Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.36□□□□□ -2.35
RPAP1Q9BWH6 RAC1P9-201ENST00000604990 392 ntBASIC0.36□□□□□ -2.35
RPAP1Q9BWH6 uc_338.4-201ENST00000616635 176 ntBASIC0.36□□□□□ -2.35
RPAP1Q9BWH6 AL138825.1-201ENST00000618587 192 ntBASIC0.36□□□□□ -2.35
RPAP1Q9BWH6 Y_RNA.136-201ENST00000363444 102 ntBASIC0.35□□□□□ -2.35
RPAP1Q9BWH6 RNU6-450P-201ENST00000364654 107 ntBASIC0.35□□□□□ -2.35
RPAP1Q9BWH6 Y_RNA.394-201ENST00000383942 103 ntBASIC0.35□□□□□ -2.35
RPAP1Q9BWH6 RNU6-35P-201ENST00000384530 107 ntBASIC0.35□□□□□ -2.35
RPAP1Q9BWH6 Y_RNA.547-201ENST00000384654 119 ntBASIC0.35□□□□□ -2.35
RPAP1Q9BWH6 MIR520H-201ENST00000385126 88 ntBASIC0.35□□□□□ -2.35
RPAP1Q9BWH6 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC0.35□□□□□ -2.35
RPAP1Q9BWH6 RNU6-823P-201ENST00000391042 103 ntBASIC0.35□□□□□ -2.35
RPAP1Q9BWH6 Y_RNA.602-201ENST00000410535 92 ntBASIC0.35□□□□□ -2.35
RPAP1Q9BWH6 SNORD83.1-201ENST00000411362 77 ntBASIC0.35□□□□□ -2.35
RPAP1Q9BWH6 MTCO1P5-201ENST00000433573 344 ntBASIC0.35□□□□□ -2.35
RPAP1Q9BWH6 RNA5SP285-201ENST00000516619 119 ntBASIC0.35□□□□□ -2.35
RPAP1Q9BWH6 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.35□□□□□ -2.35
RPAP1Q9BWH6 AC007751.1-201ENST00000529260 376 ntBASIC0.35□□□□□ -2.35
RPAP1Q9BWH6 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.35□□□□□ -2.35
RPAP1Q9BWH6 AL021707.8-201ENST00000609428 183 ntBASIC0.35□□□□□ -2.35
RPAP1Q9BWH6 Y_RNA.804-201ENST00000615262 101 ntBASIC0.35□□□□□ -2.35
RPAP1Q9BWH6 MIR6718-201ENST00000616153 80 ntBASIC0.35□□□□□ -2.35
RPAP1Q9BWH6 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.35□□□□□ -2.35
RPAP1Q9BWH6 Y_RNA.26-201ENST00000362539 101 ntBASIC0.34□□□□□ -2.35
RPAP1Q9BWH6 Y_RNA.509-201ENST00000384506 99 ntBASIC0.34□□□□□ -2.35
RPAP1Q9BWH6 MIR215-201ENST00000384858 110 ntBASIC0.34□□□□□ -2.35
RPAP1Q9BWH6 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.34□□□□□ -2.35
RPAP1Q9BWH6 AC015818.7-201ENST00000428754 109 ntBASIC0.34□□□□□ -2.35
RPAP1Q9BWH6 AC087499.7-201ENST00000441958 109 ntBASIC0.34□□□□□ -2.35
RPAP1Q9BWH6 Y_RNA.639-201ENST00000458981 102 ntBASIC0.34□□□□□ -2.35
RPAP1Q9BWH6 RNU7-25P-201ENST00000516544 62 ntBASIC0.34□□□□□ -2.35
RPAP1Q9BWH6 C8orf59P2-201ENST00000603441 271 ntBASIC0.34□□□□□ -2.35
RPAP1Q9BWH6 AC124312.5-201ENST00000604451 268 ntBASIC0.34□□□□□ -2.35
RPAP1Q9BWH6 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.34□□□□□ -2.35
RPAP1Q9BWH6 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.34□□□□□ -2.35
RPAP1Q9BWH6 snoU2_19.2-201ENST00000363024 80 ntBASIC0.33□□□□□ -2.36
RPAP1Q9BWH6 Y_RNA.183-201ENST00000363882 113 ntBASIC0.33□□□□□ -2.36
RPAP1Q9BWH6 RNU6-806P-201ENST00000365147 105 ntBASIC0.33□□□□□ -2.36
RPAP1Q9BWH6 RNU6-1248P-201ENST00000391096 64 ntBASIC0.33□□□□□ -2.36
RPAP1Q9BWH6 RNA5SP299-201ENST00000391203 116 ntBASIC0.33□□□□□ -2.36
RPAP1Q9BWH6 RNU6-938P-201ENST00000411285 103 ntBASIC0.33□□□□□ -2.36
RPAP1Q9BWH6 ELOCP20-201ENST00000422460 345 ntBASIC0.33□□□□□ -2.36
RPAP1Q9BWH6 RNU6-1170P-201ENST00000515974 106 ntBASIC0.33□□□□□ -2.36
RPAP1Q9BWH6 Y_RNA.666-201ENST00000516187 112 ntBASIC0.33□□□□□ -2.36
RPAP1Q9BWH6 Y_RNA.713-201ENST00000517013 96 ntBASIC0.33□□□□□ -2.36
RPAP1Q9BWH6 MIR4264-201ENST00000583520 66 ntBASIC0.33□□□□□ -2.36
RPAP1Q9BWH6 uc_338.6-201ENST00000613544 171 ntBASIC0.33□□□□□ -2.36
RPAP1Q9BWH6 MIR376A1-201ENST00000616574 68 ntBASIC0.33□□□□□ -2.36
RPAP1Q9BWH6 MIR18A-201ENST00000362310 71 ntBASIC0.32□□□□□ -2.36
RPAP1Q9BWH6 RNU6-899P-201ENST00000363947 107 ntBASIC0.32□□□□□ -2.36
RPAP1Q9BWH6 Y_RNA.214-201ENST00000364201 112 ntBASIC0.32□□□□□ -2.36
RPAP1Q9BWH6 Y_RNA.424-201ENST00000384063 103 ntBASIC0.32□□□□□ -2.36
RPAP1Q9BWH6 Y_RNA.445-201ENST00000384168 102 ntBASIC0.32□□□□□ -2.36
RPAP1Q9BWH6 Y_RNA.526-201ENST00000384572 110 ntBASIC0.32□□□□□ -2.36
RPAP1Q9BWH6 Y_RNA.541-201ENST00000384640 113 ntBASIC0.32□□□□□ -2.36
RPAP1Q9BWH6 Y_RNA.569-201ENST00000384749 103 ntBASIC0.32□□□□□ -2.36
RPAP1Q9BWH6 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.32□□□□□ -2.36
RPAP1Q9BWH6 MTATP6P23-201ENST00000440153 476 ntBASIC0.32□□□□□ -2.36
RPAP1Q9BWH6 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.32□□□□□ -2.36
RPAP1Q9BWH6 AC107297.1-201ENST00000459991 176 ntBASIC0.32□□□□□ -2.36
RPAP1Q9BWH6 AC091959.1-201ENST00000495857 238 ntBASIC0.32□□□□□ -2.36
RPAP1Q9BWH6 SNORA68.3-201ENST00000515906 83 ntBASIC0.32□□□□□ -2.36
RPAP1Q9BWH6 RNU7-149P-201ENST00000516739 59 ntBASIC0.32□□□□□ -2.36
RPAP1Q9BWH6 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.32□□□□□ -2.36
RPAP1Q9BWH6 MIR4771-2-201ENST00000577758 74 ntBASIC0.32□□□□□ -2.36
RPAP1Q9BWH6 MIR4771-1-201ENST00000582617 74 ntBASIC0.32□□□□□ -2.36
RPAP1Q9BWH6 AL162730.1-201ENST00000605734 292 ntBASIC0.32□□□□□ -2.36
RPAP1Q9BWH6 AC013791.1-201ENST00000616619 62 ntBASIC0.32□□□□□ -2.36
RPAP1Q9BWH6 AC090971.5-201ENST00000621102 293 ntBASIC0.32□□□□□ -2.36
RPAP1Q9BWH6 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.32□□□□□ -2.36
RPAP1Q9BWH6 RNU4-10P-201ENST00000364383 140 ntBASIC0.32□□□□□ -2.36
RPAP1Q9BWH6 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.32□□□□□ -2.36
RPAP1Q9BWH6 SNORA24-201ENST00000384096 131 ntBASIC0.32□□□□□ -2.36
RPAP1Q9BWH6 Y_RNA.486-201ENST00000384398 107 ntBASIC0.32□□□□□ -2.36
RPAP1Q9BWH6 Y_RNA.572-201ENST00000384757 98 ntBASIC0.32□□□□□ -2.36
RPAP1Q9BWH6 RNU6-913P-201ENST00000390913 95 ntBASIC0.32□□□□□ -2.36
RPAP1Q9BWH6 Y_RNA.581-201ENST00000391017 97 ntBASIC0.32□□□□□ -2.36
RPAP1Q9BWH6 MIR1252-201ENST00000408861 65 ntBASIC0.32□□□□□ -2.36
RPAP1Q9BWH6 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.32□□□□□ -2.36
RPAP1Q9BWH6 snoU13.16-201ENST00000459350 104 ntBASIC0.32□□□□□ -2.36
RPAP1Q9BWH6 HAR1A.1-201ENST00000459583 118 ntBASIC0.32□□□□□ -2.36
RPAP1Q9BWH6 MIR3612-201ENST00000579753 87 ntBASIC0.32□□□□□ -2.36
RPAP1Q9BWH6 MIR4804-201ENST00000581683 73 ntBASIC0.32□□□□□ -2.36
RPAP1Q9BWH6 AL049861.1-201ENST00000603130 150 ntBASIC0.32□□□□□ -2.36
RPAP1Q9BWH6 AC020891.4-201ENST00000605745 93 ntBASIC0.32□□□□□ -2.36
RPAP1Q9BWH6 Y_RNA.28-201ENST00000362554 111 ntBASIC0.31□□□□□ -2.36
RPAP1Q9BWH6 RNU6-1205P-201ENST00000363625 106 ntBASIC0.31□□□□□ -2.36
RPAP1Q9BWH6 RNU6-144P-201ENST00000383951 107 ntBASIC0.31□□□□□ -2.36
RPAP1Q9BWH6 RNU6-662P-201ENST00000384253 104 ntBASIC0.31□□□□□ -2.36
RPAP1Q9BWH6 MIR548A2-201ENST00000384956 97 ntBASIC0.31□□□□□ -2.36
RPAP1Q9BWH6 MIR548O-201ENST00000408583 114 ntBASIC0.31□□□□□ -2.36
RPAP1Q9BWH6 RPL21P38-201ENST00000418090 167 ntBASIC0.31□□□□□ -2.36
RPAP1Q9BWH6 BTF3P11-201ENST00000426582 477 ntBASIC0.31□□□□□ -2.36
RPAP1Q9BWH6 RNU7-56P-201ENST00000458744 62 ntBASIC0.31□□□□□ -2.36
RPAP1Q9BWH6 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.31□□□□□ -2.36
RPAP1Q9BWH6 MIR5692C2-201ENST00000577959 77 ntBASIC0.31□□□□□ -2.36
RPAP1Q9BWH6 AL008718.3-201ENST00000610217 321 ntBASIC0.31□□□□□ -2.36
RPAP1Q9BWH6 MIR8055-201ENST00000610739 97 ntBASIC0.31□□□□□ -2.36
RPAP1Q9BWH6 AC090574.1-201ENST00000623186 233 ntBASIC0.31□□□□□ -2.36
RPAP1Q9BWH6 Y_RNA.16-201ENST00000362421 102 ntBASIC0.3□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms