Protein–RNA interactions for Protein: Q9H9Y2

RPF1, Ribosome production factor 1, humanhuman

Known RBP Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1Q9H9Y2 RNA5SP95-201ENST00000410319 137 ntBASIC0.87□□□□□ -2.27
RPF1Q9H9Y2 RNU6-351P-201ENST00000516097 100 ntBASIC0.87□□□□□ -2.27
RPF1Q9H9Y2 AC109810.1-201ENST00000534066 224 ntBASIC0.87□□□□□ -2.27
RPF1Q9H9Y2 MIR5000-201ENST00000577717 103 ntBASIC0.87□□□□□ -2.27
RPF1Q9H9Y2 AC108706.1-201ENST00000611053 297 ntBASIC0.87□□□□□ -2.27
RPF1Q9H9Y2 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.87□□□□□ -2.27
RPF1Q9H9Y2 MIR335-201ENST00000362173 94 ntBASIC0.86□□□□□ -2.27
RPF1Q9H9Y2 Y_RNA.82-201ENST00000363000 102 ntBASIC0.86□□□□□ -2.27
RPF1Q9H9Y2 Y_RNA.92-201ENST00000363043 102 ntBASIC0.86□□□□□ -2.27
RPF1Q9H9Y2 Y_RNA.235-201ENST00000364412 102 ntBASIC0.86□□□□□ -2.27
RPF1Q9H9Y2 Y_RNA.306-201ENST00000365015 102 ntBASIC0.86□□□□□ -2.27
RPF1Q9H9Y2 Y_RNA.312-201ENST00000365089 102 ntBASIC0.86□□□□□ -2.27
RPF1Q9H9Y2 Y_RNA.322-201ENST00000365151 102 ntBASIC0.86□□□□□ -2.27
RPF1Q9H9Y2 Y_RNA.354-201ENST00000365448 111 ntBASIC0.86□□□□□ -2.27
RPF1Q9H9Y2 Y_RNA.396-201ENST00000383949 103 ntBASIC0.86□□□□□ -2.27
RPF1Q9H9Y2 SNORA51.10-201ENST00000384418 136 ntBASIC0.86□□□□□ -2.27
RPF1Q9H9Y2 Y_RNA.518-201ENST00000384552 113 ntBASIC0.86□□□□□ -2.27
RPF1Q9H9Y2 MIR548A2-201ENST00000384956 97 ntBASIC0.86□□□□□ -2.27
RPF1Q9H9Y2 MT-TT-201ENST00000387460 66 ntBASIC0.86□□□□□ -2.27
RPF1Q9H9Y2 MIR1302-6-201ENST00000408466 90 ntBASIC0.86□□□□□ -2.27
RPF1Q9H9Y2 Y_RNA.650-201ENST00000459002 102 ntBASIC0.86□□□□□ -2.27
RPF1Q9H9Y2 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.86□□□□□ -2.27
RPF1Q9H9Y2 Y_RNA.777-201ENST00000516982 102 ntBASIC0.86□□□□□ -2.27
RPF1Q9H9Y2 AC036111.3-201ENST00000526389 112 ntBASIC0.86□□□□□ -2.27
RPF1Q9H9Y2 AL117187.1-201ENST00000555482 181 ntBASIC0.86□□□□□ -2.27
RPF1Q9H9Y2 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.86□□□□□ -2.27
RPF1Q9H9Y2 MIR4643-201ENST00000577473 78 ntBASIC0.86□□□□□ -2.27
RPF1Q9H9Y2 MIR5688-201ENST00000580619 83 ntBASIC0.86□□□□□ -2.27
RPF1Q9H9Y2 AC012433.1-201ENST00000588916 398 ntBASIC0.86□□□□□ -2.27
RPF1Q9H9Y2 Y_RNA.771-201ENST00000598668 102 ntBASIC0.86□□□□□ -2.27
RPF1Q9H9Y2 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.86□□□□□ -2.27
RPF1Q9H9Y2 Y_RNA.789-201ENST00000622480 102 ntBASIC0.86□□□□□ -2.27
RPF1Q9H9Y2 Y_RNA.145-201ENST00000363527 102 ntBASIC0.85□□□□□ -2.27
RPF1Q9H9Y2 snoU2_19.4-201ENST00000364329 80 ntBASIC0.85□□□□□ -2.27
RPF1Q9H9Y2 SNORA1.2-201ENST00000365189 134 ntBASIC0.85□□□□□ -2.27
RPF1Q9H9Y2 RNU6-1011P-201ENST00000384668 107 ntBASIC0.85□□□□□ -2.27
RPF1Q9H9Y2 MIR518F-201ENST00000384973 87 ntBASIC0.85□□□□□ -2.27
RPF1Q9H9Y2 MIR613-201ENST00000385248 95 ntBASIC0.85□□□□□ -2.27
RPF1Q9H9Y2 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.85□□□□□ -2.27
RPF1Q9H9Y2 RNU6-938P-201ENST00000411285 103 ntBASIC0.85□□□□□ -2.27
RPF1Q9H9Y2 RNU2-64P-201ENST00000411315 191 ntBASIC0.85□□□□□ -2.27
RPF1Q9H9Y2 AC004941.2-201ENST00000427009 228 ntBASIC0.85□□□□□ -2.27
RPF1Q9H9Y2 SCARNA8-201ENST00000515924 131 ntBASIC0.85□□□□□ -2.27
RPF1Q9H9Y2 RNU11-2P-201ENST00000516898 142 ntBASIC0.85□□□□□ -2.27
RPF1Q9H9Y2 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.85□□□□□ -2.27
RPF1Q9H9Y2 RNU6-94P-201ENST00000607728 107 ntBASIC0.85□□□□□ -2.27
RPF1Q9H9Y2 AC243994.1-201ENST00000618627 109 ntBASIC0.85□□□□□ -2.27
RPF1Q9H9Y2 RNU6-1335P-201ENST00000365426 107 ntBASIC0.84□□□□□ -2.27
RPF1Q9H9Y2 SNORD61-201ENST00000384252 73 ntBASIC0.84□□□□□ -2.27
RPF1Q9H9Y2 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.84□□□□□ -2.27
RPF1Q9H9Y2 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.84□□□□□ -2.27
RPF1Q9H9Y2 RNU6-847P-201ENST00000411115 108 ntBASIC0.84□□□□□ -2.27
RPF1Q9H9Y2 RNU6-453P-201ENST00000516819 85 ntBASIC0.84□□□□□ -2.27
RPF1Q9H9Y2 AL442663.2-201ENST00000554385 511 ntBASIC0.84□□□□□ -2.27
RPF1Q9H9Y2 MIR4662B-201ENST00000579498 81 ntBASIC0.84□□□□□ -2.27
RPF1Q9H9Y2 MIR6866-201ENST00000638146 69 ntBASIC0.84□□□□□ -2.27
RPF1Q9H9Y2 RNU6-1067P-201ENST00000384752 107 ntBASIC0.83□□□□□ -2.28
RPF1Q9H9Y2 MIR608-201ENST00000384820 100 ntBASIC0.83□□□□□ -2.28
RPF1Q9H9Y2 RPS3AP1-201ENST00000413190 320 ntBASIC0.83□□□□□ -2.28
RPF1Q9H9Y2 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.83□□□□□ -2.28
RPF1Q9H9Y2 RNU6-693P-201ENST00000516134 107 ntBASIC0.83□□□□□ -2.28
RPF1Q9H9Y2 RNU6-197P-201ENST00000516680 100 ntBASIC0.83□□□□□ -2.28
RPF1Q9H9Y2 MIR4282-201ENST00000583613 67 ntBASIC0.83□□□□□ -2.28
RPF1Q9H9Y2 AC013244.2-201ENST00000603396 103 ntBASIC0.83□□□□□ -2.28
RPF1Q9H9Y2 AC106800.4-201ENST00000614905 153 ntBASIC0.83□□□□□ -2.28
RPF1Q9H9Y2 Y_RNA.47-201ENST00000362697 108 ntBASIC0.82□□□□□ -2.28
RPF1Q9H9Y2 Y_RNA.91-201ENST00000363042 107 ntBASIC0.82□□□□□ -2.28
RPF1Q9H9Y2 Y_RNA.176-201ENST00000363815 109 ntBASIC0.82□□□□□ -2.28
RPF1Q9H9Y2 SNORD115-28-201ENST00000363931 81 ntBASIC0.82□□□□□ -2.28
RPF1Q9H9Y2 Y_RNA.241-201ENST00000364470 117 ntBASIC0.82□□□□□ -2.28
RPF1Q9H9Y2 RNU6-484P-201ENST00000384016 107 ntBASIC0.82□□□□□ -2.28
RPF1Q9H9Y2 Y_RNA.459-201ENST00000384251 102 ntBASIC0.82□□□□□ -2.28
RPF1Q9H9Y2 MIR598-201ENST00000384868 97 ntBASIC0.82□□□□□ -2.28
RPF1Q9H9Y2 Y_RNA.590-201ENST00000410140 107 ntBASIC0.82□□□□□ -2.28
RPF1Q9H9Y2 RNU6-613P-201ENST00000410412 108 ntBASIC0.82□□□□□ -2.28
RPF1Q9H9Y2 AL358176.2-201ENST00000425769 204 ntBASIC0.82□□□□□ -2.28
RPF1Q9H9Y2 FABP5P4-201ENST00000437203 171 ntBASIC0.82□□□□□ -2.28
RPF1Q9H9Y2 RNA5SP255-201ENST00000516370 107 ntBASIC0.82□□□□□ -2.28
RPF1Q9H9Y2 RNU6-1270P-201ENST00000517128 108 ntBASIC0.82□□□□□ -2.28
RPF1Q9H9Y2 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.82□□□□□ -2.28
RPF1Q9H9Y2 AL360085.1-201ENST00000604713 532 ntBASIC0.82□□□□□ -2.28
RPF1Q9H9Y2 Y_RNA.37-201ENST00000362606 108 ntBASIC0.81□□□□□ -2.28
RPF1Q9H9Y2 Y_RNA.66-201ENST00000362862 102 ntBASIC0.81□□□□□ -2.28
RPF1Q9H9Y2 SNORA24-201ENST00000384096 131 ntBASIC0.81□□□□□ -2.28
RPF1Q9H9Y2 MIR605-201ENST00000385078 83 ntBASIC0.81□□□□□ -2.28
RPF1Q9H9Y2 AC090844.1-201ENST00000422019 156 ntBASIC0.81□□□□□ -2.28
RPF1Q9H9Y2 AL035398.1-201ENST00000430869 322 ntBASIC0.81□□□□□ -2.28
RPF1Q9H9Y2 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.81□□□□□ -2.28
RPF1Q9H9Y2 SNRPGP8-201ENST00000454064 226 ntBASIC0.81□□□□□ -2.28
RPF1Q9H9Y2 PSMC1P5-201ENST00000512850 177 ntBASIC0.81□□□□□ -2.28
RPF1Q9H9Y2 SNORA18.4-201ENST00000516440 124 ntBASIC0.81□□□□□ -2.28
RPF1Q9H9Y2 RNU6-365P-201ENST00000517113 106 ntBASIC0.81□□□□□ -2.28
RPF1Q9H9Y2 AC133485.1-201ENST00000567176 124 ntBASIC0.81□□□□□ -2.28
RPF1Q9H9Y2 AC138907.6-201ENST00000568401 126 ntBASIC0.81□□□□□ -2.28
RPF1Q9H9Y2 MIR4653-201ENST00000585107 83 ntBASIC0.81□□□□□ -2.28
RPF1Q9H9Y2 AL365265.1-201ENST00000621045 234 ntBASIC0.81□□□□□ -2.28
RPF1Q9H9Y2 MIR6835-201ENST00000621552 64 ntBASIC0.81□□□□□ -2.28
RPF1Q9H9Y2 SNORD115-34-201ENST00000362441 82 ntBASIC0.8□□□□□ -2.28
RPF1Q9H9Y2 SNORD115-12-201ENST00000362583 82 ntBASIC0.8□□□□□ -2.28
RPF1Q9H9Y2 SNORD115-29-201ENST00000362834 82 ntBASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 360.7 ms