Protein–RNA interactions for Protein: O95343

SIX3, Homeobox protein SIX3, humanhuman

Predicted RBP Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3O95343 RNU6-693P-201ENST00000516134 107 ntBASIC0.67□□□□□ -2.3
SIX3O95343 RNU6-977P-201ENST00000516411 103 ntBASIC0.67□□□□□ -2.3
SIX3O95343 SNORA27.4-201ENST00000516650 95 ntBASIC0.67□□□□□ -2.3
SIX3O95343 RNU6-126P-201ENST00000516685 103 ntBASIC0.67□□□□□ -2.3
SIX3O95343 Y_RNA.711-201ENST00000516993 102 ntBASIC0.67□□□□□ -2.3
SIX3O95343 AC113195.1-201ENST00000579952 141 ntBASIC0.67□□□□□ -2.3
SIX3O95343 MIR3171-201ENST00000584270 74 ntBASIC0.67□□□□□ -2.3
SIX3O95343 Y_RNA.64-201ENST00000362845 102 ntBASIC0.66□□□□□ -2.3
SIX3O95343 snoU2_19.2-201ENST00000363024 80 ntBASIC0.66□□□□□ -2.3
SIX3O95343 Y_RNA.138-201ENST00000363462 102 ntBASIC0.66□□□□□ -2.3
SIX3O95343 RNU6-1138P-201ENST00000365359 106 ntBASIC0.66□□□□□ -2.3
SIX3O95343 SNORA2A-201ENST00000383885 135 ntBASIC0.66□□□□□ -2.3
SIX3O95343 AC087499.4-201ENST00000448505 178 ntBASIC0.66□□□□□ -2.3
SIX3O95343 COX6CP6-201ENST00000490840 228 ntBASIC0.66□□□□□ -2.3
SIX3O95343 RNU6-365P-201ENST00000517113 106 ntBASIC0.66□□□□□ -2.3
SIX3O95343 AC100767.1-201ENST00000528178 123 ntBASIC0.66□□□□□ -2.3
SIX3O95343 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.66□□□□□ -2.3
SIX3O95343 MIR4264-201ENST00000583520 66 ntBASIC0.66□□□□□ -2.3
SIX3O95343 AC243829.3-201ENST00000622177 108 ntBASIC0.66□□□□□ -2.3
SIX3O95343 snoU18.1-201ENST00000629629 71 ntBASIC0.66□□□□□ -2.3
SIX3O95343 SNORD115-34-201ENST00000362441 82 ntBASIC0.65□□□□□ -2.31
SIX3O95343 SNORD115-12-201ENST00000362583 82 ntBASIC0.65□□□□□ -2.31
SIX3O95343 SNORD115-29-201ENST00000362834 82 ntBASIC0.65□□□□□ -2.31
SIX3O95343 SNORD115-9-201ENST00000362912 82 ntBASIC0.65□□□□□ -2.31
SIX3O95343 SNORD115-21-201ENST00000362963 81 ntBASIC0.65□□□□□ -2.31
SIX3O95343 SNORD115-14-201ENST00000363090 81 ntBASIC0.65□□□□□ -2.31
SIX3O95343 SNORD115-13-201ENST00000363358 82 ntBASIC0.65□□□□□ -2.31
SIX3O95343 SNORD115-41-201ENST00000363608 82 ntBASIC0.65□□□□□ -2.31
SIX3O95343 SNORD115-11-201ENST00000363616 82 ntBASIC0.65□□□□□ -2.31
SIX3O95343 SNORD115-5-201ENST00000363633 82 ntBASIC0.65□□□□□ -2.31
SIX3O95343 SNORD115-39-201ENST00000363694 82 ntBASIC0.65□□□□□ -2.31
SIX3O95343 SNORD115-4-201ENST00000363810 82 ntBASIC0.65□□□□□ -2.31
SIX3O95343 SNORD115-16-201ENST00000363887 82 ntBASIC0.65□□□□□ -2.31
SIX3O95343 SNORD115-6-201ENST00000363942 82 ntBASIC0.65□□□□□ -2.31
SIX3O95343 Y_RNA.216-201ENST00000364205 93 ntBASIC0.65□□□□□ -2.31
SIX3O95343 SNORD115-42-201ENST00000364273 82 ntBASIC0.65□□□□□ -2.31
SIX3O95343 RNU4-10P-201ENST00000364383 140 ntBASIC0.65□□□□□ -2.31
SIX3O95343 Y_RNA.276-201ENST00000364732 109 ntBASIC0.65□□□□□ -2.31
SIX3O95343 SNORD115-15-201ENST00000364809 81 ntBASIC0.65□□□□□ -2.31
SIX3O95343 SNORD115-1-201ENST00000364961 82 ntBASIC0.65□□□□□ -2.31
SIX3O95343 SNORD115-26-201ENST00000365067 82 ntBASIC0.65□□□□□ -2.31
SIX3O95343 SNORD115-10-201ENST00000365073 81 ntBASIC0.65□□□□□ -2.31
SIX3O95343 RNU6-806P-201ENST00000365147 105 ntBASIC0.65□□□□□ -2.31
SIX3O95343 RNU6-934P-201ENST00000365154 107 ntBASIC0.65□□□□□ -2.31
SIX3O95343 SNORD115-43-201ENST00000365503 82 ntBASIC0.65□□□□□ -2.31
SIX3O95343 SNORD115-36-201ENST00000365629 82 ntBASIC0.65□□□□□ -2.31
SIX3O95343 SNORA8.3-201ENST00000384679 139 ntBASIC0.65□□□□□ -2.31
SIX3O95343 MT-TN-201ENST00000387400 73 ntBASIC0.65□□□□□ -2.31
SIX3O95343 AL731563.1-201ENST00000442202 214 ntBASIC0.65□□□□□ -2.31
SIX3O95343 SNORD77.4-201ENST00000516158 81 ntBASIC0.65□□□□□ -2.31
SIX3O95343 SNORA62.5-201ENST00000516634 120 ntBASIC0.65□□□□□ -2.31
SIX3O95343 Y_RNA.700-201ENST00000516806 100 ntBASIC0.65□□□□□ -2.31
SIX3O95343 SNORD115-40-201ENST00000606510 82 ntBASIC0.65□□□□□ -2.31
SIX3O95343 MIR6835-201ENST00000621552 64 ntBASIC0.65□□□□□ -2.31
SIX3O95343 AC067863.3-201ENST00000624172 122 ntBASIC0.65□□□□□ -2.31
SIX3O95343 Y_RNA.16-201ENST00000362421 102 ntBASIC0.64□□□□□ -2.31
SIX3O95343 Y_RNA.24-201ENST00000362508 103 ntBASIC0.64□□□□□ -2.31
SIX3O95343 MIR520F-201ENST00000384824 87 ntBASIC0.64□□□□□ -2.31
SIX3O95343 MIR508-201ENST00000384857 115 ntBASIC0.64□□□□□ -2.31
SIX3O95343 MIR526A2-201ENST00000390198 65 ntBASIC0.64□□□□□ -2.31
SIX3O95343 SNORD83.1-201ENST00000411362 77 ntBASIC0.64□□□□□ -2.31
SIX3O95343 RNU7-53P-201ENST00000516705 60 ntBASIC0.64□□□□□ -2.31
SIX3O95343 RNU6-1270P-201ENST00000517128 108 ntBASIC0.64□□□□□ -2.31
SIX3O95343 MIR4771-2-201ENST00000577758 74 ntBASIC0.64□□□□□ -2.31
SIX3O95343 MIR4680-201ENST00000580906 66 ntBASIC0.64□□□□□ -2.31
SIX3O95343 MIR4771-1-201ENST00000582617 74 ntBASIC0.64□□□□□ -2.31
SIX3O95343 AL021707.8-201ENST00000609428 183 ntBASIC0.64□□□□□ -2.31
SIX3O95343 HSBP1P2-201ENST00000299671 229 ntBASIC0.63□□□□□ -2.31
SIX3O95343 MIR377-201ENST00000362145 69 ntBASIC0.63□□□□□ -2.31
SIX3O95343 Y_RNA.486-201ENST00000384398 107 ntBASIC0.63□□□□□ -2.31
SIX3O95343 SNORD38B-201ENST00000384690 67 ntBASIC0.63□□□□□ -2.31
SIX3O95343 RNU6-713P-201ENST00000384761 107 ntBASIC0.63□□□□□ -2.31
SIX3O95343 SNORA26-201ENST00000391286 122 ntBASIC0.63□□□□□ -2.31
SIX3O95343 RNU7-62P-201ENST00000458856 62 ntBASIC0.63□□□□□ -2.31
SIX3O95343 SERF1AP1-201ENST00000514575 187 ntBASIC0.63□□□□□ -2.31
SIX3O95343 RNU6-570P-201ENST00000517051 105 ntBASIC0.63□□□□□ -2.31
SIX3O95343 SNORD38B-202ENST00000625943 69 ntBASIC0.63□□□□□ -2.31
SIX3O95343 Y_RNA.571-201ENST00000384753 98 ntBASIC0.62□□□□□ -2.31
SIX3O95343 SNORA40.5-201ENST00000391061 128 ntBASIC0.62□□□□□ -2.31
SIX3O95343 RNA5SP266-201ENST00000410273 108 ntBASIC0.62□□□□□ -2.31
SIX3O95343 RNU2-70P-201ENST00000410718 179 ntBASIC0.62□□□□□ -2.31
SIX3O95343 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.62□□□□□ -2.31
SIX3O95343 MTCO2P24-201ENST00000515611 426 ntBASIC0.62□□□□□ -2.31
SIX3O95343 RNU2-13P-201ENST00000515909 113 ntBASIC0.62□□□□□ -2.31
SIX3O95343 AP003484.1-201ENST00000530974 250 ntBASIC0.62□□□□□ -2.31
SIX3O95343 MIR4802-201ENST00000581881 80 ntBASIC0.62□□□□□ -2.31
SIX3O95343 AL356055.1-201ENST00000602528 446 ntBASIC0.62□□□□□ -2.31
SIX3O95343 AL008718.3-201ENST00000610217 321 ntBASIC0.62□□□□□ -2.31
SIX3O95343 Y_RNA.26-201ENST00000362539 101 ntBASIC0.61□□□□□ -2.31
SIX3O95343 RNU6-797P-201ENST00000363101 109 ntBASIC0.61□□□□□ -2.31
SIX3O95343 Y_RNA.217-201ENST00000364214 105 ntBASIC0.61□□□□□ -2.31
SIX3O95343 SNORA63C-201ENST00000364578 129 ntBASIC0.61□□□□□ -2.31
SIX3O95343 SNORA27-201ENST00000384323 126 ntBASIC0.61□□□□□ -2.31
SIX3O95343 RNU6-1289P-201ENST00000384431 106 ntBASIC0.61□□□□□ -2.31
SIX3O95343 RNU6-125P-201ENST00000384505 107 ntBASIC0.61□□□□□ -2.31
SIX3O95343 MIR520H-201ENST00000385126 88 ntBASIC0.61□□□□□ -2.31
SIX3O95343 Y_RNA.641-201ENST00000459414 105 ntBASIC0.61□□□□□ -2.31
SIX3O95343 RNU4-54P-201ENST00000516428 129 ntBASIC0.61□□□□□ -2.31
SIX3O95343 RNU6-504P-201ENST00000516568 104 ntBASIC0.61□□□□□ -2.31
SIX3O95343 AC004812.1-201ENST00000540773 146 ntBASIC0.61□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms