Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 Y_RNA.24-201ENST00000362508 103 ntBASIC0.3□□□□□ -2.36
CD74P04233 Y_RNA.26-201ENST00000362539 101 ntBASIC0.3□□□□□ -2.36
CD74P04233 RNU6-1309P-201ENST00000363305 108 ntBASIC0.3□□□□□ -2.36
CD74P04233 RNA5SP325-201ENST00000363756 130 ntBASIC0.3□□□□□ -2.36
CD74P04233 Y_RNA.210-201ENST00000364161 110 ntBASIC0.3□□□□□ -2.36
CD74P04233 SNORA24-201ENST00000384096 131 ntBASIC0.3□□□□□ -2.36
CD74P04233 SNORD38B-201ENST00000384690 67 ntBASIC0.3□□□□□ -2.36
CD74P04233 Y_RNA.572-201ENST00000384757 98 ntBASIC0.3□□□□□ -2.36
CD74P04233 RNU6-679P-201ENST00000391003 106 ntBASIC0.3□□□□□ -2.36
CD74P04233 RNU6-177P-201ENST00000411257 104 ntBASIC0.3□□□□□ -2.36
CD74P04233 RNU6-938P-201ENST00000411285 103 ntBASIC0.3□□□□□ -2.36
CD74P04233 MTCO2P12-201ENST00000427426 682 ntBASIC0.3□□□□□ -2.36
CD74P04233 AC087499.4-201ENST00000448505 178 ntBASIC0.3□□□□□ -2.36
CD74P04233 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.3□□□□□ -2.36
CD74P04233 SNORD77.4-201ENST00000516158 81 ntBASIC0.3□□□□□ -2.36
CD74P04233 SNORD36C-201ENST00000516733 66 ntBASIC0.3□□□□□ -2.36
CD74P04233 Y_RNA.721-201ENST00000517207 102 ntBASIC0.3□□□□□ -2.36
CD74P04233 AC131281.1-201ENST00000522984 164 ntBASIC0.3□□□□□ -2.36
CD74P04233 AC100767.1-201ENST00000528178 123 ntBASIC0.3□□□□□ -2.36
CD74P04233 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.3□□□□□ -2.36
CD74P04233 AC006006.1-201ENST00000603082 144 ntBASIC0.3□□□□□ -2.36
CD74P04233 AP000942.4-201ENST00000604811 241 ntBASIC0.3□□□□□ -2.36
CD74P04233 AL008718.3-201ENST00000610217 321 ntBASIC0.3□□□□□ -2.36
CD74P04233 MIR6740-201ENST00000618268 113 ntBASIC0.3□□□□□ -2.36
CD74P04233 SNORD38B-202ENST00000625943 69 ntBASIC0.3□□□□□ -2.36
CD74P04233 MIR924-201ENST00000638017 53 ntBASIC0.3□□□□□ -2.36
CD74P04233 MTND4P29-201ENST00000503122 1372 ntBASIC0.3□□□□□ -2.36
CD74P04233 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
CD74P04233 Y_RNA.7-201ENST00000362352 102 ntBASIC0.29□□□□□ -2.36
CD74P04233 Y_RNA.16-201ENST00000362421 102 ntBASIC0.29□□□□□ -2.36
CD74P04233 Y_RNA.37-201ENST00000362606 108 ntBASIC0.29□□□□□ -2.36
CD74P04233 RNU6-770P-201ENST00000363929 105 ntBASIC0.29□□□□□ -2.36
CD74P04233 Y_RNA.214-201ENST00000364201 112 ntBASIC0.29□□□□□ -2.36
CD74P04233 SNORD61-201ENST00000384252 73 ntBASIC0.29□□□□□ -2.36
CD74P04233 SNORA27-201ENST00000384323 126 ntBASIC0.29□□□□□ -2.36
CD74P04233 Y_RNA.527-201ENST00000384573 102 ntBASIC0.29□□□□□ -2.36
CD74P04233 MIR518F-201ENST00000384973 87 ntBASIC0.29□□□□□ -2.36
CD74P04233 SNORA40.5-201ENST00000391061 128 ntBASIC0.29□□□□□ -2.36
CD74P04233 RNU7-56P-201ENST00000458744 62 ntBASIC0.29□□□□□ -2.36
CD74P04233 Y_RNA.631-201ENST00000459607 101 ntBASIC0.29□□□□□ -2.36
CD74P04233 MTCO2P24-201ENST00000515611 426 ntBASIC0.29□□□□□ -2.36
CD74P04233 SNORA68.3-201ENST00000515906 83 ntBASIC0.29□□□□□ -2.36
CD74P04233 SCARNA24.2-201ENST00000516968 130 ntBASIC0.29□□□□□ -2.36
CD74P04233 Y_RNA.802-201ENST00000614892 130 ntBASIC0.29□□□□□ -2.36
CD74P04233 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.28□□□□□ -2.36
CD74P04233 MIR342-201ENST00000362212 99 ntBASIC0.28□□□□□ -2.36
CD74P04233 Y_RNA.64-201ENST00000362845 102 ntBASIC0.28□□□□□ -2.36
CD74P04233 RNU6-326P-201ENST00000365480 107 ntBASIC0.28□□□□□ -2.36
CD74P04233 Y_RNA.380-201ENST00000365663 111 ntBASIC0.28□□□□□ -2.36
CD74P04233 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.28□□□□□ -2.36
CD74P04233 SNORA22B-201ENST00000383876 138 ntBASIC0.28□□□□□ -2.36
CD74P04233 Y_RNA.509-201ENST00000384506 99 ntBASIC0.28□□□□□ -2.36
CD74P04233 MIR588-201ENST00000384900 83 ntBASIC0.28□□□□□ -2.36
CD74P04233 MTATP6P23-201ENST00000440153 476 ntBASIC0.28□□□□□ -2.36
CD74P04233 RPS29P24-201ENST00000486345 171 ntBASIC0.28□□□□□ -2.36
CD74P04233 SNORA27.4-201ENST00000516650 95 ntBASIC0.28□□□□□ -2.36
CD74P04233 RNU7-53P-201ENST00000516705 60 ntBASIC0.28□□□□□ -2.36
CD74P04233 RNU6-365P-201ENST00000517113 106 ntBASIC0.28□□□□□ -2.36
CD74P04233 MIR4662B-201ENST00000579498 81 ntBASIC0.28□□□□□ -2.36
CD74P04233 AL160413.1-201ENST00000622780 310 ntBASIC0.28□□□□□ -2.36
CD74P04233 RNA5SP457-201ENST00000363657 124 ntBASIC0.27□□□□□ -2.37
CD74P04233 Y_RNA.216-201ENST00000364205 93 ntBASIC0.27□□□□□ -2.37
CD74P04233 Y_RNA.217-201ENST00000364214 105 ntBASIC0.27□□□□□ -2.37
CD74P04233 SNORA1.1-201ENST00000364671 133 ntBASIC0.27□□□□□ -2.37
CD74P04233 RNU6-364P-201ENST00000384387 107 ntBASIC0.27□□□□□ -2.37
CD74P04233 MIR548A2-201ENST00000384956 97 ntBASIC0.27□□□□□ -2.37
CD74P04233 MIR938-201ENST00000401216 83 ntBASIC0.27□□□□□ -2.37
CD74P04233 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.27□□□□□ -2.37
CD74P04233 MTND4LP30-201ENST00000454092 297 ntBASIC0.27□□□□□ -2.37
CD74P04233 MTND5P22-201ENST00000458380 195 ntBASIC0.27□□□□□ -2.37
CD74P04233 RNU7-73P-201ENST00000458743 63 ntBASIC0.27□□□□□ -2.37
CD74P04233 Y_RNA.641-201ENST00000459414 105 ntBASIC0.27□□□□□ -2.37
CD74P04233 AC002350.1-201ENST00000490759 375 ntBASIC0.27□□□□□ -2.37
CD74P04233 AL117351.2-201ENST00000513571 157 ntBASIC0.27□□□□□ -2.37
CD74P04233 RNA5SP134-201ENST00000516492 96 ntBASIC0.27□□□□□ -2.37
CD74P04233 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.27□□□□□ -2.37
CD74P04233 MIR8055-201ENST00000610739 97 ntBASIC0.27□□□□□ -2.37
CD74P04233 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.26□□□□□ -2.37
CD74P04233 SNORA63C-201ENST00000364578 129 ntBASIC0.26□□□□□ -2.37
CD74P04233 Y_RNA.455-201ENST00000384230 98 ntBASIC0.26□□□□□ -2.37
CD74P04233 SNORD12C-201ENST00000386307 89 ntBASIC0.26□□□□□ -2.37
CD74P04233 MIR526A2-201ENST00000390198 65 ntBASIC0.26□□□□□ -2.37
CD74P04233 RNU6-1165P-201ENST00000410119 107 ntBASIC0.26□□□□□ -2.37
CD74P04233 RNU6-1190P-201ENST00000410811 104 ntBASIC0.26□□□□□ -2.37
CD74P04233 MTND4LP11-201ENST00000422184 280 ntBASIC0.26□□□□□ -2.37
CD74P04233 AF228730.3-201ENST00000436691 102 ntBASIC0.26□□□□□ -2.37
CD74P04233 RNU2-11P-201ENST00000459191 187 ntBASIC0.26□□□□□ -2.37
CD74P04233 RNA5SP330-201ENST00000517096 96 ntBASIC0.26□□□□□ -2.37
CD74P04233 AP003733.2-201ENST00000529409 171 ntBASIC0.26□□□□□ -2.37
CD74P04233 AC008608.1-201ENST00000603910 127 ntBASIC0.26□□□□□ -2.37
CD74P04233 MIR8087-201ENST00000612745 78 ntBASIC0.26□□□□□ -2.37
CD74P04233 AC092634.7-201ENST00000621022 103 ntBASIC0.26□□□□□ -2.37
CD74P04233 Z97988.1-201ENST00000637697 135 ntBASIC0.26□□□□□ -2.37
CD74P04233 Y_RNA.117-201ENST00000363294 101 ntBASIC0.25□□□□□ -2.37
CD74P04233 Y_RNA.138-201ENST00000363462 102 ntBASIC0.25□□□□□ -2.37
CD74P04233 Y_RNA.229-201ENST00000364347 113 ntBASIC0.25□□□□□ -2.37
CD74P04233 Y_RNA.258-201ENST00000364613 105 ntBASIC0.25□□□□□ -2.37
CD74P04233 SNORD24-201ENST00000383884 75 ntBASIC0.25□□□□□ -2.37
CD74P04233 RNU6-211P-201ENST00000384047 107 ntBASIC0.25□□□□□ -2.37
CD74P04233 Y_RNA.460-201ENST00000384255 102 ntBASIC0.25□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms