Protein–RNA interactions for Protein: Q9H4Z3

PCIF1, Phosphorylated CTD-interacting factor 1, humanhuman

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCIF1Q9H4Z3 snoU13.23-201ENST00000458863 104 ntBASIC2.01□□□□□ -2.09
PCIF1Q9H4Z3 Y_RNA.651-201ENST00000459380 103 ntBASIC2.01□□□□□ -2.09
PCIF1Q9H4Z3 Y_RNA.692-201ENST00000516627 105 ntBASIC2.01□□□□□ -2.09
PCIF1Q9H4Z3 RNU6-1234P-201ENST00000516877 103 ntBASIC2.01□□□□□ -2.09
PCIF1Q9H4Z3 SNORA18.7-201ENST00000516910 131 ntBASIC2.01□□□□□ -2.09
PCIF1Q9H4Z3 AC090821.2-201ENST00000523552 176 ntBASIC2.01□□□□□ -2.09
PCIF1Q9H4Z3 SNORA77B-201ENST00000578179 125 ntBASIC2.01□□□□□ -2.09
PCIF1Q9H4Z3 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.01□□□□□ -2.09
PCIF1Q9H4Z3 MIR3935-201ENST00000583472 104 ntBASIC2.01□□□□□ -2.09
PCIF1Q9H4Z3 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
PCIF1Q9H4Z3 SNORA16.1-201ENST00000364597 132 ntBASIC2□□□□□ -2.09
PCIF1Q9H4Z3 RNA5SP259-201ENST00000365541 109 ntBASIC2□□□□□ -2.09
PCIF1Q9H4Z3 RNU6-1117P-201ENST00000384525 104 ntBASIC2□□□□□ -2.09
PCIF1Q9H4Z3 MIR583-201ENST00000384846 75 ntBASIC2□□□□□ -2.09
PCIF1Q9H4Z3 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2□□□□□ -2.09
PCIF1Q9H4Z3 SNORD28B-201ENST00000390993 75 ntBASIC2□□□□□ -2.09
PCIF1Q9H4Z3 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2□□□□□ -2.09
PCIF1Q9H4Z3 SNORD123-201ENST00000459473 70 ntBASIC2□□□□□ -2.09
PCIF1Q9H4Z3 RNA5SP364-201ENST00000516938 78 ntBASIC2□□□□□ -2.09
PCIF1Q9H4Z3 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2□□□□□ -2.09
PCIF1Q9H4Z3 MIR8074-201ENST00000615081 81 ntBASIC2□□□□□ -2.09
PCIF1Q9H4Z3 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2□□□□□ -2.09
PCIF1Q9H4Z3 SNORD115-34-201ENST00000362441 82 ntBASIC1.99□□□□□ -2.09
PCIF1Q9H4Z3 SNORD115-12-201ENST00000362583 82 ntBASIC1.99□□□□□ -2.09
PCIF1Q9H4Z3 SNORD115-29-201ENST00000362834 82 ntBASIC1.99□□□□□ -2.09
PCIF1Q9H4Z3 Y_RNA.71-201ENST00000362892 104 ntBASIC1.99□□□□□ -2.09
PCIF1Q9H4Z3 SNORD115-9-201ENST00000362912 82 ntBASIC1.99□□□□□ -2.09
PCIF1Q9H4Z3 SNORD115-21-201ENST00000362963 81 ntBASIC1.99□□□□□ -2.09
PCIF1Q9H4Z3 SNORD115-14-201ENST00000363090 81 ntBASIC1.99□□□□□ -2.09
PCIF1Q9H4Z3 SNORD115-13-201ENST00000363358 82 ntBASIC1.99□□□□□ -2.09
PCIF1Q9H4Z3 SNORD115-41-201ENST00000363608 82 ntBASIC1.99□□□□□ -2.09
PCIF1Q9H4Z3 SNORD115-11-201ENST00000363616 82 ntBASIC1.99□□□□□ -2.09
PCIF1Q9H4Z3 SNORD115-5-201ENST00000363633 82 ntBASIC1.99□□□□□ -2.09
PCIF1Q9H4Z3 SNORD115-39-201ENST00000363694 82 ntBASIC1.99□□□□□ -2.09
PCIF1Q9H4Z3 SNORD115-4-201ENST00000363810 82 ntBASIC1.99□□□□□ -2.09
PCIF1Q9H4Z3 SNORD115-16-201ENST00000363887 82 ntBASIC1.99□□□□□ -2.09
PCIF1Q9H4Z3 SNORD115-6-201ENST00000363942 82 ntBASIC1.99□□□□□ -2.09
PCIF1Q9H4Z3 SNORD115-42-201ENST00000364273 82 ntBASIC1.99□□□□□ -2.09
PCIF1Q9H4Z3 SNORD115-15-201ENST00000364809 81 ntBASIC1.99□□□□□ -2.09
PCIF1Q9H4Z3 SNORD115-1-201ENST00000364961 82 ntBASIC1.99□□□□□ -2.09
PCIF1Q9H4Z3 SNORD115-26-201ENST00000365067 82 ntBASIC1.99□□□□□ -2.09
PCIF1Q9H4Z3 SNORD115-10-201ENST00000365073 81 ntBASIC1.99□□□□□ -2.09
PCIF1Q9H4Z3 SNORD115-43-201ENST00000365503 82 ntBASIC1.99□□□□□ -2.09
PCIF1Q9H4Z3 SNORD115-36-201ENST00000365629 82 ntBASIC1.99□□□□□ -2.09
PCIF1Q9H4Z3 RNU4-52P-201ENST00000384209 138 ntBASIC1.99□□□□□ -2.09
PCIF1Q9H4Z3 SNORA27-201ENST00000384323 126 ntBASIC1.99□□□□□ -2.09
PCIF1Q9H4Z3 RNU6-22P-201ENST00000384355 107 ntBASIC1.99□□□□□ -2.09
PCIF1Q9H4Z3 MIR9-3-201ENST00000385084 90 ntBASIC1.99□□□□□ -2.09
PCIF1Q9H4Z3 U8.13-201ENST00000390842 128 ntBASIC1.99□□□□□ -2.09
PCIF1Q9H4Z3 SNORA40.5-201ENST00000391061 128 ntBASIC1.99□□□□□ -2.09
PCIF1Q9H4Z3 RNA5SP489-201ENST00000410986 109 ntBASIC1.99□□□□□ -2.09
PCIF1Q9H4Z3 MTATP6P21-201ENST00000440681 189 ntBASIC1.99□□□□□ -2.09
PCIF1Q9H4Z3 RPS26P48-201ENST00000491713 339 ntBASIC1.99□□□□□ -2.09
PCIF1Q9H4Z3 RNU5E-3P-201ENST00000515913 68 ntBASIC1.99□□□□□ -2.09
PCIF1Q9H4Z3 AC015688.6-201ENST00000577737 104 ntBASIC1.99□□□□□ -2.09
PCIF1Q9H4Z3 Y_RNA.757-201ENST00000578934 114 ntBASIC1.99□□□□□ -2.09
PCIF1Q9H4Z3 MIR3121-201ENST00000579680 77 ntBASIC1.99□□□□□ -2.09
PCIF1Q9H4Z3 AL022345.2-201ENST00000606307 135 ntBASIC1.99□□□□□ -2.09
PCIF1Q9H4Z3 SNORD115-40-201ENST00000606510 82 ntBASIC1.99□□□□□ -2.09
PCIF1Q9H4Z3 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.99□□□□□ -2.09
PCIF1Q9H4Z3 AL365222.1-201ENST00000614661 98 ntBASIC1.99□□□□□ -2.09
PCIF1Q9H4Z3 SUMO2P12-201ENST00000405924 140 ntBASIC1.98□□□□□ -2.09
PCIF1Q9H4Z3 HMGN2P23-201ENST00000456759 269 ntBASIC1.98□□□□□ -2.09
PCIF1Q9H4Z3 AC005908.1-201ENST00000468701 347 ntBASIC1.98□□□□□ -2.09
PCIF1Q9H4Z3 RPL23AP42-201ENST00000471152 471 ntBASIC1.98□□□□□ -2.09
PCIF1Q9H4Z3 RNA5SP182-201ENST00000516064 82 ntBASIC1.98□□□□□ -2.09
PCIF1Q9H4Z3 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.98□□□□□ -2.09
PCIF1Q9H4Z3 AL627230.6-201ENST00000611129 280 ntBASIC1.98□□□□□ -2.09
PCIF1Q9H4Z3 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC1.98□□□□□ -2.09
PCIF1Q9H4Z3 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
PCIF1Q9H4Z3 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.97□□□□□ -2.09
PCIF1Q9H4Z3 RNU6-235P-201ENST00000362644 107 ntBASIC1.97□□□□□ -2.09
PCIF1Q9H4Z3 Y_RNA.114-201ENST00000363265 113 ntBASIC1.97□□□□□ -2.09
PCIF1Q9H4Z3 MIR653-201ENST00000385279 96 ntBASIC1.97□□□□□ -2.09
PCIF1Q9H4Z3 AL627390.1-201ENST00000396055 340 ntBASIC1.97□□□□□ -2.09
PCIF1Q9H4Z3 MIR548I2-201ENST00000408348 149 ntBASIC1.97□□□□□ -2.09
PCIF1Q9H4Z3 RNA5SP233-201ENST00000459153 113 ntBASIC1.97□□□□□ -2.09
PCIF1Q9H4Z3 RPS27P21-201ENST00000486977 252 ntBASIC1.97□□□□□ -2.09
PCIF1Q9H4Z3 MIR4419B-201ENST00000577260 68 ntBASIC1.97□□□□□ -2.09
PCIF1Q9H4Z3 MIR548AR-201ENST00000582191 57 ntBASIC1.97□□□□□ -2.09
PCIF1Q9H4Z3 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.97□□□□□ -2.09
PCIF1Q9H4Z3 MIR6845-201ENST00000613182 61 ntBASIC1.97□□□□□ -2.09
PCIF1Q9H4Z3 SNORA1.2-201ENST00000365189 134 ntBASIC1.96□□□□□ -2.1
PCIF1Q9H4Z3 Y_RNA.351-201ENST00000365436 96 ntBASIC1.96□□□□□ -2.1
PCIF1Q9H4Z3 SNORD116-14-201ENST00000383894 92 ntBASIC1.96□□□□□ -2.1
PCIF1Q9H4Z3 SNORD116-17-201ENST00000383929 92 ntBASIC1.96□□□□□ -2.1
PCIF1Q9H4Z3 RNU6-80P-201ENST00000384195 107 ntBASIC1.96□□□□□ -2.1
PCIF1Q9H4Z3 SNORD116-15-201ENST00000384445 92 ntBASIC1.96□□□□□ -2.1
PCIF1Q9H4Z3 SNORD116-19-201ENST00000384729 92 ntBASIC1.96□□□□□ -2.1
PCIF1Q9H4Z3 RNU7-107P-201ENST00000459121 61 ntBASIC1.96□□□□□ -2.1
PCIF1Q9H4Z3 RPS29P24-201ENST00000486345 171 ntBASIC1.96□□□□□ -2.1
PCIF1Q9H4Z3 SNORA74.3-201ENST00000517108 154 ntBASIC1.96□□□□□ -2.1
PCIF1Q9H4Z3 AC090049.2-201ENST00000550377 109 ntBASIC1.96□□□□□ -2.1
PCIF1Q9H4Z3 AC108081.1-201ENST00000604358 221 ntBASIC1.96□□□□□ -2.1
PCIF1Q9H4Z3 MIR8081-201ENST00000611533 95 ntBASIC1.96□□□□□ -2.1
PCIF1Q9H4Z3 AC091932.4-201ENST00000623386 200 ntBASIC1.96□□□□□ -2.1
PCIF1Q9H4Z3 AL359851.1-201ENST00000569460 4997 ntBASIC1.96□□□□□ -2.1
PCIF1Q9H4Z3 Y_RNA.127-201ENST00000363386 109 ntBASIC1.95□□□□□ -2.1
PCIF1Q9H4Z3 Y_RNA.261-201ENST00000364631 102 ntBASIC1.95□□□□□ -2.1
PCIF1Q9H4Z3 Y_RNA.370-201ENST00000365589 108 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms