Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 RNU6-1054P-201ENST00000411293 104 ntBASIC1.04□□□□□ -2.24
VTNP04004 RNA5SP153-201ENST00000516498 76 ntBASIC1.04□□□□□ -2.24
VTNP04004 RNA5SP404-201ENST00000517118 132 ntBASIC1.04□□□□□ -2.24
VTNP04004 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
VTNP04004 AC009779.6-201ENST00000603972 165 ntBASIC1.04□□□□□ -2.24
VTNP04004 MIR4791-201ENST00000607666 84 ntBASIC1.04□□□□□ -2.24
VTNP04004 AC108706.1-201ENST00000611053 297 ntBASIC1.04□□□□□ -2.24
VTNP04004 MIR6788-201ENST00000618842 66 ntBASIC1.04□□□□□ -2.24
VTNP04004 MIR103A2-201ENST00000362154 78 ntBASIC1.03□□□□□ -2.24
VTNP04004 Y_RNA.37-201ENST00000362606 108 ntBASIC1.03□□□□□ -2.24
VTNP04004 Y_RNA.297-201ENST00000364950 91 ntBASIC1.03□□□□□ -2.24
VTNP04004 Y_RNA.330-201ENST00000365230 109 ntBASIC1.03□□□□□ -2.24
VTNP04004 SNORD24-201ENST00000383884 75 ntBASIC1.03□□□□□ -2.24
VTNP04004 Y_RNA.494-201ENST00000384432 111 ntBASIC1.03□□□□□ -2.24
VTNP04004 MIR532-201ENST00000385025 91 ntBASIC1.03□□□□□ -2.24
VTNP04004 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
VTNP04004 RNU6ATAC23P-201ENST00000408448 123 ntBASIC1.03□□□□□ -2.24
VTNP04004 AF228730.3-201ENST00000436691 102 ntBASIC1.03□□□□□ -2.24
VTNP04004 RPS29P28-201ENST00000446439 141 ntBASIC1.03□□□□□ -2.24
VTNP04004 snoU13.25-201ENST00000458945 104 ntBASIC1.03□□□□□ -2.24
VTNP04004 RNU7-67P-201ENST00000459003 62 ntBASIC1.03□□□□□ -2.24
VTNP04004 RNU6-197P-201ENST00000516680 100 ntBASIC1.03□□□□□ -2.24
VTNP04004 MIR4698-201ENST00000577795 80 ntBASIC1.03□□□□□ -2.24
VTNP04004 AC211469.2-201ENST00000605461 205 ntBASIC1.03□□□□□ -2.24
VTNP04004 AC243994.1-201ENST00000618627 109 ntBASIC1.03□□□□□ -2.24
VTNP04004 AC141273.2-201ENST00000618989 130 ntBASIC1.03□□□□□ -2.24
VTNP04004 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.03□□□□□ -2.25
VTNP04004 Y_RNA.23-201ENST00000362496 106 ntBASIC1.02□□□□□ -2.25
VTNP04004 RNU6-888P-201ENST00000363010 101 ntBASIC1.02□□□□□ -2.25
VTNP04004 Y_RNA.274-201ENST00000364714 101 ntBASIC1.02□□□□□ -2.25
VTNP04004 SNORA70.7-201ENST00000384159 133 ntBASIC1.02□□□□□ -2.25
VTNP04004 MIR548A2-201ENST00000384956 97 ntBASIC1.02□□□□□ -2.25
VTNP04004 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.02□□□□□ -2.25
VTNP04004 RNU6-847P-201ENST00000411115 108 ntBASIC1.02□□□□□ -2.25
VTNP04004 SNORD36C-201ENST00000516733 66 ntBASIC1.02□□□□□ -2.25
VTNP04004 RNU6-958P-201ENST00000516995 106 ntBASIC1.02□□□□□ -2.25
VTNP04004 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.02□□□□□ -2.25
VTNP04004 AC022559.1-201ENST00000520905 205 ntBASIC1.02□□□□□ -2.25
VTNP04004 AP003484.1-201ENST00000530974 250 ntBASIC1.02□□□□□ -2.25
VTNP04004 MIR3129-201ENST00000581095 76 ntBASIC1.02□□□□□ -2.25
VTNP04004 MIR151B-201ENST00000584249 96 ntBASIC1.02□□□□□ -2.25
VTNP04004 AC134878.1-201ENST00000619901 243 ntBASIC1.02□□□□□ -2.25
VTNP04004 U6.106-201ENST00000636360 105 ntBASIC1.02□□□□□ -2.25
VTNP04004 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
VTNP04004 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.01□□□□□ -2.25
VTNP04004 MIR342-201ENST00000362212 99 ntBASIC1.01□□□□□ -2.25
VTNP04004 Y_RNA.66-201ENST00000362862 102 ntBASIC1.01□□□□□ -2.25
VTNP04004 RNA5SP264-201ENST00000363115 107 ntBASIC1.01□□□□□ -2.25
VTNP04004 Y_RNA.121-201ENST00000363309 113 ntBASIC1.01□□□□□ -2.25
VTNP04004 Y_RNA.363-201ENST00000365529 113 ntBASIC1.01□□□□□ -2.25
VTNP04004 SNORA1-201ENST00000384107 130 ntBASIC1.01□□□□□ -2.25
VTNP04004 MT-TG-201ENST00000387429 68 ntBASIC1.01□□□□□ -2.25
VTNP04004 RNU6-918P-201ENST00000391219 106 ntBASIC1.01□□□□□ -2.25
VTNP04004 AC006461.1-201ENST00000412637 326 ntBASIC1.01□□□□□ -2.25
VTNP04004 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.01□□□□□ -2.25
VTNP04004 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.01□□□□□ -2.25
VTNP04004 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.01□□□□□ -2.25
VTNP04004 RPS26P48-201ENST00000491713 339 ntBASIC1.01□□□□□ -2.25
VTNP04004 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.01□□□□□ -2.25
VTNP04004 RNA5SP48-201ENST00000363969 126 ntBASIC1□□□□□ -2.25
VTNP04004 Y_RNA.412-201ENST00000384001 104 ntBASIC1□□□□□ -2.25
VTNP04004 Y_RNA.537-201ENST00000384626 109 ntBASIC1□□□□□ -2.25
VTNP04004 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1□□□□□ -2.25
VTNP04004 Y_RNA.793-201ENST00000411222 111 ntBASIC1□□□□□ -2.25
VTNP04004 RNU6-938P-201ENST00000411285 103 ntBASIC1□□□□□ -2.25
VTNP04004 MTND5P15-201ENST00000434246 349 ntBASIC1□□□□□ -2.25
VTNP04004 AC087499.4-201ENST00000448505 178 ntBASIC1□□□□□ -2.25
VTNP04004 AL138752.1-201ENST00000452964 351 ntBASIC1□□□□□ -2.25
VTNP04004 Y_RNA.644-201ENST00000459006 113 ntBASIC1□□□□□ -2.25
VTNP04004 OR2A41P-201ENST00000473586 105 ntBASIC1□□□□□ -2.25
VTNP04004 Y_RNA.674-201ENST00000516362 113 ntBASIC1□□□□□ -2.25
VTNP04004 Z83818.1-201ENST00000603584 150 ntBASIC1□□□□□ -2.25
VTNP04004 PRELID3BP2-201ENST00000605362 201 ntBASIC1□□□□□ -2.25
VTNP04004 MTND1P7-201ENST00000632801 297 ntBASIC1□□□□□ -2.25
VTNP04004 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.99□□□□□ -2.25
VTNP04004 RNU1-124P-201ENST00000363861 145 ntBASIC0.99□□□□□ -2.25
VTNP04004 RNU6-1189P-201ENST00000383958 107 ntBASIC0.99□□□□□ -2.25
VTNP04004 SNORA27-201ENST00000384323 126 ntBASIC0.99□□□□□ -2.25
VTNP04004 SNORA80D-201ENST00000384488 135 ntBASIC0.99□□□□□ -2.25
VTNP04004 SNORA40.5-201ENST00000391061 128 ntBASIC0.99□□□□□ -2.25
VTNP04004 SNORA18.4-201ENST00000516440 124 ntBASIC0.99□□□□□ -2.25
VTNP04004 SNORD116-25-201ENST00000516517 92 ntBASIC0.99□□□□□ -2.25
VTNP04004 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.99□□□□□ -2.25
VTNP04004 MIR378D2-201ENST00000580636 98 ntBASIC0.99□□□□□ -2.25
VTNP04004 MIR6857-201ENST00000613267 93 ntBASIC0.99□□□□□ -2.25
VTNP04004 AC022709.1-201ENST00000615967 87 ntBASIC0.99□□□□□ -2.25
VTNP04004 AC008163.1-202ENST00000636004 2889 ntBASIC0.99□□□□□ -2.25
VTNP04004 AL442644.1-201ENST00000454390 3105 ntBASIC0.99□□□□□ -2.25
VTNP04004 SNORD115-34-201ENST00000362441 82 ntBASIC0.98□□□□□ -2.25
VTNP04004 SNORD115-12-201ENST00000362583 82 ntBASIC0.98□□□□□ -2.25
VTNP04004 SNORD115-29-201ENST00000362834 82 ntBASIC0.98□□□□□ -2.25
VTNP04004 SNORD115-9-201ENST00000362912 82 ntBASIC0.98□□□□□ -2.25
VTNP04004 SNORD115-21-201ENST00000362963 81 ntBASIC0.98□□□□□ -2.25
VTNP04004 SNORD115-14-201ENST00000363090 81 ntBASIC0.98□□□□□ -2.25
VTNP04004 SNORD115-13-201ENST00000363358 82 ntBASIC0.98□□□□□ -2.25
VTNP04004 SNORD115-41-201ENST00000363608 82 ntBASIC0.98□□□□□ -2.25
VTNP04004 SNORD115-11-201ENST00000363616 82 ntBASIC0.98□□□□□ -2.25
VTNP04004 SNORD115-5-201ENST00000363633 82 ntBASIC0.98□□□□□ -2.25
VTNP04004 SNORD115-39-201ENST00000363694 82 ntBASIC0.98□□□□□ -2.25
VTNP04004 SNORD115-4-201ENST00000363810 82 ntBASIC0.98□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms