Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 RNU6-1165P-201ENST00000410119 107 ntBASIC0.14□□□□□ -2.39
RPRD1AQ96P16 RNU6-383P-201ENST00000410864 94 ntBASIC0.14□□□□□ -2.39
RPRD1AQ96P16 AC138393.2-201ENST00000414742 246 ntBASIC0.14□□□□□ -2.39
RPRD1AQ96P16 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.14□□□□□ -2.39
RPRD1AQ96P16 HMGN1P33-201ENST00000432945 451 ntBASIC0.14□□□□□ -2.39
RPRD1AQ96P16 RNU7-185P-201ENST00000459215 60 ntBASIC0.14□□□□□ -2.39
RPRD1AQ96P16 SEPT14P8-201ENST00000508026 178 ntBASIC0.14□□□□□ -2.39
RPRD1AQ96P16 Y_RNA.713-201ENST00000517013 96 ntBASIC0.14□□□□□ -2.39
RPRD1AQ96P16 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.14□□□□□ -2.39
RPRD1AQ96P16 SNORD113-5-201ENST00000607261 78 ntBASIC0.14□□□□□ -2.39
RPRD1AQ96P16 MIR8055-201ENST00000610739 97 ntBASIC0.14□□□□□ -2.39
RPRD1AQ96P16 AL132765.2-201ENST00000610812 351 ntBASIC0.14□□□□□ -2.39
RPRD1AQ96P16 PART1_1.1-201ENST00000611761 217 ntBASIC0.14□□□□□ -2.39
RPRD1AQ96P16 AC139792.2-201ENST00000624218 587 ntBASIC0.14□□□□□ -2.39
RPRD1AQ96P16 SNORD115-28-201ENST00000363931 81 ntBASIC0.13□□□□□ -2.39
RPRD1AQ96P16 Y_RNA.252-201ENST00000364556 101 ntBASIC0.13□□□□□ -2.39
RPRD1AQ96P16 RNU6-364P-201ENST00000384387 107 ntBASIC0.13□□□□□ -2.39
RPRD1AQ96P16 MIR518F-201ENST00000384973 87 ntBASIC0.13□□□□□ -2.39
RPRD1AQ96P16 RNU6-1319P-201ENST00000390855 104 ntBASIC0.13□□□□□ -2.39
RPRD1AQ96P16 RNU6-747P-201ENST00000390928 104 ntBASIC0.13□□□□□ -2.39
RPRD1AQ96P16 RNU6-241P-201ENST00000391148 104 ntBASIC0.13□□□□□ -2.39
RPRD1AQ96P16 MIR1197-201ENST00000408818 88 ntBASIC0.13□□□□□ -2.39
RPRD1AQ96P16 RNU6-447P-201ENST00000410293 104 ntBASIC0.13□□□□□ -2.39
RPRD1AQ96P16 RNU6-1118P-201ENST00000410382 104 ntBASIC0.13□□□□□ -2.39
RPRD1AQ96P16 RNU6-1076P-201ENST00000410397 104 ntBASIC0.13□□□□□ -2.39
RPRD1AQ96P16 RNU6-355P-201ENST00000410427 104 ntBASIC0.13□□□□□ -2.39
RPRD1AQ96P16 RNU6-791P-201ENST00000410467 104 ntBASIC0.13□□□□□ -2.39
RPRD1AQ96P16 RNU6-705P-201ENST00000410601 104 ntBASIC0.13□□□□□ -2.39
RPRD1AQ96P16 RNU6-1100P-201ENST00000410691 104 ntBASIC0.13□□□□□ -2.39
RPRD1AQ96P16 RNU6-860P-201ENST00000410860 104 ntBASIC0.13□□□□□ -2.39
RPRD1AQ96P16 RNU6-1217P-201ENST00000411276 104 ntBASIC0.13□□□□□ -2.39
RPRD1AQ96P16 RNU6-938P-201ENST00000411285 103 ntBASIC0.13□□□□□ -2.39
RPRD1AQ96P16 RNU6-785P-201ENST00000411324 104 ntBASIC0.13□□□□□ -2.39
RPRD1AQ96P16 AC023449.1-201ENST00000454464 154 ntBASIC0.13□□□□□ -2.39
RPRD1AQ96P16 SNORD92-201ENST00000585078 85 ntBASIC0.13□□□□□ -2.39
RPRD1AQ96P16 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.13□□□□□ -2.39
RPRD1AQ96P16 U6.90-201ENST00000614007 104 ntBASIC0.13□□□□□ -2.39
RPRD1AQ96P16 U6.70-201ENST00000620287 104 ntBASIC0.13□□□□□ -2.39
RPRD1AQ96P16 AC078938.1-201ENST00000620993 318 ntBASIC0.13□□□□□ -2.39
RPRD1AQ96P16 AC099654.14-201ENST00000638599 341 ntBASIC0.13□□□□□ -2.39
RPRD1AQ96P16 Y_RNA.5-201ENST00000362334 102 ntBASIC0.12□□□□□ -2.39
RPRD1AQ96P16 SNORD118-201ENST00000363593 134 ntBASIC0.12□□□□□ -2.39
RPRD1AQ96P16 RNU6-1205P-201ENST00000363625 106 ntBASIC0.12□□□□□ -2.39
RPRD1AQ96P16 Y_RNA.222-201ENST00000364264 102 ntBASIC0.12□□□□□ -2.39
RPRD1AQ96P16 RNU6-1138P-201ENST00000365359 106 ntBASIC0.12□□□□□ -2.39
RPRD1AQ96P16 Y_RNA.471-201ENST00000384312 102 ntBASIC0.12□□□□□ -2.39
RPRD1AQ96P16 SNORA8.2-201ENST00000384372 139 ntBASIC0.12□□□□□ -2.39
RPRD1AQ96P16 MIR1295A-201ENST00000408463 79 ntBASIC0.12□□□□□ -2.39
RPRD1AQ96P16 MIR1257-201ENST00000408490 117 ntBASIC0.12□□□□□ -2.39
RPRD1AQ96P16 AC087499.4-201ENST00000448505 178 ntBASIC0.12□□□□□ -2.39
RPRD1AQ96P16 Y_RNA.632-201ENST00000459189 102 ntBASIC0.12□□□□□ -2.39
RPRD1AQ96P16 AL049861.1-201ENST00000603130 150 ntBASIC0.12□□□□□ -2.39
RPRD1AQ96P16 Y_RNA.115-201ENST00000363272 98 ntBASIC0.11□□□□□ -2.39
RPRD1AQ96P16 RNU6-144P-201ENST00000383951 107 ntBASIC0.11□□□□□ -2.39
RPRD1AQ96P16 RNA5SP299-201ENST00000391203 116 ntBASIC0.11□□□□□ -2.39
RPRD1AQ96P16 Y_RNA.619-201ENST00000410951 90 ntBASIC0.11□□□□□ -2.39
RPRD1AQ96P16 snoU13.2-201ENST00000459201 104 ntBASIC0.11□□□□□ -2.39
RPRD1AQ96P16 RNU7-156P-201ENST00000517214 74 ntBASIC0.11□□□□□ -2.39
RPRD1AQ96P16 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC0.11□□□□□ -2.39
RPRD1AQ96P16 MIR6718-201ENST00000616153 80 ntBASIC0.11□□□□□ -2.39
RPRD1AQ96P16 uc_338.16-201ENST00000621804 95 ntBASIC0.11□□□□□ -2.39
RPRD1AQ96P16 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.1□□□□□ -2.39
RPRD1AQ96P16 RNA5SP325-201ENST00000363756 130 ntBASIC0.1□□□□□ -2.39
RPRD1AQ96P16 Y_RNA.526-201ENST00000384572 110 ntBASIC0.1□□□□□ -2.39
RPRD1AQ96P16 SNORA40.5-201ENST00000391061 128 ntBASIC0.1□□□□□ -2.39
RPRD1AQ96P16 RNU6-602P-201ENST00000411155 105 ntBASIC0.1□□□□□ -2.39
RPRD1AQ96P16 MTCO1P5-201ENST00000433573 344 ntBASIC0.1□□□□□ -2.39
RPRD1AQ96P16 RNU6-764P-201ENST00000516396 105 ntBASIC0.1□□□□□ -2.39
RPRD1AQ96P16 RNU7-53P-201ENST00000516705 60 ntBASIC0.1□□□□□ -2.39
RPRD1AQ96P16 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.1□□□□□ -2.39
RPRD1AQ96P16 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC0.1□□□□□ -2.39
RPRD1AQ96P16 MIR3678-201ENST00000578455 94 ntBASIC0.1□□□□□ -2.39
RPRD1AQ96P16 Y_RNA.37-201ENST00000362606 108 ntBASIC0.09□□□□□ -2.4
RPRD1AQ96P16 Y_RNA.390-201ENST00000383932 102 ntBASIC0.09□□□□□ -2.4
RPRD1AQ96P16 RNU6-815P-201ENST00000384080 113 ntBASIC0.09□□□□□ -2.4
RPRD1AQ96P16 MIR563-201ENST00000385080 79 ntBASIC0.09□□□□□ -2.4
RPRD1AQ96P16 Y_RNA.587-201ENST00000391210 103 ntBASIC0.09□□□□□ -2.4
RPRD1AQ96P16 SNORD19B-201ENST00000459623 84 ntBASIC0.09□□□□□ -2.4
RPRD1AQ96P16 RNU6-1046P-201ENST00000516538 107 ntBASIC0.09□□□□□ -2.4
RPRD1AQ96P16 AC040926.1-201ENST00000530195 238 ntBASIC0.09□□□□□ -2.4
RPRD1AQ96P16 AC122108.2-201ENST00000611946 526 ntBASIC0.09□□□□□ -2.4
RPRD1AQ96P16 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.09□□□□□ -2.4
RPRD1AQ96P16 RNU6-1309P-201ENST00000363305 108 ntBASIC0.08□□□□□ -2.4
RPRD1AQ96P16 Y_RNA.136-201ENST00000363444 102 ntBASIC0.08□□□□□ -2.4
RPRD1AQ96P16 SNORA1.1-201ENST00000364671 133 ntBASIC0.08□□□□□ -2.4
RPRD1AQ96P16 SNORA27-201ENST00000384323 126 ntBASIC0.08□□□□□ -2.4
RPRD1AQ96P16 Y_RNA.476-201ENST00000384347 108 ntBASIC0.08□□□□□ -2.4
RPRD1AQ96P16 Y_RNA.486-201ENST00000384398 107 ntBASIC0.08□□□□□ -2.4
RPRD1AQ96P16 RNU6-102P-201ENST00000384485 104 ntBASIC0.08□□□□□ -2.4
RPRD1AQ96P16 Y_RNA.567-201ENST00000384736 106 ntBASIC0.08□□□□□ -2.4
RPRD1AQ96P16 MIR548A2-201ENST00000384956 97 ntBASIC0.08□□□□□ -2.4
RPRD1AQ96P16 RNA5SP496-201ENST00000391240 109 ntBASIC0.08□□□□□ -2.4
RPRD1AQ96P16 RNU6-1190P-201ENST00000410811 104 ntBASIC0.08□□□□□ -2.4
RPRD1AQ96P16 AC073261.1-201ENST00000429409 121 ntBASIC0.08□□□□□ -2.4
RPRD1AQ96P16 Y_RNA.637-201ENST00000459424 114 ntBASIC0.08□□□□□ -2.4
RPRD1AQ96P16 RPS29P24-201ENST00000486345 171 ntBASIC0.08□□□□□ -2.4
RPRD1AQ96P16 MRPS35P2-201ENST00000508242 191 ntBASIC0.08□□□□□ -2.4
RPRD1AQ96P16 RNU6-863P-201ENST00000515989 104 ntBASIC0.08□□□□□ -2.4
RPRD1AQ96P16 SNORD77.4-201ENST00000516158 81 ntBASIC0.08□□□□□ -2.4
RPRD1AQ96P16 SNORD36C-201ENST00000516733 66 ntBASIC0.08□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 193.4 ms