Protein–RNA interactions for Protein: Q9BQ90

KLHDC3, Kelch domain-containing protein 3, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC3Q9BQ90 Y_RNA.673-201ENST00000516306 88 ntBASIC0.5□□□□□ -2.33
KLHDC3Q9BQ90 SNORA27.4-201ENST00000516650 95 ntBASIC0.5□□□□□ -2.33
KLHDC3Q9BQ90 Y_RNA.711-201ENST00000516993 102 ntBASIC0.5□□□□□ -2.33
KLHDC3Q9BQ90 AC011195.1-201ENST00000578177 177 ntBASIC0.5□□□□□ -2.33
KLHDC3Q9BQ90 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.5□□□□□ -2.33
KLHDC3Q9BQ90 Y_RNA.19-201ENST00000362462 99 ntBASIC0.49□□□□□ -2.33
KLHDC3Q9BQ90 SNORD45.3-201ENST00000363836 72 ntBASIC0.49□□□□□ -2.33
KLHDC3Q9BQ90 Y_RNA.214-201ENST00000364201 112 ntBASIC0.49□□□□□ -2.33
KLHDC3Q9BQ90 Y_RNA.241-201ENST00000364470 117 ntBASIC0.49□□□□□ -2.33
KLHDC3Q9BQ90 Y_RNA.269-201ENST00000364685 89 ntBASIC0.49□□□□□ -2.33
KLHDC3Q9BQ90 Y_RNA.394-201ENST00000383942 103 ntBASIC0.49□□□□□ -2.33
KLHDC3Q9BQ90 RNU6-125P-201ENST00000384505 107 ntBASIC0.49□□□□□ -2.33
KLHDC3Q9BQ90 Y_RNA.535-201ENST00000384612 99 ntBASIC0.49□□□□□ -2.33
KLHDC3Q9BQ90 MIR92A1-201ENST00000385233 78 ntBASIC0.49□□□□□ -2.33
KLHDC3Q9BQ90 RPL21P38-201ENST00000418090 167 ntBASIC0.49□□□□□ -2.33
KLHDC3Q9BQ90 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.49□□□□□ -2.33
KLHDC3Q9BQ90 AL157398.1-201ENST00000452981 186 ntBASIC0.49□□□□□ -2.33
KLHDC3Q9BQ90 RNU6-1132P-201ENST00000459214 107 ntBASIC0.49□□□□□ -2.33
KLHDC3Q9BQ90 MTCO2P24-201ENST00000515611 426 ntBASIC0.49□□□□□ -2.33
KLHDC3Q9BQ90 Y_RNA.666-201ENST00000516187 112 ntBASIC0.49□□□□□ -2.33
KLHDC3Q9BQ90 RNY3P15-201ENST00000516297 97 ntBASIC0.49□□□□□ -2.33
KLHDC3Q9BQ90 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.49□□□□□ -2.33
KLHDC3Q9BQ90 AC113195.1-201ENST00000579952 141 ntBASIC0.49□□□□□ -2.33
KLHDC3Q9BQ90 AP000942.4-201ENST00000604811 241 ntBASIC0.49□□□□□ -2.33
KLHDC3Q9BQ90 AC134878.1-201ENST00000619901 243 ntBASIC0.49□□□□□ -2.33
KLHDC3Q9BQ90 Y_RNA.61-201ENST00000362835 102 ntBASIC0.48□□□□□ -2.33
KLHDC3Q9BQ90 SNORD115-28-201ENST00000363931 81 ntBASIC0.48□□□□□ -2.33
KLHDC3Q9BQ90 Y_RNA.210-201ENST00000364161 110 ntBASIC0.48□□□□□ -2.33
KLHDC3Q9BQ90 RNU5E-4P-201ENST00000364931 120 ntBASIC0.48□□□□□ -2.33
KLHDC3Q9BQ90 RNU6-662P-201ENST00000384253 104 ntBASIC0.48□□□□□ -2.33
KLHDC3Q9BQ90 Y_RNA.508-201ENST00000384502 114 ntBASIC0.48□□□□□ -2.33
KLHDC3Q9BQ90 MIR215-201ENST00000384858 110 ntBASIC0.48□□□□□ -2.33
KLHDC3Q9BQ90 Y_RNA.587-201ENST00000391210 103 ntBASIC0.48□□□□□ -2.33
KLHDC3Q9BQ90 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.48□□□□□ -2.33
KLHDC3Q9BQ90 AL008718.3-201ENST00000610217 321 ntBASIC0.48□□□□□ -2.33
KLHDC3Q9BQ90 Y_RNA.802-201ENST00000614892 130 ntBASIC0.48□□□□□ -2.33
KLHDC3Q9BQ90 AC022709.1-201ENST00000615967 87 ntBASIC0.48□□□□□ -2.33
KLHDC3Q9BQ90 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.48□□□□□ -2.33
KLHDC3Q9BQ90 UBE2WP1-201ENST00000362030 340 ntBASIC0.47□□□□□ -2.33
KLHDC3Q9BQ90 RNU6-369P-201ENST00000362515 102 ntBASIC0.47□□□□□ -2.33
KLHDC3Q9BQ90 RNU1-133P-201ENST00000364867 167 ntBASIC0.47□□□□□ -2.33
KLHDC3Q9BQ90 RNU6-867P-201ENST00000364956 107 ntBASIC0.47□□□□□ -2.33
KLHDC3Q9BQ90 Y_RNA.354-201ENST00000365448 111 ntBASIC0.47□□□□□ -2.33
KLHDC3Q9BQ90 Y_RNA.355-201ENST00000365462 98 ntBASIC0.47□□□□□ -2.33
KLHDC3Q9BQ90 Y_RNA.527-201ENST00000384573 102 ntBASIC0.47□□□□□ -2.33
KLHDC3Q9BQ90 RNU6-205P-201ENST00000390858 107 ntBASIC0.47□□□□□ -2.33
KLHDC3Q9BQ90 SNORA40.5-201ENST00000391061 128 ntBASIC0.47□□□□□ -2.33
KLHDC3Q9BQ90 AL731563.1-201ENST00000442202 214 ntBASIC0.47□□□□□ -2.33
KLHDC3Q9BQ90 RNU7-67P-201ENST00000459003 62 ntBASIC0.47□□□□□ -2.33
KLHDC3Q9BQ90 AC007751.1-201ENST00000529260 376 ntBASIC0.47□□□□□ -2.33
KLHDC3Q9BQ90 AP003733.2-201ENST00000529409 171 ntBASIC0.47□□□□□ -2.33
KLHDC3Q9BQ90 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.47□□□□□ -2.33
KLHDC3Q9BQ90 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.46□□□□□ -2.34
KLHDC3Q9BQ90 Y_RNA.138-201ENST00000363462 102 ntBASIC0.46□□□□□ -2.34
KLHDC3Q9BQ90 SNORA63C-201ENST00000364578 129 ntBASIC0.46□□□□□ -2.34
KLHDC3Q9BQ90 SNORD24-201ENST00000383884 75 ntBASIC0.46□□□□□ -2.34
KLHDC3Q9BQ90 Y_RNA.486-201ENST00000384398 107 ntBASIC0.46□□□□□ -2.34
KLHDC3Q9BQ90 MTCO2P12-201ENST00000427426 682 ntBASIC0.46□□□□□ -2.34
KLHDC3Q9BQ90 RNU7-73P-201ENST00000458743 63 ntBASIC0.46□□□□□ -2.34
KLHDC3Q9BQ90 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.46□□□□□ -2.34
KLHDC3Q9BQ90 RNU4-54P-201ENST00000516428 129 ntBASIC0.46□□□□□ -2.34
KLHDC3Q9BQ90 RNU6-229P-201ENST00000516614 102 ntBASIC0.46□□□□□ -2.34
KLHDC3Q9BQ90 AC018659.1-201ENST00000551083 169 ntBASIC0.46□□□□□ -2.34
KLHDC3Q9BQ90 MIR4680-201ENST00000580906 66 ntBASIC0.46□□□□□ -2.34
KLHDC3Q9BQ90 AC006006.1-201ENST00000603082 144 ntBASIC0.46□□□□□ -2.34
KLHDC3Q9BQ90 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.46□□□□□ -2.34
KLHDC3Q9BQ90 snoU18.1-201ENST00000629629 71 ntBASIC0.46□□□□□ -2.34
KLHDC3Q9BQ90 Y_RNA.37-201ENST00000362606 108 ntBASIC0.45□□□□□ -2.34
KLHDC3Q9BQ90 RNU6-806P-201ENST00000365147 105 ntBASIC0.45□□□□□ -2.34
KLHDC3Q9BQ90 RNU6-934P-201ENST00000365154 107 ntBASIC0.45□□□□□ -2.34
KLHDC3Q9BQ90 RNU6-945P-201ENST00000383947 107 ntBASIC0.45□□□□□ -2.34
KLHDC3Q9BQ90 Y_RNA.494-201ENST00000384432 111 ntBASIC0.45□□□□□ -2.34
KLHDC3Q9BQ90 SNORA8.3-201ENST00000384679 139 ntBASIC0.45□□□□□ -2.34
KLHDC3Q9BQ90 MIR573-201ENST00000384964 99 ntBASIC0.45□□□□□ -2.34
KLHDC3Q9BQ90 MIR518F-201ENST00000384973 87 ntBASIC0.45□□□□□ -2.34
KLHDC3Q9BQ90 RNA5SP222-201ENST00000411039 105 ntBASIC0.45□□□□□ -2.34
KLHDC3Q9BQ90 AC092628.1-201ENST00000436250 252 ntBASIC0.45□□□□□ -2.34
KLHDC3Q9BQ90 RNU7-62P-201ENST00000458856 62 ntBASIC0.45□□□□□ -2.34
KLHDC3Q9BQ90 snoU13.21-201ENST00000459368 105 ntBASIC0.45□□□□□ -2.34
KLHDC3Q9BQ90 SERF1AP1-201ENST00000514575 187 ntBASIC0.45□□□□□ -2.34
KLHDC3Q9BQ90 SNORA18.4-201ENST00000516440 124 ntBASIC0.45□□□□□ -2.34
KLHDC3Q9BQ90 RNU7-53P-201ENST00000516705 60 ntBASIC0.45□□□□□ -2.34
KLHDC3Q9BQ90 RNU6-365P-201ENST00000517113 106 ntBASIC0.45□□□□□ -2.34
KLHDC3Q9BQ90 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.45□□□□□ -2.34
KLHDC3Q9BQ90 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.45□□□□□ -2.34
KLHDC3Q9BQ90 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.44□□□□□ -2.34
KLHDC3Q9BQ90 RNA5SP347-201ENST00000362445 119 ntBASIC0.44□□□□□ -2.34
KLHDC3Q9BQ90 RNU6-888P-201ENST00000363010 101 ntBASIC0.44□□□□□ -2.34
KLHDC3Q9BQ90 Y_RNA.84-201ENST00000363011 104 ntBASIC0.44□□□□□ -2.34
KLHDC3Q9BQ90 SNORA27-201ENST00000384323 126 ntBASIC0.44□□□□□ -2.34
KLHDC3Q9BQ90 MIR520F-201ENST00000384824 87 ntBASIC0.44□□□□□ -2.34
KLHDC3Q9BQ90 MIR548A2-201ENST00000384956 97 ntBASIC0.44□□□□□ -2.34
KLHDC3Q9BQ90 SNORA26-201ENST00000391286 122 ntBASIC0.44□□□□□ -2.34
KLHDC3Q9BQ90 RNA5SP193-201ENST00000410353 107 ntBASIC0.44□□□□□ -2.34
KLHDC3Q9BQ90 RNU6-177P-201ENST00000411257 104 ntBASIC0.44□□□□□ -2.34
KLHDC3Q9BQ90 RNU6-938P-201ENST00000411285 103 ntBASIC0.44□□□□□ -2.34
KLHDC3Q9BQ90 SNORD83.1-201ENST00000411362 77 ntBASIC0.44□□□□□ -2.34
KLHDC3Q9BQ90 AC090844.1-201ENST00000422019 156 ntBASIC0.44□□□□□ -2.34
KLHDC3Q9BQ90 RNU6-693P-201ENST00000516134 107 ntBASIC0.44□□□□□ -2.34
KLHDC3Q9BQ90 RNU6-977P-201ENST00000516411 103 ntBASIC0.44□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 193.1 ms