Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 AC074085.1-201ENST00000413598 418 ntBASIC-0.96□□□□□ -2.56
VPS29Q9UBQ0 AF228730.4-201ENST00000421457 183 ntBASIC-0.96□□□□□ -2.56
VPS29Q9UBQ0 RNU6-1281P-201ENST00000516223 105 ntBASIC-0.96□□□□□ -2.56
VPS29Q9UBQ0 MIR5589-201ENST00000579442 60 ntBASIC-0.96□□□□□ -2.56
VPS29Q9UBQ0 MIR4436A-201ENST00000585278 85 ntBASIC-0.96□□□□□ -2.56
VPS29Q9UBQ0 AL162413.1-201ENST00000603198 110 ntBASIC-0.96□□□□□ -2.56
VPS29Q9UBQ0 AC245008.1-201ENST00000608123 476 ntBASIC-0.96□□□□□ -2.56
VPS29Q9UBQ0 Y_RNA.49-201ENST00000362714 112 ntBASIC-0.97□□□□□ -2.56
VPS29Q9UBQ0 Y_RNA.170-201ENST00000363746 110 ntBASIC-0.97□□□□□ -2.56
VPS29Q9UBQ0 RNA5SP245-201ENST00000364239 121 ntBASIC-0.97□□□□□ -2.56
VPS29Q9UBQ0 Y_RNA.251-201ENST00000364551 99 ntBASIC-0.97□□□□□ -2.56
VPS29Q9UBQ0 U8.6-201ENST00000364939 135 ntBASIC-0.97□□□□□ -2.56
VPS29Q9UBQ0 RNU6-938P-201ENST00000411285 103 ntBASIC-0.97□□□□□ -2.56
VPS29Q9UBQ0 AC124312.5-201ENST00000604451 268 ntBASIC-0.97□□□□□ -2.56
VPS29Q9UBQ0 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.97□□□□□ -2.56
VPS29Q9UBQ0 Y_RNA.30-201ENST00000362572 97 ntBASIC-0.98□□□□□ -2.57
VPS29Q9UBQ0 RNU6-626P-201ENST00000363354 107 ntBASIC-0.98□□□□□ -2.57
VPS29Q9UBQ0 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.98□□□□□ -2.57
VPS29Q9UBQ0 SNORD77.3-201ENST00000391113 65 ntBASIC-0.98□□□□□ -2.57
VPS29Q9UBQ0 RNU6-332P-201ENST00000391193 108 ntBASIC-0.98□□□□□ -2.57
VPS29Q9UBQ0 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-0.98□□□□□ -2.57
VPS29Q9UBQ0 RNU6-864P-201ENST00000516256 108 ntBASIC-0.98□□□□□ -2.57
VPS29Q9UBQ0 AC022441.3-201ENST00000605737 136 ntBASIC-0.98□□□□□ -2.57
VPS29Q9UBQ0 AL359880.1-201ENST00000621879 266 ntBASIC-0.98□□□□□ -2.57
VPS29Q9UBQ0 AC073869.9-201ENST00000641610 120 ntBASIC-0.98□□□□□ -2.57
VPS29Q9UBQ0 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.99□□□□□ -2.57
VPS29Q9UBQ0 Y_RNA.2-201ENST00000362330 96 ntBASIC-0.99□□□□□ -2.57
VPS29Q9UBQ0 SNORD114-14-201ENST00000362723 75 ntBASIC-0.99□□□□□ -2.57
VPS29Q9UBQ0 Y_RNA.552-201ENST00000384665 112 ntBASIC-0.99□□□□□ -2.57
VPS29Q9UBQ0 MIR604-201ENST00000384880 94 ntBASIC-0.99□□□□□ -2.57
VPS29Q9UBQ0 RNU6-908P-201ENST00000410160 94 ntBASIC-0.99□□□□□ -2.57
VPS29Q9UBQ0 SNORA36B-201ENST00000410438 131 ntBASIC-0.99□□□□□ -2.57
VPS29Q9UBQ0 MTND4P28-201ENST00000426217 387 ntBASIC-0.99□□□□□ -2.57
VPS29Q9UBQ0 RPL30P15-201ENST00000457129 321 ntBASIC-0.99□□□□□ -2.57
VPS29Q9UBQ0 MTND3P12-201ENST00000559068 328 ntBASIC-0.99□□□□□ -2.57
VPS29Q9UBQ0 NBR2-204ENST00000587322 63 ntBASIC-0.99□□□□□ -2.57
VPS29Q9UBQ0 AC093424.1-201ENST00000604999 338 ntBASIC-0.99□□□□□ -2.57
VPS29Q9UBQ0 MIR1244-1-201ENST00000612829 85 ntBASIC-0.99□□□□□ -2.57
VPS29Q9UBQ0 MIR1244-3-201ENST00000635744 85 ntBASIC-0.99□□□□□ -2.57
VPS29Q9UBQ0 MIR1244-2-201ENST00000636449 85 ntBASIC-0.99□□□□□ -2.57
VPS29Q9UBQ0 MIR1244-4-202ENST00000636813 85 ntBASIC-0.99□□□□□ -2.57
VPS29Q9UBQ0 Y_RNA.473-201ENST00000384333 102 ntBASIC-1□□□□□ -2.57
VPS29Q9UBQ0 MIR224-201ENST00000384889 81 ntBASIC-1□□□□□ -2.57
VPS29Q9UBQ0 MIRLET7F2-201ENST00000385277 83 ntBASIC-1□□□□□ -2.57
VPS29Q9UBQ0 AL022718.1-201ENST00000412004 84 ntBASIC-1□□□□□ -2.57
VPS29Q9UBQ0 AC096949.1-201ENST00000412047 152 ntBASIC-1□□□□□ -2.57
VPS29Q9UBQ0 RNU7-96P-201ENST00000459535 64 ntBASIC-1□□□□□ -2.57
VPS29Q9UBQ0 AC091951.2-201ENST00000500762 203 ntBASIC-1□□□□□ -2.57
VPS29Q9UBQ0 RNU6-1194P-201ENST00000516208 104 ntBASIC-1□□□□□ -2.57
VPS29Q9UBQ0 RNU6-1088P-201ENST00000516850 104 ntBASIC-1□□□□□ -2.57
VPS29Q9UBQ0 Y_RNA.37-201ENST00000362606 108 ntBASIC-1.01□□□□□ -2.57
VPS29Q9UBQ0 RNU6-451P-201ENST00000362921 107 ntBASIC-1.01□□□□□ -2.57
VPS29Q9UBQ0 RNU6-490P-201ENST00000362985 107 ntBASIC-1.01□□□□□ -2.57
VPS29Q9UBQ0 Y_RNA.230-201ENST00000364348 109 ntBASIC-1.01□□□□□ -2.57
VPS29Q9UBQ0 MTND1P2-201ENST00000430604 821 ntBASIC-1.01□□□□□ -2.57
VPS29Q9UBQ0 SNORA25.16-201ENST00000516741 121 ntBASIC-1.01□□□□□ -2.57
VPS29Q9UBQ0 RNU6-566P-201ENST00000516790 107 ntBASIC-1.01□□□□□ -2.57
VPS29Q9UBQ0 RNA5SP66-201ENST00000517178 101 ntBASIC-1.01□□□□□ -2.57
VPS29Q9UBQ0 MTND5P32-201ENST00000560711 1802 ntBASIC-1.01□□□□□ -2.57
VPS29Q9UBQ0 RNU4-73P-201ENST00000363164 141 ntBASIC-1.02□□□□□ -2.57
VPS29Q9UBQ0 SNORA63.5-201ENST00000363548 123 ntBASIC-1.02□□□□□ -2.57
VPS29Q9UBQ0 RNU6-1144P-201ENST00000384247 104 ntBASIC-1.02□□□□□ -2.57
VPS29Q9UBQ0 MIR516B1-201ENST00000385211 90 ntBASIC-1.02□□□□□ -2.57
VPS29Q9UBQ0 SNORD115-47-201ENST00000391226 86 ntBASIC-1.02□□□□□ -2.57
VPS29Q9UBQ0 AC024067.1-201ENST00000426199 223 ntBASIC-1.02□□□□□ -2.57
VPS29Q9UBQ0 BX276092.1-201ENST00000427368 251 ntBASIC-1.02□□□□□ -2.57
VPS29Q9UBQ0 MIR2053-201ENST00000459295 91 ntBASIC-1.02□□□□□ -2.57
VPS29Q9UBQ0 RN7SKP295-201ENST00000517264 153 ntBASIC-1.02□□□□□ -2.57
VPS29Q9UBQ0 AC141846.1-201ENST00000568348 142 ntBASIC-1.02□□□□□ -2.57
VPS29Q9UBQ0 DLEU2_1.1-201ENST00000612089 120 ntBASIC-1.02□□□□□ -2.57
VPS29Q9UBQ0 DLEU2_1.2-201ENST00000614667 120 ntBASIC-1.02□□□□□ -2.57
VPS29Q9UBQ0 Y_RNA.7-201ENST00000362352 102 ntBASIC-1.03□□□□□ -2.57
VPS29Q9UBQ0 RNU6-653P-201ENST00000363074 106 ntBASIC-1.03□□□□□ -2.57
VPS29Q9UBQ0 SNORD110-201ENST00000408189 75 ntBASIC-1.03□□□□□ -2.57
VPS29Q9UBQ0 MTATP6P17-201ENST00000431030 672 ntBASIC-1.03□□□□□ -2.57
VPS29Q9UBQ0 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC-1.03□□□□□ -2.57
VPS29Q9UBQ0 AC023449.1-201ENST00000454464 154 ntBASIC-1.03□□□□□ -2.57
VPS29Q9UBQ0 RNU6-998P-201ENST00000515894 101 ntBASIC-1.03□□□□□ -2.57
VPS29Q9UBQ0 SNORD36C-201ENST00000516733 66 ntBASIC-1.03□□□□□ -2.57
VPS29Q9UBQ0 AC122108.2-201ENST00000611946 526 ntBASIC-1.03□□□□□ -2.57
VPS29Q9UBQ0 MIR6717-201ENST00000622747 73 ntBASIC-1.03□□□□□ -2.57
VPS29Q9UBQ0 AC022140.2-201ENST00000623500 188 ntBASIC-1.03□□□□□ -2.57
VPS29Q9UBQ0 RNY3P3-201ENST00000363816 102 ntBASIC-1.04□□□□□ -2.58
VPS29Q9UBQ0 RNU6-483P-201ENST00000384088 108 ntBASIC-1.04□□□□□ -2.58
VPS29Q9UBQ0 RNU6-1013P-201ENST00000384180 107 ntBASIC-1.04□□□□□ -2.58
VPS29Q9UBQ0 SNORD78.2-201ENST00000391076 69 ntBASIC-1.04□□□□□ -2.58
VPS29Q9UBQ0 Y_RNA.594-201ENST00000410373 140 ntBASIC-1.04□□□□□ -2.58
VPS29Q9UBQ0 RNU4-63P-201ENST00000411313 118 ntBASIC-1.04□□□□□ -2.58
VPS29Q9UBQ0 AC006210.1-201ENST00000424882 111 ntBASIC-1.04□□□□□ -2.58
VPS29Q9UBQ0 RNU6-1016P-201ENST00000516689 94 ntBASIC-1.04□□□□□ -2.58
VPS29Q9UBQ0 RNU7-149P-201ENST00000516739 59 ntBASIC-1.04□□□□□ -2.58
VPS29Q9UBQ0 Y_RNA.704-201ENST00000516851 102 ntBASIC-1.04□□□□□ -2.58
VPS29Q9UBQ0 RNA5SP169-201ENST00000517268 117 ntBASIC-1.04□□□□□ -2.58
VPS29Q9UBQ0 AC005357.1-201ENST00000588399 301 ntBASIC-1.04□□□□□ -2.58
VPS29Q9UBQ0 DEFB117-201ENST00000602356 141 ntBASIC-1.04□□□□□ -2.58
VPS29Q9UBQ0 AC092794.2-201ENST00000620933 563 ntBASIC-1.04□□□□□ -2.58
VPS29Q9UBQ0 RNU6-597P-201ENST00000365620 102 ntBASIC-1.05□□□□□ -2.58
VPS29Q9UBQ0 RNU6-1162P-201ENST00000384443 104 ntBASIC-1.05□□□□□ -2.58
VPS29Q9UBQ0 SNORA26.6-201ENST00000391256 115 ntBASIC-1.05□□□□□ -2.58
VPS29Q9UBQ0 Y_RNA.681-201ENST00000516445 113 ntBASIC-1.05□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 1565.4 ms