Protein–RNA interactions for Protein: Q99250

SCN2A, Sodium channel protein type 2 subunit alpha, humanhuman

Predictions only

Length 2,005 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2AQ99250 RNU6-383P-201ENST00000410864 94 ntBASIC0.64□□□□□ -2.31
SCN2AQ99250 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.64□□□□□ -2.31
SCN2AQ99250 SNORD2.1-201ENST00000458762 69 ntBASIC0.64□□□□□ -2.31
SCN2AQ99250 RNU6-197P-201ENST00000516680 100 ntBASIC0.64□□□□□ -2.31
SCN2AQ99250 Y_RNA.251-201ENST00000364551 99 ntBASIC0.64□□□□□ -2.31
SCN2AQ99250 RNY3P5-201ENST00000384127 102 ntBASIC0.64□□□□□ -2.31
SCN2AQ99250 SNORA40.5-201ENST00000391061 128 ntBASIC0.64□□□□□ -2.31
SCN2AQ99250 RNU6-1203P-201ENST00000410703 110 ntBASIC0.64□□□□□ -2.31
SCN2AQ99250 Y_RNA.621-201ENST00000411065 96 ntBASIC0.64□□□□□ -2.31
SCN2AQ99250 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.64□□□□□ -2.31
SCN2AQ99250 snoU13.2-201ENST00000459201 104 ntBASIC0.64□□□□□ -2.31
SCN2AQ99250 Y_RNA.637-201ENST00000459424 114 ntBASIC0.64□□□□□ -2.31
SCN2AQ99250 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.64□□□□□ -2.31
SCN2AQ99250 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.64□□□□□ -2.31
SCN2AQ99250 MIR4662B-201ENST00000579498 81 ntBASIC0.64□□□□□ -2.31
SCN2AQ99250 AL096861.1-201ENST00000610899 123 ntBASIC0.64□□□□□ -2.31
SCN2AQ99250 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC0.64□□□□□ -2.31
SCN2AQ99250 AC134026.1-201ENST00000623249 2239 ntBASIC0.63□□□□□ -2.31
SCN2AQ99250 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.63□□□□□ -2.31
SCN2AQ99250 SNORA25.1-201ENST00000362326 128 ntBASIC0.63□□□□□ -2.31
SCN2AQ99250 Y_RNA.82-201ENST00000363000 102 ntBASIC0.63□□□□□ -2.31
SCN2AQ99250 Y_RNA.92-201ENST00000363043 102 ntBASIC0.63□□□□□ -2.31
SCN2AQ99250 Y_RNA.217-201ENST00000364214 105 ntBASIC0.63□□□□□ -2.31
SCN2AQ99250 Y_RNA.235-201ENST00000364412 102 ntBASIC0.63□□□□□ -2.31
SCN2AQ99250 RNU6-1187P-201ENST00000364771 110 ntBASIC0.63□□□□□ -2.31
SCN2AQ99250 Y_RNA.306-201ENST00000365015 102 ntBASIC0.63□□□□□ -2.31
SCN2AQ99250 Y_RNA.308-201ENST00000365043 101 ntBASIC0.63□□□□□ -2.31
SCN2AQ99250 Y_RNA.312-201ENST00000365089 102 ntBASIC0.63□□□□□ -2.31
SCN2AQ99250 Y_RNA.322-201ENST00000365151 102 ntBASIC0.63□□□□□ -2.31
SCN2AQ99250 RNU6-1138P-201ENST00000365359 106 ntBASIC0.63□□□□□ -2.31
SCN2AQ99250 RNU6-847P-201ENST00000411115 108 ntBASIC0.63□□□□□ -2.31
SCN2AQ99250 RNU7-73P-201ENST00000458743 63 ntBASIC0.63□□□□□ -2.31
SCN2AQ99250 Y_RNA.650-201ENST00000459002 102 ntBASIC0.63□□□□□ -2.31
SCN2AQ99250 Y_RNA.641-201ENST00000459414 105 ntBASIC0.63□□□□□ -2.31
SCN2AQ99250 TRBVB-201ENST00000477100 408 ntBASIC0.63□□□□□ -2.31
SCN2AQ99250 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.63□□□□□ -2.31
SCN2AQ99250 RNU6-191P-201ENST00000516295 94 ntBASIC0.63□□□□□ -2.31
SCN2AQ99250 Y_RNA.777-201ENST00000516982 102 ntBASIC0.63□□□□□ -2.31
SCN2AQ99250 Y_RNA.771-201ENST00000598668 102 ntBASIC0.63□□□□□ -2.31
SCN2AQ99250 AL049861.1-201ENST00000603130 150 ntBASIC0.63□□□□□ -2.31
SCN2AQ99250 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.63□□□□□ -2.31
SCN2AQ99250 Y_RNA.789-201ENST00000622480 102 ntBASIC0.63□□□□□ -2.31
SCN2AQ99250 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.63□□□□□ -2.31
SCN2AQ99250 MIR377-201ENST00000362145 69 ntBASIC0.62□□□□□ -2.31
SCN2AQ99250 Y_RNA.7-201ENST00000362352 102 ntBASIC0.62□□□□□ -2.31
SCN2AQ99250 SNORA63-201ENST00000363450 132 ntBASIC0.62□□□□□ -2.31
SCN2AQ99250 Y_RNA.168-201ENST00000363740 102 ntBASIC0.62□□□□□ -2.31
SCN2AQ99250 Y_RNA.286-201ENST00000364813 102 ntBASIC0.62□□□□□ -2.31
SCN2AQ99250 RNU6-364P-201ENST00000384387 107 ntBASIC0.62□□□□□ -2.31
SCN2AQ99250 RNU2-11P-201ENST00000459191 187 ntBASIC0.62□□□□□ -2.31
SCN2AQ99250 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.62□□□□□ -2.31
SCN2AQ99250 MIR4719-201ENST00000585233 84 ntBASIC0.62□□□□□ -2.31
SCN2AQ99250 MIR924-201ENST00000638017 53 ntBASIC0.62□□□□□ -2.31
SCN2AQ99250 RNA5SP499-201ENST00000363982 119 ntBASIC0.62□□□□□ -2.31
SCN2AQ99250 Y_RNA.483-201ENST00000384380 101 ntBASIC0.62□□□□□ -2.31
SCN2AQ99250 SNORA79-201ENST00000408376 140 ntBASIC0.62□□□□□ -2.31
SCN2AQ99250 Y_RNA.590-201ENST00000410140 107 ntBASIC0.62□□□□□ -2.31
SCN2AQ99250 AC098869.1-201ENST00000481627 292 ntBASIC0.62□□□□□ -2.31
SCN2AQ99250 RNU6-998P-201ENST00000515894 101 ntBASIC0.62□□□□□ -2.31
SCN2AQ99250 RNU6-365P-201ENST00000517113 106 ntBASIC0.62□□□□□ -2.31
SCN2AQ99250 AL365205.2-201ENST00000594586 68 ntBASIC0.62□□□□□ -2.31
SCN2AQ99250 AC008737.2-201ENST00000599446 118 ntBASIC0.62□□□□□ -2.31
SCN2AQ99250 MIR6740-201ENST00000618268 113 ntBASIC0.62□□□□□ -2.31
SCN2AQ99250 AC015726.2-201ENST00000620112 122 ntBASIC0.62□□□□□ -2.31
SCN2AQ99250 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
SCN2AQ99250 Y_RNA.14-201ENST00000362415 103 ntBASIC0.61□□□□□ -2.31
SCN2AQ99250 SNORD115-34-201ENST00000362441 82 ntBASIC0.61□□□□□ -2.31
SCN2AQ99250 SNORD115-12-201ENST00000362583 82 ntBASIC0.61□□□□□ -2.31
SCN2AQ99250 SNORD115-29-201ENST00000362834 82 ntBASIC0.61□□□□□ -2.31
SCN2AQ99250 SNORD115-9-201ENST00000362912 82 ntBASIC0.61□□□□□ -2.31
SCN2AQ99250 SNORD115-21-201ENST00000362963 81 ntBASIC0.61□□□□□ -2.31
SCN2AQ99250 SNORD115-14-201ENST00000363090 81 ntBASIC0.61□□□□□ -2.31
SCN2AQ99250 SNORD115-13-201ENST00000363358 82 ntBASIC0.61□□□□□ -2.31
SCN2AQ99250 SNORD115-41-201ENST00000363608 82 ntBASIC0.61□□□□□ -2.31
SCN2AQ99250 SNORD115-11-201ENST00000363616 82 ntBASIC0.61□□□□□ -2.31
SCN2AQ99250 SNORD115-5-201ENST00000363633 82 ntBASIC0.61□□□□□ -2.31
SCN2AQ99250 SNORD115-39-201ENST00000363694 82 ntBASIC0.61□□□□□ -2.31
SCN2AQ99250 SNORD115-4-201ENST00000363810 82 ntBASIC0.61□□□□□ -2.31
SCN2AQ99250 SNORD115-16-201ENST00000363887 82 ntBASIC0.61□□□□□ -2.31
SCN2AQ99250 SNORD115-6-201ENST00000363942 82 ntBASIC0.61□□□□□ -2.31
SCN2AQ99250 SNORD115-42-201ENST00000364273 82 ntBASIC0.61□□□□□ -2.31
SCN2AQ99250 SNORD115-15-201ENST00000364809 81 ntBASIC0.61□□□□□ -2.31
SCN2AQ99250 SNORD115-1-201ENST00000364961 82 ntBASIC0.61□□□□□ -2.31
SCN2AQ99250 SNORD114-24-201ENST00000365029 72 ntBASIC0.61□□□□□ -2.31
SCN2AQ99250 SNORD115-26-201ENST00000365067 82 ntBASIC0.61□□□□□ -2.31
SCN2AQ99250 SNORD115-10-201ENST00000365073 81 ntBASIC0.61□□□□□ -2.31
SCN2AQ99250 SNORD115-43-201ENST00000365503 82 ntBASIC0.61□□□□□ -2.31
SCN2AQ99250 SNORD115-36-201ENST00000365629 82 ntBASIC0.61□□□□□ -2.31
SCN2AQ99250 SNORA27-201ENST00000384323 126 ntBASIC0.61□□□□□ -2.31
SCN2AQ99250 RNU6-1270P-201ENST00000517128 108 ntBASIC0.61□□□□□ -2.31
SCN2AQ99250 SNORD115-40-201ENST00000606510 82 ntBASIC0.61□□□□□ -2.31
SCN2AQ99250 RNA5SP62-201ENST00000363457 110 ntBASIC0.6□□□□□ -2.31
SCN2AQ99250 RNU6-268P-201ENST00000364174 107 ntBASIC0.6□□□□□ -2.31
SCN2AQ99250 RNU4-10P-201ENST00000364383 140 ntBASIC0.6□□□□□ -2.31
SCN2AQ99250 MIR518A1-201ENST00000385068 85 ntBASIC0.6□□□□□ -2.31
SCN2AQ99250 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.6□□□□□ -2.31
SCN2AQ99250 AC090844.1-201ENST00000422019 156 ntBASIC0.6□□□□□ -2.31
SCN2AQ99250 MIR4653-201ENST00000585107 83 ntBASIC0.6□□□□□ -2.31
SCN2AQ99250 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
SCN2AQ99250 RNA5SP457-201ENST00000363657 124 ntBASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms