Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 AL121890.5-201ENST00000620848 304 ntBASIC1.44□□□□□ -2.18
SNX9Q9Y5X1 Y_RNA.272-201ENST00000364696 102 ntBASIC1.43□□□□□ -2.18
SNX9Q9Y5X1 SNORA2.2-201ENST00000365473 135 ntBASIC1.43□□□□□ -2.18
SNX9Q9Y5X1 RNA5SP259-201ENST00000365541 109 ntBASIC1.43□□□□□ -2.18
SNX9Q9Y5X1 SNORA1-201ENST00000384107 130 ntBASIC1.43□□□□□ -2.18
SNX9Q9Y5X1 SNORD26-201ENST00000384147 75 ntBASIC1.43□□□□□ -2.18
SNX9Q9Y5X1 Y_RNA.464-201ENST00000384282 110 ntBASIC1.43□□□□□ -2.18
SNX9Q9Y5X1 MIR516B2-201ENST00000385190 85 ntBASIC1.43□□□□□ -2.18
SNX9Q9Y5X1 RNU6-239P-201ENST00000390990 99 ntBASIC1.43□□□□□ -2.18
SNX9Q9Y5X1 SNORA26-201ENST00000391286 122 ntBASIC1.43□□□□□ -2.18
SNX9Q9Y5X1 MIR548O-201ENST00000408583 114 ntBASIC1.43□□□□□ -2.18
SNX9Q9Y5X1 RNU6-938P-201ENST00000411285 103 ntBASIC1.43□□□□□ -2.18
SNX9Q9Y5X1 AC006461.1-201ENST00000412637 326 ntBASIC1.43□□□□□ -2.18
SNX9Q9Y5X1 RNU1-123P-201ENST00000458950 160 ntBASIC1.43□□□□□ -2.18
SNX9Q9Y5X1 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.43□□□□□ -2.18
SNX9Q9Y5X1 RNU6-693P-201ENST00000516134 107 ntBASIC1.43□□□□□ -2.18
SNX9Q9Y5X1 RNU6-1212P-201ENST00000517023 104 ntBASIC1.43□□□□□ -2.18
SNX9Q9Y5X1 AC090049.2-201ENST00000550377 109 ntBASIC1.43□□□□□ -2.18
SNX9Q9Y5X1 AL157834.3-201ENST00000615543 103 ntBASIC1.43□□□□□ -2.18
SNX9Q9Y5X1 MIR8063-201ENST00000621930 81 ntBASIC1.43□□□□□ -2.18
SNX9Q9Y5X1 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
SNX9Q9Y5X1 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.43□□□□□ -2.18
SNX9Q9Y5X1 Y_RNA.580-201ENST00000391004 95 ntBASIC1.42□□□□□ -2.18
SNX9Q9Y5X1 AF228730.3-201ENST00000436691 102 ntBASIC1.42□□□□□ -2.18
SNX9Q9Y5X1 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.42□□□□□ -2.18
SNX9Q9Y5X1 MIR3144-201ENST00000579460 79 ntBASIC1.42□□□□□ -2.18
SNX9Q9Y5X1 MIR4781-201ENST00000585250 76 ntBASIC1.42□□□□□ -2.18
SNX9Q9Y5X1 MIR337-201ENST00000362281 93 ntBASIC1.41□□□□□ -2.18
SNX9Q9Y5X1 RNU6-818P-201ENST00000364837 108 ntBASIC1.41□□□□□ -2.18
SNX9Q9Y5X1 RNU6-597P-201ENST00000365620 102 ntBASIC1.41□□□□□ -2.18
SNX9Q9Y5X1 RNU6-209P-201ENST00000384118 107 ntBASIC1.41□□□□□ -2.18
SNX9Q9Y5X1 RNU6-804P-201ENST00000384286 107 ntBASIC1.41□□□□□ -2.18
SNX9Q9Y5X1 RNU6-768P-201ENST00000384683 107 ntBASIC1.41□□□□□ -2.18
SNX9Q9Y5X1 MIR136-201ENST00000385207 82 ntBASIC1.41□□□□□ -2.18
SNX9Q9Y5X1 SNORD41-201ENST00000386967 70 ntBASIC1.41□□□□□ -2.18
SNX9Q9Y5X1 MIR802-201ENST00000390235 94 ntBASIC1.41□□□□□ -2.18
SNX9Q9Y5X1 AC027119.1-201ENST00000440877 241 ntBASIC1.41□□□□□ -2.18
SNX9Q9Y5X1 AC004223.1-201ENST00000479840 271 ntBASIC1.41□□□□□ -2.18
SNX9Q9Y5X1 AC079140.2-201ENST00000506193 142 ntBASIC1.41□□□□□ -2.18
SNX9Q9Y5X1 RNU6-255P-201ENST00000516957 105 ntBASIC1.41□□□□□ -2.18
SNX9Q9Y5X1 RNU6-1270P-201ENST00000517128 108 ntBASIC1.41□□□□□ -2.18
SNX9Q9Y5X1 FAM106DP-201ENST00000586416 501 ntBASIC1.41□□□□□ -2.18
SNX9Q9Y5X1 AL365434.2-201ENST00000607979 234 ntBASIC1.41□□□□□ -2.18
SNX9Q9Y5X1 AC104465.1-201ENST00000611365 139 ntBASIC1.41□□□□□ -2.18
SNX9Q9Y5X1 AL353770.2-201ENST00000620024 78 ntBASIC1.41□□□□□ -2.18
SNX9Q9Y5X1 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC1.41□□□□□ -2.18
SNX9Q9Y5X1 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.41□□□□□ -2.18
SNX9Q9Y5X1 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.41□□□□□ -2.18
SNX9Q9Y5X1 RNU6-1130P-201ENST00000365434 107 ntBASIC1.4□□□□□ -2.19
SNX9Q9Y5X1 Y_RNA.357-201ENST00000365487 109 ntBASIC1.4□□□□□ -2.19
SNX9Q9Y5X1 SNORD38C-201ENST00000384381 69 ntBASIC1.4□□□□□ -2.19
SNX9Q9Y5X1 SNORD77.3-201ENST00000391113 65 ntBASIC1.4□□□□□ -2.19
SNX9Q9Y5X1 SNORA79-201ENST00000408376 140 ntBASIC1.4□□□□□ -2.19
SNX9Q9Y5X1 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.4□□□□□ -2.19
SNX9Q9Y5X1 AC107027.2-201ENST00000512197 115 ntBASIC1.4□□□□□ -2.19
SNX9Q9Y5X1 SNORD116-25-201ENST00000516517 92 ntBASIC1.4□□□□□ -2.19
SNX9Q9Y5X1 AL365205.2-201ENST00000594586 68 ntBASIC1.4□□□□□ -2.19
SNX9Q9Y5X1 AL513534.2-201ENST00000603836 250 ntBASIC1.4□□□□□ -2.19
SNX9Q9Y5X1 AC021753.1-201ENST00000635724 168 ntBASIC1.4□□□□□ -2.19
SNX9Q9Y5X1 MIR376A2-201ENST00000636782 80 ntBASIC1.4□□□□□ -2.19
SNX9Q9Y5X1 Y_RNA.37-201ENST00000362606 108 ntBASIC1.39□□□□□ -2.19
SNX9Q9Y5X1 SNORD115-28-201ENST00000363931 81 ntBASIC1.39□□□□□ -2.19
SNX9Q9Y5X1 Y_RNA.337-201ENST00000365312 102 ntBASIC1.39□□□□□ -2.19
SNX9Q9Y5X1 RNU6-1336P-201ENST00000383886 109 ntBASIC1.39□□□□□ -2.19
SNX9Q9Y5X1 Y_RNA.393-201ENST00000383936 102 ntBASIC1.39□□□□□ -2.19
SNX9Q9Y5X1 Y_RNA.494-201ENST00000384432 111 ntBASIC1.39□□□□□ -2.19
SNX9Q9Y5X1 SNORA74.3-201ENST00000517108 154 ntBASIC1.39□□□□□ -2.19
SNX9Q9Y5X1 MTND5P41-201ENST00000517498 206 ntBASIC1.39□□□□□ -2.19
SNX9Q9Y5X1 MIR548AR-201ENST00000582191 57 ntBASIC1.39□□□□□ -2.19
SNX9Q9Y5X1 AL359821.1-201ENST00000605519 182 ntBASIC1.39□□□□□ -2.19
SNX9Q9Y5X1 MIR3658-201ENST00000636291 56 ntBASIC1.39□□□□□ -2.19
SNX9Q9Y5X1 RNY1P11-201ENST00000363759 113 ntBASIC1.38□□□□□ -2.19
SNX9Q9Y5X1 RNU6-1082P-201ENST00000364574 107 ntBASIC1.38□□□□□ -2.19
SNX9Q9Y5X1 MIR758-201ENST00000390227 88 ntBASIC1.38□□□□□ -2.19
SNX9Q9Y5X1 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
SNX9Q9Y5X1 SNORA40.6-201ENST00000391153 128 ntBASIC1.38□□□□□ -2.19
SNX9Q9Y5X1 U8.17-201ENST00000391292 132 ntBASIC1.38□□□□□ -2.19
SNX9Q9Y5X1 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.38□□□□□ -2.19
SNX9Q9Y5X1 SNORD123-201ENST00000459473 70 ntBASIC1.38□□□□□ -2.19
SNX9Q9Y5X1 RNU2-13P-201ENST00000515909 113 ntBASIC1.38□□□□□ -2.19
SNX9Q9Y5X1 MIR3660-201ENST00000584845 100 ntBASIC1.38□□□□□ -2.19
SNX9Q9Y5X1 AC015726.2-201ENST00000620112 122 ntBASIC1.38□□□□□ -2.19
SNX9Q9Y5X1 RNU6-1292P-201ENST00000383856 107 ntBASIC1.37□□□□□ -2.19
SNX9Q9Y5X1 Y_RNA.398-201ENST00000383952 99 ntBASIC1.37□□□□□ -2.19
SNX9Q9Y5X1 Y_RNA.542-201ENST00000384641 111 ntBASIC1.37□□□□□ -2.19
SNX9Q9Y5X1 SNORD28B-201ENST00000390993 75 ntBASIC1.37□□□□□ -2.19
SNX9Q9Y5X1 RPS27P16-201ENST00000425758 201 ntBASIC1.37□□□□□ -2.19
SNX9Q9Y5X1 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.37□□□□□ -2.19
SNX9Q9Y5X1 SNORD36C-201ENST00000516733 66 ntBASIC1.37□□□□□ -2.19
SNX9Q9Y5X1 RNU6-922P-201ENST00000516753 99 ntBASIC1.37□□□□□ -2.19
SNX9Q9Y5X1 SNORA18.7-201ENST00000516910 131 ntBASIC1.37□□□□□ -2.19
SNX9Q9Y5X1 RNU7-181P-201ENST00000517234 74 ntBASIC1.37□□□□□ -2.19
SNX9Q9Y5X1 MIR3937-201ENST00000580135 106 ntBASIC1.37□□□□□ -2.19
SNX9Q9Y5X1 MIR3129-201ENST00000581095 76 ntBASIC1.37□□□□□ -2.19
SNX9Q9Y5X1 AC134878.1-201ENST00000619901 243 ntBASIC1.37□□□□□ -2.19
SNX9Q9Y5X1 Y_RNA.170-201ENST00000363746 110 ntBASIC1.36□□□□□ -2.19
SNX9Q9Y5X1 Y_RNA.327-201ENST00000365201 102 ntBASIC1.36□□□□□ -2.19
SNX9Q9Y5X1 RNU6-1065P-201ENST00000384513 106 ntBASIC1.36□□□□□ -2.19
SNX9Q9Y5X1 Y_RNA.521-201ENST00000384560 114 ntBASIC1.36□□□□□ -2.19
SNX9Q9Y5X1 RNU6-321P-201ENST00000410912 106 ntBASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 189.5 ms