Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 Y_RNA.20-201ENST00000362479 113 ntBASIC1.12□□□□□ -2.23
NR1H4Q96RI1 RNU6-888P-201ENST00000363010 101 ntBASIC1.12□□□□□ -2.23
NR1H4Q96RI1 Y_RNA.634-201ENST00000364811 113 ntBASIC1.12□□□□□ -2.23
NR1H4Q96RI1 SNORD61-201ENST00000384252 73 ntBASIC1.12□□□□□ -2.23
NR1H4Q96RI1 MIR200A-201ENST00000384875 90 ntBASIC1.12□□□□□ -2.23
NR1H4Q96RI1 SNORA67.5-201ENST00000391036 107 ntBASIC1.12□□□□□ -2.23
NR1H4Q96RI1 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC1.12□□□□□ -2.23
NR1H4Q96RI1 RNU1-123P-201ENST00000458950 160 ntBASIC1.12□□□□□ -2.23
NR1H4Q96RI1 RNU7-67P-201ENST00000459003 62 ntBASIC1.12□□□□□ -2.23
NR1H4Q96RI1 RNU6-453P-201ENST00000516819 85 ntBASIC1.12□□□□□ -2.23
NR1H4Q96RI1 MIR4503-201ENST00000582187 83 ntBASIC1.12□□□□□ -2.23
NR1H4Q96RI1 AC103810.9-201ENST00000606688 112 ntBASIC1.12□□□□□ -2.23
NR1H4Q96RI1 AC134878.1-201ENST00000619901 243 ntBASIC1.12□□□□□ -2.23
NR1H4Q96RI1 SNORD45.3-201ENST00000363836 72 ntBASIC1.11□□□□□ -2.23
NR1H4Q96RI1 SNORA20.1-201ENST00000364790 130 ntBASIC1.11□□□□□ -2.23
NR1H4Q96RI1 RNU6-484P-201ENST00000384016 107 ntBASIC1.11□□□□□ -2.23
NR1H4Q96RI1 MIR1185-1-201ENST00000408598 86 ntBASIC1.11□□□□□ -2.23
NR1H4Q96RI1 RPS23P4-201ENST00000487908 423 ntBASIC1.11□□□□□ -2.23
NR1H4Q96RI1 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.11□□□□□ -2.23
NR1H4Q96RI1 AP003716.2-201ENST00000528260 108 ntBASIC1.11□□□□□ -2.23
NR1H4Q96RI1 AP003484.1-201ENST00000530974 250 ntBASIC1.11□□□□□ -2.23
NR1H4Q96RI1 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
NR1H4Q96RI1 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
NR1H4Q96RI1 Y_RNA.37-201ENST00000362606 108 ntBASIC1.1□□□□□ -2.23
NR1H4Q96RI1 Y_RNA.308-201ENST00000365043 101 ntBASIC1.1□□□□□ -2.23
NR1H4Q96RI1 RNU6-396P-201ENST00000365369 105 ntBASIC1.1□□□□□ -2.23
NR1H4Q96RI1 MIR518F-201ENST00000384973 87 ntBASIC1.1□□□□□ -2.23
NR1H4Q96RI1 SNORA40.5-201ENST00000391061 128 ntBASIC1.1□□□□□ -2.23
NR1H4Q96RI1 AC108667.1-201ENST00000428618 249 ntBASIC1.1□□□□□ -2.23
NR1H4Q96RI1 SNRPGP8-201ENST00000454064 226 ntBASIC1.1□□□□□ -2.23
NR1H4Q96RI1 RPS26P48-201ENST00000491713 339 ntBASIC1.1□□□□□ -2.23
NR1H4Q96RI1 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.1□□□□□ -2.23
NR1H4Q96RI1 RNU6-1023P-201ENST00000516137 106 ntBASIC1.1□□□□□ -2.23
NR1H4Q96RI1 RNU4-71P-201ENST00000516258 113 ntBASIC1.1□□□□□ -2.23
NR1H4Q96RI1 MIR2115-201ENST00000516657 100 ntBASIC1.1□□□□□ -2.23
NR1H4Q96RI1 MIR3128-201ENST00000581957 66 ntBASIC1.1□□□□□ -2.23
NR1H4Q96RI1 HSPE1P19-201ENST00000603327 295 ntBASIC1.1□□□□□ -2.23
NR1H4Q96RI1 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.1□□□□□ -2.23
NR1H4Q96RI1 Y_RNA.144-201ENST00000363521 113 ntBASIC1.09□□□□□ -2.23
NR1H4Q96RI1 Y_RNA.269-201ENST00000364685 89 ntBASIC1.09□□□□□ -2.23
NR1H4Q96RI1 SNORD114-24-201ENST00000365029 72 ntBASIC1.09□□□□□ -2.23
NR1H4Q96RI1 RNU6-463P-201ENST00000384340 107 ntBASIC1.09□□□□□ -2.23
NR1H4Q96RI1 snoU13.16-201ENST00000459350 104 ntBASIC1.09□□□□□ -2.23
NR1H4Q96RI1 MTND1P19-201ENST00000511780 315 ntBASIC1.09□□□□□ -2.23
NR1H4Q96RI1 RNU6-197P-201ENST00000516680 100 ntBASIC1.09□□□□□ -2.23
NR1H4Q96RI1 AC007751.1-201ENST00000529260 376 ntBASIC1.09□□□□□ -2.23
NR1H4Q96RI1 AP000942.4-201ENST00000604811 241 ntBASIC1.09□□□□□ -2.23
NR1H4Q96RI1 MTND1P7-201ENST00000632801 297 ntBASIC1.09□□□□□ -2.23
NR1H4Q96RI1 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.09□□□□□ -2.24
NR1H4Q96RI1 Y_RNA.91-201ENST00000363042 107 ntBASIC1.08□□□□□ -2.24
NR1H4Q96RI1 RNY4P28-201ENST00000365281 93 ntBASIC1.08□□□□□ -2.24
NR1H4Q96RI1 Y_RNA.410-201ENST00000383992 113 ntBASIC1.08□□□□□ -2.24
NR1H4Q96RI1 SNORA17.3-201ENST00000391159 129 ntBASIC1.08□□□□□ -2.24
NR1H4Q96RI1 RNU2-13P-201ENST00000515909 113 ntBASIC1.08□□□□□ -2.24
NR1H4Q96RI1 AC004817.2-201ENST00000561794 651 ntBASIC1.08□□□□□ -2.24
NR1H4Q96RI1 MIR4744-201ENST00000581563 82 ntBASIC1.08□□□□□ -2.24
NR1H4Q96RI1 MIR4295-201ENST00000585286 85 ntBASIC1.08□□□□□ -2.24
NR1H4Q96RI1 AC097639.2-201ENST00000603159 172 ntBASIC1.08□□□□□ -2.24
NR1H4Q96RI1 AP000942.3-201ENST00000603702 160 ntBASIC1.08□□□□□ -2.24
NR1H4Q96RI1 AC011921.3-201ENST00000605540 361 ntBASIC1.08□□□□□ -2.24
NR1H4Q96RI1 AC012676.2-201ENST00000619258 186 ntBASIC1.08□□□□□ -2.24
NR1H4Q96RI1 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.08□□□□□ -2.24
NR1H4Q96RI1 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.08□□□□□ -2.24
NR1H4Q96RI1 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
NR1H4Q96RI1 Y_RNA.7-201ENST00000362352 102 ntBASIC1.07□□□□□ -2.24
NR1H4Q96RI1 Y_RNA.66-201ENST00000362862 102 ntBASIC1.07□□□□□ -2.24
NR1H4Q96RI1 RNU6-1187P-201ENST00000364771 110 ntBASIC1.07□□□□□ -2.24
NR1H4Q96RI1 SNORA27-201ENST00000384323 126 ntBASIC1.07□□□□□ -2.24
NR1H4Q96RI1 Y_RNA.539-201ENST00000384635 107 ntBASIC1.07□□□□□ -2.24
NR1H4Q96RI1 RNU6-493P-201ENST00000391321 108 ntBASIC1.07□□□□□ -2.24
NR1H4Q96RI1 MIR942-201ENST00000401111 86 ntBASIC1.07□□□□□ -2.24
NR1H4Q96RI1 AL392103.1-201ENST00000447000 198 ntBASIC1.07□□□□□ -2.24
NR1H4Q96RI1 AL121914.1-201ENST00000450188 156 ntBASIC1.07□□□□□ -2.24
NR1H4Q96RI1 AC004223.1-201ENST00000479840 271 ntBASIC1.07□□□□□ -2.24
NR1H4Q96RI1 Y_RNA.797-201ENST00000515977 94 ntBASIC1.07□□□□□ -2.24
NR1H4Q96RI1 RNU7-53P-201ENST00000516705 60 ntBASIC1.07□□□□□ -2.24
NR1H4Q96RI1 AC023827.1-201ENST00000569247 97 ntBASIC1.07□□□□□ -2.24
NR1H4Q96RI1 MIR378A-201ENST00000362177 66 ntBASIC1.06□□□□□ -2.24
NR1H4Q96RI1 Y_RNA.60-201ENST00000362831 98 ntBASIC1.06□□□□□ -2.24
NR1H4Q96RI1 Y_RNA.447-201ENST00000384184 113 ntBASIC1.06□□□□□ -2.24
NR1H4Q96RI1 MIR548A2-201ENST00000384956 97 ntBASIC1.06□□□□□ -2.24
NR1H4Q96RI1 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
NR1H4Q96RI1 SNORD58.1-201ENST00000391313 66 ntBASIC1.06□□□□□ -2.24
NR1H4Q96RI1 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.06□□□□□ -2.24
NR1H4Q96RI1 Y_RNA.626-201ENST00000411288 95 ntBASIC1.06□□□□□ -2.24
NR1H4Q96RI1 FABP5P4-201ENST00000437203 171 ntBASIC1.06□□□□□ -2.24
NR1H4Q96RI1 SNORD124-201ENST00000459577 104 ntBASIC1.06□□□□□ -2.24
NR1H4Q96RI1 RPS29P24-201ENST00000486345 171 ntBASIC1.06□□□□□ -2.24
NR1H4Q96RI1 SNORA18.4-201ENST00000516440 124 ntBASIC1.06□□□□□ -2.24
NR1H4Q96RI1 RNU6-958P-201ENST00000516995 106 ntBASIC1.06□□□□□ -2.24
NR1H4Q96RI1 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.06□□□□□ -2.24
NR1H4Q96RI1 MIR4781-201ENST00000585250 76 ntBASIC1.06□□□□□ -2.24
NR1H4Q96RI1 AL391516.1-201ENST00000554380 2449 ntBASIC1.05□□□□□ -2.24
NR1H4Q96RI1 Y_RNA.121-201ENST00000363309 113 ntBASIC1.05□□□□□ -2.24
NR1H4Q96RI1 Y_RNA.307-201ENST00000365022 117 ntBASIC1.05□□□□□ -2.24
NR1H4Q96RI1 RNU6-1189P-201ENST00000383958 107 ntBASIC1.05□□□□□ -2.24
NR1H4Q96RI1 RNU6-574P-201ENST00000384265 107 ntBASIC1.05□□□□□ -2.24
NR1H4Q96RI1 SNORA40.6-201ENST00000391153 128 ntBASIC1.05□□□□□ -2.24
NR1H4Q96RI1 SNORD111-201ENST00000408139 94 ntBASIC1.05□□□□□ -2.24
NR1H4Q96RI1 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 199.8 ms