Protein–RNA interactions for Protein: P03956

MMP1, Interstitial collagenase, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP1P03956 MIR6516-201ENST00000630554 81 ntBASIC0.67□□□□□ -2.3
MMP1P03956 MTND1P7-201ENST00000632801 297 ntBASIC0.67□□□□□ -2.3
MMP1P03956 snoU2_19.4-201ENST00000364329 80 ntBASIC0.66□□□□□ -2.3
MMP1P03956 Y_RNA.370-201ENST00000365589 108 ntBASIC0.66□□□□□ -2.3
MMP1P03956 Y_RNA.537-201ENST00000384626 109 ntBASIC0.66□□□□□ -2.3
MMP1P03956 RNU6-1011P-201ENST00000384668 107 ntBASIC0.66□□□□□ -2.3
MMP1P03956 SNORA8.3-201ENST00000384679 139 ntBASIC0.66□□□□□ -2.3
MMP1P03956 MIR518F-201ENST00000384973 87 ntBASIC0.66□□□□□ -2.3
MMP1P03956 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.66□□□□□ -2.3
MMP1P03956 AC036111.3-201ENST00000526389 112 ntBASIC0.66□□□□□ -2.3
MMP1P03956 AC109810.1-201ENST00000534066 224 ntBASIC0.66□□□□□ -2.3
MMP1P03956 AL442663.2-201ENST00000554385 511 ntBASIC0.66□□□□□ -2.3
MMP1P03956 AC004817.2-201ENST00000561794 651 ntBASIC0.66□□□□□ -2.3
MMP1P03956 AC023827.1-201ENST00000569247 97 ntBASIC0.66□□□□□ -2.3
MMP1P03956 MIR548AO-201ENST00000579992 96 ntBASIC0.66□□□□□ -2.3
MMP1P03956 AC006006.1-201ENST00000603082 144 ntBASIC0.66□□□□□ -2.3
MMP1P03956 AC011921.3-201ENST00000605540 361 ntBASIC0.66□□□□□ -2.3
MMP1P03956 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.66□□□□□ -2.3
MMP1P03956 AL109933.3-201ENST00000619095 188 ntBASIC0.66□□□□□ -2.3
MMP1P03956 Y_RNA.242-201ENST00000364473 110 ntBASIC0.65□□□□□ -2.31
MMP1P03956 Y_RNA.251-201ENST00000364551 99 ntBASIC0.65□□□□□ -2.31
MMP1P03956 RNU6-484P-201ENST00000384016 107 ntBASIC0.65□□□□□ -2.31
MMP1P03956 SNORA24-201ENST00000384096 131 ntBASIC0.65□□□□□ -2.31
MMP1P03956 SNORD61-201ENST00000384252 73 ntBASIC0.65□□□□□ -2.31
MMP1P03956 MIR92A1-201ENST00000385233 78 ntBASIC0.65□□□□□ -2.31
MMP1P03956 MT-TT-201ENST00000387460 66 ntBASIC0.65□□□□□ -2.31
MMP1P03956 MIR1302-6-201ENST00000408466 90 ntBASIC0.65□□□□□ -2.31
MMP1P03956 AC023449.1-201ENST00000454464 154 ntBASIC0.65□□□□□ -2.31
MMP1P03956 RNU6-453P-201ENST00000516819 85 ntBASIC0.65□□□□□ -2.31
MMP1P03956 RNU11-2P-201ENST00000516898 142 ntBASIC0.65□□□□□ -2.31
MMP1P03956 AC012433.1-201ENST00000588916 398 ntBASIC0.65□□□□□ -2.31
MMP1P03956 AL360085.1-201ENST00000604713 532 ntBASIC0.65□□□□□ -2.31
MMP1P03956 Y_RNA.47-201ENST00000362697 108 ntBASIC0.64□□□□□ -2.31
MMP1P03956 Y_RNA.66-201ENST00000362862 102 ntBASIC0.64□□□□□ -2.31
MMP1P03956 RNA5SP499-201ENST00000363982 119 ntBASIC0.64□□□□□ -2.31
MMP1P03956 SNORA51.10-201ENST00000384418 136 ntBASIC0.64□□□□□ -2.31
MMP1P03956 MIR568-201ENST00000385036 95 ntBASIC0.64□□□□□ -2.31
MMP1P03956 MIR605-201ENST00000385078 83 ntBASIC0.64□□□□□ -2.31
MMP1P03956 RNA5SP95-201ENST00000410319 137 ntBASIC0.64□□□□□ -2.31
MMP1P03956 AC090844.1-201ENST00000422019 156 ntBASIC0.64□□□□□ -2.31
MMP1P03956 MIR4662B-201ENST00000579498 81 ntBASIC0.64□□□□□ -2.31
MMP1P03956 AL353765.1-201ENST00000605514 183 ntBASIC0.64□□□□□ -2.31
MMP1P03956 AC243994.1-201ENST00000618627 109 ntBASIC0.64□□□□□ -2.31
MMP1P03956 Y_RNA.76-201ENST00000362931 109 ntBASIC0.63□□□□□ -2.31
MMP1P03956 Y_RNA.85-201ENST00000363014 111 ntBASIC0.63□□□□□ -2.31
MMP1P03956 Y_RNA.91-201ENST00000363042 107 ntBASIC0.63□□□□□ -2.31
MMP1P03956 RNU6-653P-201ENST00000363074 106 ntBASIC0.63□□□□□ -2.31
MMP1P03956 RNU6-1309P-201ENST00000363305 108 ntBASIC0.63□□□□□ -2.31
MMP1P03956 Y_RNA.133-201ENST00000363428 110 ntBASIC0.63□□□□□ -2.31
MMP1P03956 Y_RNA.176-201ENST00000363815 109 ntBASIC0.63□□□□□ -2.31
MMP1P03956 SNORD115-28-201ENST00000363931 81 ntBASIC0.63□□□□□ -2.31
MMP1P03956 Y_RNA.304-201ENST00000365011 112 ntBASIC0.63□□□□□ -2.31
MMP1P03956 SNORA1.2-201ENST00000365189 134 ntBASIC0.63□□□□□ -2.31
MMP1P03956 RNU6-1335P-201ENST00000365426 107 ntBASIC0.63□□□□□ -2.31
MMP1P03956 SNORD24-201ENST00000383884 75 ntBASIC0.63□□□□□ -2.31
MMP1P03956 Y_RNA.459-201ENST00000384251 102 ntBASIC0.63□□□□□ -2.31
MMP1P03956 RNU6-613P-201ENST00000410412 108 ntBASIC0.63□□□□□ -2.31
MMP1P03956 RNU6-847P-201ENST00000411115 108 ntBASIC0.63□□□□□ -2.31
MMP1P03956 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.63□□□□□ -2.31
MMP1P03956 AC098934.3-201ENST00000430450 190 ntBASIC0.63□□□□□ -2.31
MMP1P03956 SNRPGP8-201ENST00000454064 226 ntBASIC0.63□□□□□ -2.31
MMP1P03956 SCARNA15.1-201ENST00000516384 125 ntBASIC0.63□□□□□ -2.31
MMP1P03956 RNU6-94P-201ENST00000607728 107 ntBASIC0.63□□□□□ -2.31
MMP1P03956 AL365265.1-201ENST00000621045 234 ntBASIC0.63□□□□□ -2.31
MMP1P03956 SNORD115-34-201ENST00000362441 82 ntBASIC0.62□□□□□ -2.31
MMP1P03956 SNORD115-12-201ENST00000362583 82 ntBASIC0.62□□□□□ -2.31
MMP1P03956 Y_RNA.37-201ENST00000362606 108 ntBASIC0.62□□□□□ -2.31
MMP1P03956 SNORD115-29-201ENST00000362834 82 ntBASIC0.62□□□□□ -2.31
MMP1P03956 SNORD115-9-201ENST00000362912 82 ntBASIC0.62□□□□□ -2.31
MMP1P03956 SNORD115-21-201ENST00000362963 81 ntBASIC0.62□□□□□ -2.31
MMP1P03956 RNU6-888P-201ENST00000363010 101 ntBASIC0.62□□□□□ -2.31
MMP1P03956 SNORD115-14-201ENST00000363090 81 ntBASIC0.62□□□□□ -2.31
MMP1P03956 SNORD115-13-201ENST00000363358 82 ntBASIC0.62□□□□□ -2.31
MMP1P03956 SNORD115-41-201ENST00000363608 82 ntBASIC0.62□□□□□ -2.31
MMP1P03956 SNORD115-11-201ENST00000363616 82 ntBASIC0.62□□□□□ -2.31
MMP1P03956 SNORD115-5-201ENST00000363633 82 ntBASIC0.62□□□□□ -2.31
MMP1P03956 SNORD115-39-201ENST00000363694 82 ntBASIC0.62□□□□□ -2.31
MMP1P03956 SNORD115-4-201ENST00000363810 82 ntBASIC0.62□□□□□ -2.31
MMP1P03956 SNORD45.3-201ENST00000363836 72 ntBASIC0.62□□□□□ -2.31
MMP1P03956 SNORD115-16-201ENST00000363887 82 ntBASIC0.62□□□□□ -2.31
MMP1P03956 SNORD115-6-201ENST00000363942 82 ntBASIC0.62□□□□□ -2.31
MMP1P03956 SNORD115-42-201ENST00000364273 82 ntBASIC0.62□□□□□ -2.31
MMP1P03956 SNORD115-15-201ENST00000364809 81 ntBASIC0.62□□□□□ -2.31
MMP1P03956 SNORD115-1-201ENST00000364961 82 ntBASIC0.62□□□□□ -2.31
MMP1P03956 SNORD115-26-201ENST00000365067 82 ntBASIC0.62□□□□□ -2.31
MMP1P03956 SNORD115-10-201ENST00000365073 81 ntBASIC0.62□□□□□ -2.31
MMP1P03956 SNORD115-43-201ENST00000365503 82 ntBASIC0.62□□□□□ -2.31
MMP1P03956 RNU6-716P-201ENST00000365621 103 ntBASIC0.62□□□□□ -2.31
MMP1P03956 SNORD115-36-201ENST00000365629 82 ntBASIC0.62□□□□□ -2.31
MMP1P03956 RNU6-125P-201ENST00000384505 107 ntBASIC0.62□□□□□ -2.31
MMP1P03956 RNU6-381P-201ENST00000391259 108 ntBASIC0.62□□□□□ -2.31
MMP1P03956 Y_RNA.590-201ENST00000410140 107 ntBASIC0.62□□□□□ -2.31
MMP1P03956 RNU2-38P-201ENST00000410856 79 ntBASIC0.62□□□□□ -2.31
MMP1P03956 AL035398.1-201ENST00000430869 322 ntBASIC0.62□□□□□ -2.31
MMP1P03956 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.62□□□□□ -2.31
MMP1P03956 RNU6-693P-201ENST00000516134 107 ntBASIC0.62□□□□□ -2.31
MMP1P03956 SNORA18.4-201ENST00000516440 124 ntBASIC0.62□□□□□ -2.31
MMP1P03956 SNORD36C-201ENST00000516733 66 ntBASIC0.62□□□□□ -2.31
MMP1P03956 RNU6-1270P-201ENST00000517128 108 ntBASIC0.62□□□□□ -2.31
MMP1P03956 SNORD115-40-201ENST00000606510 82 ntBASIC0.62□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 178 ms