1-202ENST00000636004 2889 ntBASIC1.16□□□□□ -2.22
PCNAP12004 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.16□□□□□ -2.22
PCNAP12004 RNY1P11-201ENST00000363759 113 ntBASIC1.16□□□□□ -2.22
PCNAP12004 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
PCNAP12004 RNU6-239P-201ENST00000390990 99 ntBASIC1.16□□□□□ -2.22
PCNAP12004 AL035398.1-201ENST00000430869 322 ntBASIC1.16□□□□□ -2.22
PCNAP12004 RNU7-21P-201ENST00000459430 62 ntBASIC1.16□□□□□ -2.22
PCNAP12004 MIR6516-201ENST00000630554 81 ntBASIC1.16□□□□□ -2.22
PCNAP12004 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.15□□□□□ -2.23
PCNAP12004 Y_RNA.337-201ENST00000365312 102 ntBASIC1.15□□□□□ -2.23
PCNAP12004 RNU6-597P-201ENST00000365620 102 ntBASIC1.15□□□□□ -2.23
PCNAP12004 SNORA80D-201ENST00000384488 135 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms