Protein–RNA interactions for Protein: O15259

NPHP1, Nephrocystin-1, humanhuman

Predictions only

Length 732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1O15259 Y_RNA.650-201ENST00000459002 102 ntBASIC0.95□□□□□ -2.26
NPHP1O15259 Y_RNA.777-201ENST00000516982 102 ntBASIC0.95□□□□□ -2.26
NPHP1O15259 AC007751.1-201ENST00000529260 376 ntBASIC0.95□□□□□ -2.26
NPHP1O15259 AL117187.1-201ENST00000555482 181 ntBASIC0.95□□□□□ -2.26
NPHP1O15259 MIR1273G-201ENST00000577677 100 ntBASIC0.95□□□□□ -2.26
NPHP1O15259 Y_RNA.771-201ENST00000598668 102 ntBASIC0.95□□□□□ -2.26
NPHP1O15259 Y_RNA.789-201ENST00000622480 102 ntBASIC0.95□□□□□ -2.26
NPHP1O15259 U6.104-201ENST00000637979 90 ntBASIC0.95□□□□□ -2.26
NPHP1O15259 MIR377-201ENST00000362145 69 ntBASIC0.94□□□□□ -2.26
NPHP1O15259 Y_RNA.229-201ENST00000364347 113 ntBASIC0.94□□□□□ -2.26
NPHP1O15259 Y_RNA.486-201ENST00000384398 107 ntBASIC0.94□□□□□ -2.26
NPHP1O15259 MIR146A-201ENST00000385201 99 ntBASIC0.94□□□□□ -2.26
NPHP1O15259 Y_RNA.587-201ENST00000391210 103 ntBASIC0.94□□□□□ -2.26
NPHP1O15259 MIR1827-201ENST00000408549 66 ntBASIC0.94□□□□□ -2.26
NPHP1O15259 RPS26P5-201ENST00000418544 335 ntBASIC0.94□□□□□ -2.26
NPHP1O15259 AC100767.1-201ENST00000528178 123 ntBASIC0.94□□□□□ -2.26
NPHP1O15259 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.94□□□□□ -2.26
NPHP1O15259 AL136317.1-201ENST00000612653 226 ntBASIC0.94□□□□□ -2.26
NPHP1O15259 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
NPHP1O15259 SNORD115-34-201ENST00000362441 82 ntBASIC0.93□□□□□ -2.26
NPHP1O15259 SNORD115-12-201ENST00000362583 82 ntBASIC0.93□□□□□ -2.26
NPHP1O15259 SNORD115-29-201ENST00000362834 82 ntBASIC0.93□□□□□ -2.26
NPHP1O15259 SNORD115-9-201ENST00000362912 82 ntBASIC0.93□□□□□ -2.26
NPHP1O15259 SNORD115-21-201ENST00000362963 81 ntBASIC0.93□□□□□ -2.26
NPHP1O15259 SNORD115-14-201ENST00000363090 81 ntBASIC0.93□□□□□ -2.26
NPHP1O15259 SNORD115-13-201ENST00000363358 82 ntBASIC0.93□□□□□ -2.26
NPHP1O15259 SNORD114-23-201ENST00000363536 72 ntBASIC0.93□□□□□ -2.26
NPHP1O15259 SNORD115-41-201ENST00000363608 82 ntBASIC0.93□□□□□ -2.26
NPHP1O15259 SNORD115-11-201ENST00000363616 82 ntBASIC0.93□□□□□ -2.26
NPHP1O15259 SNORD115-5-201ENST00000363633 82 ntBASIC0.93□□□□□ -2.26
NPHP1O15259 SNORD115-39-201ENST00000363694 82 ntBASIC0.93□□□□□ -2.26
NPHP1O15259 SNORD115-4-201ENST00000363810 82 ntBASIC0.93□□□□□ -2.26
NPHP1O15259 Y_RNA.176-201ENST00000363815 109 ntBASIC0.93□□□□□ -2.26
NPHP1O15259 SNORD115-16-201ENST00000363887 82 ntBASIC0.93□□□□□ -2.26
NPHP1O15259 SNORD115-28-201ENST00000363931 81 ntBASIC0.93□□□□□ -2.26
NPHP1O15259 SNORD115-6-201ENST00000363942 82 ntBASIC0.93□□□□□ -2.26
NPHP1O15259 SNORD115-42-201ENST00000364273 82 ntBASIC0.93□□□□□ -2.26
NPHP1O15259 SNORD115-15-201ENST00000364809 81 ntBASIC0.93□□□□□ -2.26
NPHP1O15259 SNORD115-1-201ENST00000364961 82 ntBASIC0.93□□□□□ -2.26
NPHP1O15259 SNORD115-26-201ENST00000365067 82 ntBASIC0.93□□□□□ -2.26
NPHP1O15259 SNORD115-10-201ENST00000365073 81 ntBASIC0.93□□□□□ -2.26
NPHP1O15259 SNORD115-43-201ENST00000365503 82 ntBASIC0.93□□□□□ -2.26
NPHP1O15259 SNORD115-36-201ENST00000365629 82 ntBASIC0.93□□□□□ -2.26
NPHP1O15259 Y_RNA.494-201ENST00000384432 111 ntBASIC0.93□□□□□ -2.26
NPHP1O15259 SNORD99-201ENST00000408612 74 ntBASIC0.93□□□□□ -2.26
NPHP1O15259 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.93□□□□□ -2.26
NPHP1O15259 AC107297.1-201ENST00000459991 176 ntBASIC0.93□□□□□ -2.26
NPHP1O15259 SNORD115-40-201ENST00000606510 82 ntBASIC0.93□□□□□ -2.26
NPHP1O15259 AC104465.1-201ENST00000611365 139 ntBASIC0.93□□□□□ -2.26
NPHP1O15259 Y_RNA.241-201ENST00000364470 117 ntBASIC0.92□□□□□ -2.26
NPHP1O15259 RNU6-580P-201ENST00000365159 107 ntBASIC0.92□□□□□ -2.26
NPHP1O15259 AL606490.4-201ENST00000423117 127 ntBASIC0.92□□□□□ -2.26
NPHP1O15259 AC087499.4-201ENST00000448505 178 ntBASIC0.92□□□□□ -2.26
NPHP1O15259 RNU6-351P-201ENST00000516097 100 ntBASIC0.92□□□□□ -2.26
NPHP1O15259 MIR4282-201ENST00000583613 67 ntBASIC0.92□□□□□ -2.26
NPHP1O15259 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.92□□□□□ -2.26
NPHP1O15259 AC023934.1-201ENST00000574529 2389 ntBASIC0.91□□□□□ -2.26
NPHP1O15259 SNORD45.3-201ENST00000363836 72 ntBASIC0.91□□□□□ -2.26
NPHP1O15259 Y_RNA.396-201ENST00000383949 103 ntBASIC0.91□□□□□ -2.26
NPHP1O15259 RNU6-125P-201ENST00000384505 107 ntBASIC0.91□□□□□ -2.26
NPHP1O15259 MIR936-201ENST00000401264 98 ntBASIC0.91□□□□□ -2.26
NPHP1O15259 Y_RNA.590-201ENST00000410140 107 ntBASIC0.91□□□□□ -2.26
NPHP1O15259 AL358176.2-201ENST00000425769 204 ntBASIC0.91□□□□□ -2.26
NPHP1O15259 snoU13.16-201ENST00000459350 104 ntBASIC0.91□□□□□ -2.26
NPHP1O15259 RNU6-126P-201ENST00000516685 103 ntBASIC0.91□□□□□ -2.26
NPHP1O15259 Y_RNA.47-201ENST00000362697 108 ntBASIC0.9□□□□□ -2.27
NPHP1O15259 Y_RNA.459-201ENST00000384251 102 ntBASIC0.9□□□□□ -2.27
NPHP1O15259 RNU6-110P-201ENST00000384508 104 ntBASIC0.9□□□□□ -2.27
NPHP1O15259 MIR548A2-201ENST00000384956 97 ntBASIC0.9□□□□□ -2.27
NPHP1O15259 MIR518F-201ENST00000384973 87 ntBASIC0.9□□□□□ -2.27
NPHP1O15259 AP000942.4-201ENST00000604811 241 ntBASIC0.9□□□□□ -2.27
NPHP1O15259 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.9□□□□□ -2.27
NPHP1O15259 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
NPHP1O15259 RNA5SP347-201ENST00000362445 119 ntBASIC0.89□□□□□ -2.27
NPHP1O15259 SNORD24-201ENST00000383884 75 ntBASIC0.89□□□□□ -2.27
NPHP1O15259 SNORD61-201ENST00000384252 73 ntBASIC0.89□□□□□ -2.27
NPHP1O15259 RNU2-55P-201ENST00000411146 174 ntBASIC0.89□□□□□ -2.27
NPHP1O15259 RNU6-938P-201ENST00000411285 103 ntBASIC0.89□□□□□ -2.27
NPHP1O15259 RNU6-693P-201ENST00000516134 107 ntBASIC0.89□□□□□ -2.27
NPHP1O15259 RNU6-365P-201ENST00000517113 106 ntBASIC0.89□□□□□ -2.27
NPHP1O15259 AC004812.1-201ENST00000540773 146 ntBASIC0.89□□□□□ -2.27
NPHP1O15259 AP000753.3-201ENST00000604083 169 ntBASIC0.89□□□□□ -2.27
NPHP1O15259 AL360085.1-201ENST00000604713 532 ntBASIC0.89□□□□□ -2.27
NPHP1O15259 AC134878.1-201ENST00000619901 243 ntBASIC0.89□□□□□ -2.27
NPHP1O15259 MIR1-1-201ENST00000362147 71 ntBASIC0.88□□□□□ -2.27
NPHP1O15259 Y_RNA.37-201ENST00000362606 108 ntBASIC0.88□□□□□ -2.27
NPHP1O15259 Y_RNA.149-201ENST00000363558 117 ntBASIC0.88□□□□□ -2.27
NPHP1O15259 snoU2_19.4-201ENST00000364329 80 ntBASIC0.88□□□□□ -2.27
NPHP1O15259 Y_RNA.304-201ENST00000365011 112 ntBASIC0.88□□□□□ -2.27
NPHP1O15259 Y_RNA.352-201ENST00000365439 102 ntBASIC0.88□□□□□ -2.27
NPHP1O15259 RNY3P5-201ENST00000384127 102 ntBASIC0.88□□□□□ -2.27
NPHP1O15259 MT-TT-201ENST00000387460 66 ntBASIC0.88□□□□□ -2.27
NPHP1O15259 RNU6-205P-201ENST00000390858 107 ntBASIC0.88□□□□□ -2.27
NPHP1O15259 AC090844.1-201ENST00000422019 156 ntBASIC0.88□□□□□ -2.27
NPHP1O15259 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.88□□□□□ -2.27
NPHP1O15259 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.88□□□□□ -2.27
NPHP1O15259 RNU7-67P-201ENST00000459003 62 ntBASIC0.88□□□□□ -2.27
NPHP1O15259 COX6CP6-201ENST00000490840 228 ntBASIC0.88□□□□□ -2.27
NPHP1O15259 Y_RNA.679-201ENST00000516416 91 ntBASIC0.88□□□□□ -2.27
NPHP1O15259 MIR4643-201ENST00000577473 78 ntBASIC0.88□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms