Protein–RNA interactions for Protein: O95639

CPSF4, Cleavage and polyadenylation specificity factor subunit 4, humanhuman

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4O95639 SNORD12C-201ENST00000386307 89 ntBASIC0.12□□□□□ -2.39
CPSF4O95639 Y_RNA.645-201ENST00000391229 102 ntBASIC0.12□□□□□ -2.39
CPSF4O95639 SNORD71-201ENST00000411292 86 ntBASIC0.12□□□□□ -2.39
CPSF4O95639 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.12□□□□□ -2.39
CPSF4O95639 PMCHL1-202ENST00000423102 261 ntBASIC0.12□□□□□ -2.39
CPSF4O95639 MTND4P19-201ENST00000446659 478 ntBASIC0.12□□□□□ -2.39
CPSF4O95639 AL138752.1-201ENST00000452964 351 ntBASIC0.12□□□□□ -2.39
CPSF4O95639 MTCO2P24-201ENST00000515611 426 ntBASIC0.12□□□□□ -2.39
CPSF4O95639 RNU2-31P-201ENST00000516954 155 ntBASIC0.12□□□□□ -2.39
CPSF4O95639 RNU6-1270P-201ENST00000517128 108 ntBASIC0.12□□□□□ -2.39
CPSF4O95639 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.12□□□□□ -2.39
CPSF4O95639 MIR4795-201ENST00000584182 89 ntBASIC0.12□□□□□ -2.39
CPSF4O95639 SNORD92-201ENST00000585078 85 ntBASIC0.12□□□□□ -2.39
CPSF4O95639 MIR6515-201ENST00000619843 57 ntBASIC0.12□□□□□ -2.39
CPSF4O95639 AC090574.1-201ENST00000623186 233 ntBASIC0.12□□□□□ -2.39
CPSF4O95639 RNU6-349P-201ENST00000362402 107 ntBASIC0.11□□□□□ -2.39
CPSF4O95639 RNA5SP62-201ENST00000363457 110 ntBASIC0.11□□□□□ -2.39
CPSF4O95639 RNU6-450P-201ENST00000364654 107 ntBASIC0.11□□□□□ -2.39
CPSF4O95639 Y_RNA.394-201ENST00000383942 103 ntBASIC0.11□□□□□ -2.39
CPSF4O95639 RNU6-662P-201ENST00000384253 104 ntBASIC0.11□□□□□ -2.39
CPSF4O95639 MIR563-201ENST00000385080 79 ntBASIC0.11□□□□□ -2.39
CPSF4O95639 Y_RNA.581-201ENST00000391017 97 ntBASIC0.11□□□□□ -2.39
CPSF4O95639 RNU6-121P-201ENST00000410525 99 ntBASIC0.11□□□□□ -2.39
CPSF4O95639 MTND5P20-201ENST00000448677 143 ntBASIC0.11□□□□□ -2.39
CPSF4O95639 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC0.11□□□□□ -2.39
CPSF4O95639 AC100767.1-201ENST00000528178 123 ntBASIC0.11□□□□□ -2.39
CPSF4O95639 MIR3678-201ENST00000578455 94 ntBASIC0.11□□□□□ -2.39
CPSF4O95639 AC078938.1-201ENST00000620993 318 ntBASIC0.11□□□□□ -2.39
CPSF4O95639 MIR30D-201ENST00000362283 70 ntBASIC0.1□□□□□ -2.39
CPSF4O95639 Y_RNA.31-201ENST00000362574 102 ntBASIC0.1□□□□□ -2.39
CPSF4O95639 RNU6-888P-201ENST00000363010 101 ntBASIC0.1□□□□□ -2.39
CPSF4O95639 RNU4-73P-201ENST00000363164 141 ntBASIC0.1□□□□□ -2.39
CPSF4O95639 SNORD118-201ENST00000363593 134 ntBASIC0.1□□□□□ -2.39
CPSF4O95639 RNU4-10P-201ENST00000364383 140 ntBASIC0.1□□□□□ -2.39
CPSF4O95639 RNU6-290P-201ENST00000365212 101 ntBASIC0.1□□□□□ -2.39
CPSF4O95639 RNA5SP117-201ENST00000365294 118 ntBASIC0.1□□□□□ -2.39
CPSF4O95639 Y_RNA.395-201ENST00000383945 109 ntBASIC0.1□□□□□ -2.39
CPSF4O95639 RNU6-823P-201ENST00000391042 103 ntBASIC0.1□□□□□ -2.39
CPSF4O95639 AF228730.3-201ENST00000436691 102 ntBASIC0.1□□□□□ -2.39
CPSF4O95639 RNU2-11P-201ENST00000459191 187 ntBASIC0.1□□□□□ -2.39
CPSF4O95639 MTND3P22-201ENST00000510932 243 ntBASIC0.1□□□□□ -2.39
CPSF4O95639 RNU6-365P-201ENST00000517113 106 ntBASIC0.1□□□□□ -2.39
CPSF4O95639 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.1□□□□□ -2.39
CPSF4O95639 MIR4431-201ENST00000579990 94 ntBASIC0.1□□□□□ -2.39
CPSF4O95639 AL133255.1-201ENST00000606374 441 ntBASIC0.1□□□□□ -2.39
CPSF4O95639 AL008718.3-201ENST00000610217 321 ntBASIC0.1□□□□□ -2.39
CPSF4O95639 uc_338.16-201ENST00000621804 95 ntBASIC0.1□□□□□ -2.39
CPSF4O95639 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.1□□□□□ -2.39
CPSF4O95639 MIR369-201ENST00000362155 70 ntBASIC0.09□□□□□ -2.4
CPSF4O95639 Y_RNA.7-201ENST00000362352 102 ntBASIC0.09□□□□□ -2.4
CPSF4O95639 SNORD114-23-201ENST00000363536 72 ntBASIC0.09□□□□□ -2.4
CPSF4O95639 SNORA8.2-201ENST00000384372 139 ntBASIC0.09□□□□□ -2.4
CPSF4O95639 Y_RNA.541-201ENST00000384640 113 ntBASIC0.09□□□□□ -2.4
CPSF4O95639 Y_RNA.567-201ENST00000384736 106 ntBASIC0.09□□□□□ -2.4
CPSF4O95639 MT-TF-201ENST00000387314 71 ntBASIC0.09□□□□□ -2.4
CPSF4O95639 MIR526A2-201ENST00000390198 65 ntBASIC0.09□□□□□ -2.4
CPSF4O95639 SNORD77.3-201ENST00000391113 65 ntBASIC0.09□□□□□ -2.4
CPSF4O95639 MIR548I3-201ENST00000408378 149 ntBASIC0.09□□□□□ -2.4
CPSF4O95639 MIR1295A-201ENST00000408463 79 ntBASIC0.09□□□□□ -2.4
CPSF4O95639 snoU13.18-201ENST00000459483 104 ntBASIC0.09□□□□□ -2.4
CPSF4O95639 RNU7-96P-201ENST00000459535 64 ntBASIC0.09□□□□□ -2.4
CPSF4O95639 Y_RNA.631-201ENST00000459607 101 ntBASIC0.09□□□□□ -2.4
CPSF4O95639 RNU6-998P-201ENST00000515894 101 ntBASIC0.09□□□□□ -2.4
CPSF4O95639 Y_RNA.702-201ENST00000516843 96 ntBASIC0.09□□□□□ -2.4
CPSF4O95639 RNU6-448P-201ENST00000517052 107 ntBASIC0.09□□□□□ -2.4
CPSF4O95639 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.09□□□□□ -2.4
CPSF4O95639 Y_RNA.802-201ENST00000614892 130 ntBASIC0.09□□□□□ -2.4
CPSF4O95639 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.09□□□□□ -2.4
CPSF4O95639 AC090971.5-201ENST00000621102 293 ntBASIC0.09□□□□□ -2.4
CPSF4O95639 snoU18.1-201ENST00000629629 71 ntBASIC0.09□□□□□ -2.4
CPSF4O95639 MIR342-201ENST00000362212 99 ntBASIC0.08□□□□□ -2.4
CPSF4O95639 SNORA25.1-201ENST00000362326 128 ntBASIC0.08□□□□□ -2.4
CPSF4O95639 snoU2_19.2-201ENST00000363024 80 ntBASIC0.08□□□□□ -2.4
CPSF4O95639 Y_RNA.217-201ENST00000364214 105 ntBASIC0.08□□□□□ -2.4
CPSF4O95639 RNU6-326P-201ENST00000365480 107 ntBASIC0.08□□□□□ -2.4
CPSF4O95639 Y_RNA.380-201ENST00000365663 111 ntBASIC0.08□□□□□ -2.4
CPSF4O95639 RNU6-815P-201ENST00000384080 113 ntBASIC0.08□□□□□ -2.4
CPSF4O95639 RNU6-514P-201ENST00000384208 107 ntBASIC0.08□□□□□ -2.4
CPSF4O95639 Y_RNA.572-201ENST00000384757 98 ntBASIC0.08□□□□□ -2.4
CPSF4O95639 MIR215-201ENST00000384858 110 ntBASIC0.08□□□□□ -2.4
CPSF4O95639 MIR598-201ENST00000384868 97 ntBASIC0.08□□□□□ -2.4
CPSF4O95639 RNA5SP299-201ENST00000391203 116 ntBASIC0.08□□□□□ -2.4
CPSF4O95639 MIR1252-201ENST00000408861 65 ntBASIC0.08□□□□□ -2.4
CPSF4O95639 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.08□□□□□ -2.4
CPSF4O95639 Y_RNA.641-201ENST00000459414 105 ntBASIC0.08□□□□□ -2.4
CPSF4O95639 RNU6-504P-201ENST00000516568 104 ntBASIC0.08□□□□□ -2.4
CPSF4O95639 SNORA62.5-201ENST00000516634 120 ntBASIC0.08□□□□□ -2.4
CPSF4O95639 AC133485.4-201ENST00000561835 220 ntBASIC0.08□□□□□ -2.4
CPSF4O95639 AC006006.1-201ENST00000603082 144 ntBASIC0.08□□□□□ -2.4
CPSF4O95639 Y_RNA.24-201ENST00000362508 103 ntBASIC0.07□□□□□ -2.4
CPSF4O95639 Y_RNA.66-201ENST00000362862 102 ntBASIC0.07□□□□□ -2.4
CPSF4O95639 Y_RNA.269-201ENST00000364685 89 ntBASIC0.07□□□□□ -2.4
CPSF4O95639 SNORD42.2-201ENST00000365570 69 ntBASIC0.07□□□□□ -2.4
CPSF4O95639 Y_RNA.419-201ENST00000384041 102 ntBASIC0.07□□□□□ -2.4
CPSF4O95639 Y_RNA.440-201ENST00000384120 114 ntBASIC0.07□□□□□ -2.4
CPSF4O95639 RNU6-101P-201ENST00000410323 104 ntBASIC0.07□□□□□ -2.4
CPSF4O95639 AC073261.1-201ENST00000429409 121 ntBASIC0.07□□□□□ -2.4
CPSF4O95639 MTND4LP30-201ENST00000454092 297 ntBASIC0.07□□□□□ -2.4
CPSF4O95639 AC082651.2-201ENST00000496833 166 ntBASIC0.07□□□□□ -2.4
CPSF4O95639 SNORA27.4-201ENST00000516650 95 ntBASIC0.07□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms