Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 COX6CP6-201ENST00000490840 228 ntBASIC0.58□□□□□ -2.32
PDLIM1O00151 RNA5SP220-201ENST00000516298 104 ntBASIC0.58□□□□□ -2.32
PDLIM1O00151 SNORA18.4-201ENST00000516440 124 ntBASIC0.58□□□□□ -2.32
PDLIM1O00151 RNU6-635P-201ENST00000516651 102 ntBASIC0.58□□□□□ -2.32
PDLIM1O00151 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.58□□□□□ -2.32
PDLIM1O00151 AC133485.1-201ENST00000567176 124 ntBASIC0.58□□□□□ -2.32
PDLIM1O00151 AC138907.6-201ENST00000568401 126 ntBASIC0.58□□□□□ -2.32
PDLIM1O00151 AP000942.4-201ENST00000604811 241 ntBASIC0.58□□□□□ -2.32
PDLIM1O00151 uc_338.17-201ENST00000619633 179 ntBASIC0.58□□□□□ -2.32
PDLIM1O00151 MIR6734-201ENST00000621166 68 ntBASIC0.58□□□□□ -2.32
PDLIM1O00151 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
PDLIM1O00151 SNORD45.3-201ENST00000363836 72 ntBASIC0.57□□□□□ -2.32
PDLIM1O00151 RNU6-580P-201ENST00000365159 107 ntBASIC0.57□□□□□ -2.32
PDLIM1O00151 Y_RNA.354-201ENST00000365448 111 ntBASIC0.57□□□□□ -2.32
PDLIM1O00151 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
PDLIM1O00151 Y_RNA.422-201ENST00000384054 114 ntBASIC0.57□□□□□ -2.32
PDLIM1O00151 SNORD38B-201ENST00000384690 67 ntBASIC0.57□□□□□ -2.32
PDLIM1O00151 RNA5SP222-201ENST00000411039 105 ntBASIC0.57□□□□□ -2.32
PDLIM1O00151 RNU6-938P-201ENST00000411285 103 ntBASIC0.57□□□□□ -2.32
PDLIM1O00151 SNORD83.1-201ENST00000411362 77 ntBASIC0.57□□□□□ -2.32
PDLIM1O00151 snoU13.21-201ENST00000459368 105 ntBASIC0.57□□□□□ -2.32
PDLIM1O00151 RNU6-977P-201ENST00000516411 103 ntBASIC0.57□□□□□ -2.32
PDLIM1O00151 Y_RNA.679-201ENST00000516416 91 ntBASIC0.57□□□□□ -2.32
PDLIM1O00151 RNA5SP121-201ENST00000516537 101 ntBASIC0.57□□□□□ -2.32
PDLIM1O00151 RNU7-53P-201ENST00000516705 60 ntBASIC0.57□□□□□ -2.32
PDLIM1O00151 AC004812.1-201ENST00000540773 146 ntBASIC0.57□□□□□ -2.32
PDLIM1O00151 Z83818.1-201ENST00000603584 150 ntBASIC0.57□□□□□ -2.32
PDLIM1O00151 AC022709.1-201ENST00000615967 87 ntBASIC0.57□□□□□ -2.32
PDLIM1O00151 SNORD38B-202ENST00000625943 69 ntBASIC0.57□□□□□ -2.32
PDLIM1O00151 U6.104-201ENST00000637979 90 ntBASIC0.57□□□□□ -2.32
PDLIM1O00151 Y_RNA.512-201ENST00000384518 102 ntBASIC0.56□□□□□ -2.32
PDLIM1O00151 Y_RNA.590-201ENST00000410140 107 ntBASIC0.56□□□□□ -2.32
PDLIM1O00151 Y_RNA.622-201ENST00000411091 108 ntBASIC0.56□□□□□ -2.32
PDLIM1O00151 RPS29P24-201ENST00000486345 171 ntBASIC0.56□□□□□ -2.32
PDLIM1O00151 SNORD36C-201ENST00000516733 66 ntBASIC0.56□□□□□ -2.32
PDLIM1O00151 AP001282.2-201ENST00000616149 309 ntBASIC0.56□□□□□ -2.32
PDLIM1O00151 RNU6-888P-201ENST00000363010 101 ntBASIC0.55□□□□□ -2.32
PDLIM1O00151 Y_RNA.122-201ENST00000363331 96 ntBASIC0.55□□□□□ -2.32
PDLIM1O00151 Y_RNA.199-201ENST00000364014 102 ntBASIC0.55□□□□□ -2.32
PDLIM1O00151 Y_RNA.355-201ENST00000365462 98 ntBASIC0.55□□□□□ -2.32
PDLIM1O00151 SNORA36.2-201ENST00000384004 127 ntBASIC0.55□□□□□ -2.32
PDLIM1O00151 MIR520F-201ENST00000384824 87 ntBASIC0.55□□□□□ -2.32
PDLIM1O00151 MT-TT-201ENST00000387460 66 ntBASIC0.55□□□□□ -2.32
PDLIM1O00151 RNU6-913P-201ENST00000390913 95 ntBASIC0.55□□□□□ -2.32
PDLIM1O00151 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.55□□□□□ -2.32
PDLIM1O00151 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.55□□□□□ -2.32
PDLIM1O00151 MIR1302-6-201ENST00000408466 90 ntBASIC0.55□□□□□ -2.32
PDLIM1O00151 RNU2-55P-201ENST00000411146 174 ntBASIC0.55□□□□□ -2.32
PDLIM1O00151 AC244098.3-201ENST00000424803 96 ntBASIC0.55□□□□□ -2.32
PDLIM1O00151 AC244023.1-201ENST00000426884 112 ntBASIC0.55□□□□□ -2.32
PDLIM1O00151 RNU7-73P-201ENST00000458743 63 ntBASIC0.55□□□□□ -2.32
PDLIM1O00151 RNU7-62P-201ENST00000458856 62 ntBASIC0.55□□□□□ -2.32
PDLIM1O00151 MTATP8P1-201ENST00000467115 207 ntBASIC0.55□□□□□ -2.32
PDLIM1O00151 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.55□□□□□ -2.32
PDLIM1O00151 MIR4771-2-201ENST00000577758 74 ntBASIC0.55□□□□□ -2.32
PDLIM1O00151 MIR4771-1-201ENST00000582617 74 ntBASIC0.55□□□□□ -2.32
PDLIM1O00151 AC242498.1-201ENST00000604134 111 ntBASIC0.55□□□□□ -2.32
PDLIM1O00151 MIR342-201ENST00000362212 99 ntBASIC0.54□□□□□ -2.32
PDLIM1O00151 Y_RNA.7-201ENST00000362352 102 ntBASIC0.54□□□□□ -2.32
PDLIM1O00151 Y_RNA.269-201ENST00000364685 89 ntBASIC0.54□□□□□ -2.32
PDLIM1O00151 Y_RNA.432-201ENST00000384087 111 ntBASIC0.54□□□□□ -2.32
PDLIM1O00151 MIR548A2-201ENST00000384956 97 ntBASIC0.54□□□□□ -2.32
PDLIM1O00151 AC015818.7-201ENST00000428754 109 ntBASIC0.54□□□□□ -2.32
PDLIM1O00151 AF228730.3-201ENST00000436691 102 ntBASIC0.54□□□□□ -2.32
PDLIM1O00151 AC087499.7-201ENST00000441958 109 ntBASIC0.54□□□□□ -2.32
PDLIM1O00151 AL138752.1-201ENST00000452964 351 ntBASIC0.54□□□□□ -2.32
PDLIM1O00151 AL157398.1-201ENST00000452981 186 ntBASIC0.54□□□□□ -2.32
PDLIM1O00151 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.53□□□□□ -2.32
PDLIM1O00151 Y_RNA.91-201ENST00000363042 107 ntBASIC0.53□□□□□ -2.32
PDLIM1O00151 RNU6-1309P-201ENST00000363305 108 ntBASIC0.53□□□□□ -2.32
PDLIM1O00151 SNORA1.1-201ENST00000364671 133 ntBASIC0.53□□□□□ -2.32
PDLIM1O00151 Y_RNA.634-201ENST00000364811 113 ntBASIC0.53□□□□□ -2.32
PDLIM1O00151 RNU1-133P-201ENST00000364867 167 ntBASIC0.53□□□□□ -2.32
PDLIM1O00151 RNY3P5-201ENST00000384127 102 ntBASIC0.53□□□□□ -2.32
PDLIM1O00151 RNU6-42P-201ENST00000384165 107 ntBASIC0.53□□□□□ -2.32
PDLIM1O00151 MIR520H-201ENST00000385126 88 ntBASIC0.53□□□□□ -2.32
PDLIM1O00151 AL606845.1-201ENST00000404881 255 ntBASIC0.53□□□□□ -2.32
PDLIM1O00151 RNU6-651P-201ENST00000411040 105 ntBASIC0.53□□□□□ -2.32
PDLIM1O00151 HMGN1P33-201ENST00000432945 451 ntBASIC0.53□□□□□ -2.32
PDLIM1O00151 SNRPGP8-201ENST00000454064 226 ntBASIC0.53□□□□□ -2.32
PDLIM1O00151 RNU4-54P-201ENST00000516428 129 ntBASIC0.53□□□□□ -2.32
PDLIM1O00151 Y_RNA.720-201ENST00000517166 92 ntBASIC0.53□□□□□ -2.32
PDLIM1O00151 AP003072.1-201ENST00000531740 145 ntBASIC0.53□□□□□ -2.32
PDLIM1O00151 AC006504.6-201ENST00000590142 199 ntBASIC0.53□□□□□ -2.32
PDLIM1O00151 MIR8055-201ENST00000610739 97 ntBASIC0.53□□□□□ -2.32
PDLIM1O00151 U2.14-201ENST00000615943 113 ntBASIC0.53□□□□□ -2.32
PDLIM1O00151 SNORA63C-201ENST00000364578 129 ntBASIC0.52□□□□□ -2.33
PDLIM1O00151 RNU6-1189P-201ENST00000383958 107 ntBASIC0.52□□□□□ -2.33
PDLIM1O00151 Y_RNA.410-201ENST00000383992 113 ntBASIC0.52□□□□□ -2.33
PDLIM1O00151 Y_RNA.508-201ENST00000384502 114 ntBASIC0.52□□□□□ -2.33
PDLIM1O00151 SNORD77.3-201ENST00000391113 65 ntBASIC0.52□□□□□ -2.33
PDLIM1O00151 RNU2-11P-201ENST00000459191 187 ntBASIC0.52□□□□□ -2.33
PDLIM1O00151 RNA5SP153-201ENST00000516498 76 ntBASIC0.52□□□□□ -2.33
PDLIM1O00151 RNU6-453P-201ENST00000516819 85 ntBASIC0.52□□□□□ -2.33
PDLIM1O00151 Z97988.1-201ENST00000637697 135 ntBASIC0.52□□□□□ -2.33
PDLIM1O00151 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.52□□□□□ -2.33
PDLIM1O00151 MIR302B-201ENST00000362188 73 ntBASIC0.51□□□□□ -2.33
PDLIM1O00151 RNU6-369P-201ENST00000362515 102 ntBASIC0.51□□□□□ -2.33
PDLIM1O00151 Y_RNA.66-201ENST00000362862 102 ntBASIC0.51□□□□□ -2.33
PDLIM1O00151 Y_RNA.82-201ENST00000363000 102 ntBASIC0.51□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 126.9 ms