Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 SNORD115-28-201ENST00000363931 81 ntBASIC0.65□□□□□ -2.31
RAB3IPQ96QF0 Y_RNA.217-201ENST00000364214 105 ntBASIC0.65□□□□□ -2.31
RAB3IPQ96QF0 RNU6-934P-201ENST00000365154 107 ntBASIC0.65□□□□□ -2.31
RAB3IPQ96QF0 SNORA36.2-201ENST00000384004 127 ntBASIC0.65□□□□□ -2.31
RAB3IPQ96QF0 AC004941.2-201ENST00000427009 228 ntBASIC0.65□□□□□ -2.31
RAB3IPQ96QF0 Y_RNA.641-201ENST00000459414 105 ntBASIC0.65□□□□□ -2.31
RAB3IPQ96QF0 MTCO2P24-201ENST00000515611 426 ntBASIC0.65□□□□□ -2.31
RAB3IPQ96QF0 RNU6-693P-201ENST00000516134 107 ntBASIC0.65□□□□□ -2.31
RAB3IPQ96QF0 MIR4264-201ENST00000583520 66 ntBASIC0.65□□□□□ -2.31
RAB3IPQ96QF0 MIR3171-201ENST00000584270 74 ntBASIC0.65□□□□□ -2.31
RAB3IPQ96QF0 Y_RNA.802-201ENST00000614892 130 ntBASIC0.65□□□□□ -2.31
RAB3IPQ96QF0 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.65□□□□□ -2.31
RAB3IPQ96QF0 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.31
RAB3IPQ96QF0 MIR377-201ENST00000362145 69 ntBASIC0.64□□□□□ -2.31
RAB3IPQ96QF0 SNORD115-34-201ENST00000362441 82 ntBASIC0.64□□□□□ -2.31
RAB3IPQ96QF0 SNORD115-12-201ENST00000362583 82 ntBASIC0.64□□□□□ -2.31
RAB3IPQ96QF0 SNORD115-29-201ENST00000362834 82 ntBASIC0.64□□□□□ -2.31
RAB3IPQ96QF0 SNORD115-9-201ENST00000362912 82 ntBASIC0.64□□□□□ -2.31
RAB3IPQ96QF0 SNORD115-21-201ENST00000362963 81 ntBASIC0.64□□□□□ -2.31
RAB3IPQ96QF0 SNORD115-14-201ENST00000363090 81 ntBASIC0.64□□□□□ -2.31
RAB3IPQ96QF0 SNORD115-13-201ENST00000363358 82 ntBASIC0.64□□□□□ -2.31
RAB3IPQ96QF0 SNORD115-41-201ENST00000363608 82 ntBASIC0.64□□□□□ -2.31
RAB3IPQ96QF0 SNORD115-11-201ENST00000363616 82 ntBASIC0.64□□□□□ -2.31
RAB3IPQ96QF0 SNORD115-5-201ENST00000363633 82 ntBASIC0.64□□□□□ -2.31
RAB3IPQ96QF0 SNORD115-39-201ENST00000363694 82 ntBASIC0.64□□□□□ -2.31
RAB3IPQ96QF0 SNORD115-4-201ENST00000363810 82 ntBASIC0.64□□□□□ -2.31
RAB3IPQ96QF0 SNORD115-16-201ENST00000363887 82 ntBASIC0.64□□□□□ -2.31
RAB3IPQ96QF0 SNORD115-6-201ENST00000363942 82 ntBASIC0.64□□□□□ -2.31
RAB3IPQ96QF0 SNORD115-42-201ENST00000364273 82 ntBASIC0.64□□□□□ -2.31
RAB3IPQ96QF0 Y_RNA.276-201ENST00000364732 109 ntBASIC0.64□□□□□ -2.31
RAB3IPQ96QF0 SNORD115-15-201ENST00000364809 81 ntBASIC0.64□□□□□ -2.31
RAB3IPQ96QF0 SNORD115-1-201ENST00000364961 82 ntBASIC0.64□□□□□ -2.31
RAB3IPQ96QF0 SNORD115-26-201ENST00000365067 82 ntBASIC0.64□□□□□ -2.31
RAB3IPQ96QF0 SNORD115-10-201ENST00000365073 81 ntBASIC0.64□□□□□ -2.31
RAB3IPQ96QF0 RNU6-580P-201ENST00000365159 107 ntBASIC0.64□□□□□ -2.31
RAB3IPQ96QF0 SNORD115-43-201ENST00000365503 82 ntBASIC0.64□□□□□ -2.31
RAB3IPQ96QF0 SNORD115-36-201ENST00000365629 82 ntBASIC0.64□□□□□ -2.31
RAB3IPQ96QF0 MIR548J-201ENST00000408833 112 ntBASIC0.64□□□□□ -2.31
RAB3IPQ96QF0 MTND5P22-201ENST00000458380 195 ntBASIC0.64□□□□□ -2.31
RAB3IPQ96QF0 SCARNA24.2-201ENST00000516968 130 ntBASIC0.64□□□□□ -2.31
RAB3IPQ96QF0 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.64□□□□□ -2.31
RAB3IPQ96QF0 MIR4771-2-201ENST00000577758 74 ntBASIC0.64□□□□□ -2.31
RAB3IPQ96QF0 MIR4662B-201ENST00000579498 81 ntBASIC0.64□□□□□ -2.31
RAB3IPQ96QF0 MIR4680-201ENST00000580906 66 ntBASIC0.64□□□□□ -2.31
RAB3IPQ96QF0 MIR4771-1-201ENST00000582617 74 ntBASIC0.64□□□□□ -2.31
RAB3IPQ96QF0 SNORD115-40-201ENST00000606510 82 ntBASIC0.64□□□□□ -2.31
RAB3IPQ96QF0 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.64□□□□□ -2.31
RAB3IPQ96QF0 Y_RNA.152-201ENST00000363578 100 ntBASIC0.63□□□□□ -2.31
RAB3IPQ96QF0 SNORA24-201ENST00000384096 131 ntBASIC0.63□□□□□ -2.31
RAB3IPQ96QF0 MIR520F-201ENST00000384824 87 ntBASIC0.63□□□□□ -2.31
RAB3IPQ96QF0 MIR598-201ENST00000384868 97 ntBASIC0.63□□□□□ -2.31
RAB3IPQ96QF0 MIR92A1-201ENST00000385233 78 ntBASIC0.63□□□□□ -2.31
RAB3IPQ96QF0 AC087499.4-201ENST00000448505 178 ntBASIC0.63□□□□□ -2.31
RAB3IPQ96QF0 RNU6-1143P-201ENST00000516125 104 ntBASIC0.63□□□□□ -2.31
RAB3IPQ96QF0 RNU6-977P-201ENST00000516411 103 ntBASIC0.63□□□□□ -2.31
RAB3IPQ96QF0 RNU4-54P-201ENST00000516428 129 ntBASIC0.63□□□□□ -2.31
RAB3IPQ96QF0 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC0.63□□□□□ -2.31
RAB3IPQ96QF0 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.63□□□□□ -2.31
RAB3IPQ96QF0 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
RAB3IPQ96QF0 Y_RNA.24-201ENST00000362508 103 ntBASIC0.62□□□□□ -2.31
RAB3IPQ96QF0 RNU6-369P-201ENST00000362515 102 ntBASIC0.62□□□□□ -2.31
RAB3IPQ96QF0 Y_RNA.84-201ENST00000363011 104 ntBASIC0.62□□□□□ -2.31
RAB3IPQ96QF0 Y_RNA.572-201ENST00000384757 98 ntBASIC0.62□□□□□ -2.31
RAB3IPQ96QF0 MIR526A2-201ENST00000390198 65 ntBASIC0.62□□□□□ -2.31
RAB3IPQ96QF0 AC244023.1-201ENST00000426884 112 ntBASIC0.62□□□□□ -2.31
RAB3IPQ96QF0 SNORA18.4-201ENST00000516440 124 ntBASIC0.62□□□□□ -2.31
RAB3IPQ96QF0 RNU6-1270P-201ENST00000517128 108 ntBASIC0.62□□□□□ -2.31
RAB3IPQ96QF0 AC100767.1-201ENST00000528178 123 ntBASIC0.62□□□□□ -2.31
RAB3IPQ96QF0 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.62□□□□□ -2.31
RAB3IPQ96QF0 AC242498.1-201ENST00000604134 111 ntBASIC0.62□□□□□ -2.31
RAB3IPQ96QF0 AP000942.4-201ENST00000604811 241 ntBASIC0.62□□□□□ -2.31
RAB3IPQ96QF0 AC022709.1-201ENST00000615967 87 ntBASIC0.62□□□□□ -2.31
RAB3IPQ96QF0 Y_RNA.37-201ENST00000362606 108 ntBASIC0.61□□□□□ -2.31
RAB3IPQ96QF0 RNU6-945P-201ENST00000383947 107 ntBASIC0.61□□□□□ -2.31
RAB3IPQ96QF0 RNY1P8-201ENST00000383970 114 ntBASIC0.61□□□□□ -2.31
RAB3IPQ96QF0 MIR518F-201ENST00000384973 87 ntBASIC0.61□□□□□ -2.31
RAB3IPQ96QF0 MIR520H-201ENST00000385126 88 ntBASIC0.61□□□□□ -2.31
RAB3IPQ96QF0 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.61□□□□□ -2.31
RAB3IPQ96QF0 AL731563.1-201ENST00000442202 214 ntBASIC0.61□□□□□ -2.31
RAB3IPQ96QF0 RNU7-62P-201ENST00000458856 62 ntBASIC0.61□□□□□ -2.31
RAB3IPQ96QF0 RNA5SP121-201ENST00000516537 101 ntBASIC0.61□□□□□ -2.31
RAB3IPQ96QF0 RNA5SP480-201ENST00000516840 109 ntBASIC0.61□□□□□ -2.31
RAB3IPQ96QF0 AP003484.1-201ENST00000530974 250 ntBASIC0.61□□□□□ -2.31
RAB3IPQ96QF0 AC020661.2-201ENST00000560114 134 ntBASIC0.61□□□□□ -2.31
RAB3IPQ96QF0 AL590095.2-201ENST00000604136 117 ntBASIC0.61□□□□□ -2.31
RAB3IPQ96QF0 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.6□□□□□ -2.31
RAB3IPQ96QF0 Y_RNA.36-201ENST00000362602 112 ntBASIC0.6□□□□□ -2.31
RAB3IPQ96QF0 Y_RNA.153-201ENST00000363615 91 ntBASIC0.6□□□□□ -2.31
RAB3IPQ96QF0 RNU6-211P-201ENST00000384047 107 ntBASIC0.6□□□□□ -2.31
RAB3IPQ96QF0 SNORD61-201ENST00000384252 73 ntBASIC0.6□□□□□ -2.31
RAB3IPQ96QF0 MIR7-2-201ENST00000384970 110 ntBASIC0.6□□□□□ -2.31
RAB3IPQ96QF0 RNU6-913P-201ENST00000390913 95 ntBASIC0.6□□□□□ -2.31
RAB3IPQ96QF0 SNORA40.5-201ENST00000391061 128 ntBASIC0.6□□□□□ -2.31
RAB3IPQ96QF0 RNU6-938P-201ENST00000411285 103 ntBASIC0.6□□□□□ -2.31
RAB3IPQ96QF0 SERF1AP1-201ENST00000514575 187 ntBASIC0.6□□□□□ -2.31
RAB3IPQ96QF0 RNU6-1137P-201ENST00000517073 99 ntBASIC0.6□□□□□ -2.31
RAB3IPQ96QF0 RNU6-365P-201ENST00000517113 106 ntBASIC0.6□□□□□ -2.31
RAB3IPQ96QF0 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.59□□□□□ -2.31
RAB3IPQ96QF0 Y_RNA.229-201ENST00000364347 113 ntBASIC0.59□□□□□ -2.31
RAB3IPQ96QF0 SNORA27-201ENST00000384323 126 ntBASIC0.59□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms