Protein–RNA interactions for Protein: Q96NG5

ZNF558, Zinc finger protein 558, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558Q96NG5 Y_RNA.666-201ENST00000516187 112 ntBASIC0.84□□□□□ -2.27
ZNF558Q96NG5 RNU6-1153P-201ENST00000516760 105 ntBASIC0.84□□□□□ -2.27
ZNF558Q96NG5 MIR548AO-201ENST00000579992 96 ntBASIC0.84□□□□□ -2.27
ZNF558Q96NG5 AC243994.1-201ENST00000618627 109 ntBASIC0.84□□□□□ -2.27
ZNF558Q96NG5 Y_RNA.486-201ENST00000384398 107 ntBASIC0.83□□□□□ -2.28
ZNF558Q96NG5 RNU6-1289P-201ENST00000384431 106 ntBASIC0.83□□□□□ -2.28
ZNF558Q96NG5 SNORA8.3-201ENST00000384679 139 ntBASIC0.83□□□□□ -2.28
ZNF558Q96NG5 MT-TN-201ENST00000387400 73 ntBASIC0.83□□□□□ -2.28
ZNF558Q96NG5 AL035398.1-201ENST00000430869 322 ntBASIC0.83□□□□□ -2.28
ZNF558Q96NG5 AC087499.4-201ENST00000448505 178 ntBASIC0.83□□□□□ -2.28
ZNF558Q96NG5 RNU6-1110P-201ENST00000516462 101 ntBASIC0.83□□□□□ -2.28
ZNF558Q96NG5 AC007751.1-201ENST00000529260 376 ntBASIC0.83□□□□□ -2.28
ZNF558Q96NG5 AC006006.1-201ENST00000603082 144 ntBASIC0.83□□□□□ -2.28
ZNF558Q96NG5 AP001282.2-201ENST00000616149 309 ntBASIC0.83□□□□□ -2.28
ZNF558Q96NG5 MIR6835-201ENST00000621552 64 ntBASIC0.83□□□□□ -2.28
ZNF558Q96NG5 MIR6866-201ENST00000638146 69 ntBASIC0.83□□□□□ -2.28
ZNF558Q96NG5 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.83□□□□□ -2.28
ZNF558Q96NG5 SNORD115-34-201ENST00000362441 82 ntBASIC0.82□□□□□ -2.28
ZNF558Q96NG5 SNORD115-12-201ENST00000362583 82 ntBASIC0.82□□□□□ -2.28
ZNF558Q96NG5 SNORD115-29-201ENST00000362834 82 ntBASIC0.82□□□□□ -2.28
ZNF558Q96NG5 SNORD115-9-201ENST00000362912 82 ntBASIC0.82□□□□□ -2.28
ZNF558Q96NG5 SNORD115-21-201ENST00000362963 81 ntBASIC0.82□□□□□ -2.28
ZNF558Q96NG5 SNORD115-14-201ENST00000363090 81 ntBASIC0.82□□□□□ -2.28
ZNF558Q96NG5 SNORD115-13-201ENST00000363358 82 ntBASIC0.82□□□□□ -2.28
ZNF558Q96NG5 SNORD115-41-201ENST00000363608 82 ntBASIC0.82□□□□□ -2.28
ZNF558Q96NG5 SNORD115-11-201ENST00000363616 82 ntBASIC0.82□□□□□ -2.28
ZNF558Q96NG5 SNORD115-5-201ENST00000363633 82 ntBASIC0.82□□□□□ -2.28
ZNF558Q96NG5 SNORD115-39-201ENST00000363694 82 ntBASIC0.82□□□□□ -2.28
ZNF558Q96NG5 Y_RNA.168-201ENST00000363740 102 ntBASIC0.82□□□□□ -2.28
ZNF558Q96NG5 SNORD115-4-201ENST00000363810 82 ntBASIC0.82□□□□□ -2.28
ZNF558Q96NG5 SNORD115-16-201ENST00000363887 82 ntBASIC0.82□□□□□ -2.28
ZNF558Q96NG5 SNORD115-6-201ENST00000363942 82 ntBASIC0.82□□□□□ -2.28
ZNF558Q96NG5 SNORD115-42-201ENST00000364273 82 ntBASIC0.82□□□□□ -2.28
ZNF558Q96NG5 SNORD115-15-201ENST00000364809 81 ntBASIC0.82□□□□□ -2.28
ZNF558Q96NG5 SNORD115-1-201ENST00000364961 82 ntBASIC0.82□□□□□ -2.28
ZNF558Q96NG5 SNORD115-26-201ENST00000365067 82 ntBASIC0.82□□□□□ -2.28
ZNF558Q96NG5 SNORD115-10-201ENST00000365073 81 ntBASIC0.82□□□□□ -2.28
ZNF558Q96NG5 SNORD115-43-201ENST00000365503 82 ntBASIC0.82□□□□□ -2.28
ZNF558Q96NG5 SNORD115-36-201ENST00000365629 82 ntBASIC0.82□□□□□ -2.28
ZNF558Q96NG5 SNORD24-201ENST00000383884 75 ntBASIC0.82□□□□□ -2.28
ZNF558Q96NG5 RNY1P4-201ENST00000384595 115 ntBASIC0.82□□□□□ -2.28
ZNF558Q96NG5 MIR626-201ENST00000385032 94 ntBASIC0.82□□□□□ -2.28
ZNF558Q96NG5 AC107297.1-201ENST00000459991 176 ntBASIC0.82□□□□□ -2.28
ZNF558Q96NG5 RNU6-351P-201ENST00000516097 100 ntBASIC0.82□□□□□ -2.28
ZNF558Q96NG5 SCARNA24.2-201ENST00000516968 130 ntBASIC0.82□□□□□ -2.28
ZNF558Q96NG5 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.82□□□□□ -2.28
ZNF558Q96NG5 SNORD115-40-201ENST00000606510 82 ntBASIC0.82□□□□□ -2.28
ZNF558Q96NG5 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.81□□□□□ -2.28
ZNF558Q96NG5 MIR377-201ENST00000362145 69 ntBASIC0.81□□□□□ -2.28
ZNF558Q96NG5 Y_RNA.44-201ENST00000362676 108 ntBASIC0.81□□□□□ -2.28
ZNF558Q96NG5 SNORD115-28-201ENST00000363931 81 ntBASIC0.81□□□□□ -2.28
ZNF558Q96NG5 Y_RNA.205-201ENST00000364128 113 ntBASIC0.81□□□□□ -2.28
ZNF558Q96NG5 RNU4-10P-201ENST00000364383 140 ntBASIC0.81□□□□□ -2.28
ZNF558Q96NG5 MIR508-201ENST00000384857 115 ntBASIC0.81□□□□□ -2.28
ZNF558Q96NG5 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.81□□□□□ -2.28
ZNF558Q96NG5 TRBVB-201ENST00000477100 408 ntBASIC0.81□□□□□ -2.28
ZNF558Q96NG5 AC113410.1-201ENST00000505029 247 ntBASIC0.81□□□□□ -2.28
ZNF558Q96NG5 RNU6-570P-201ENST00000517051 105 ntBASIC0.81□□□□□ -2.28
ZNF558Q96NG5 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.81□□□□□ -2.28
ZNF558Q96NG5 AC025627.3-201ENST00000582078 182 ntBASIC0.81□□□□□ -2.28
ZNF558Q96NG5 AL353765.1-201ENST00000605514 183 ntBASIC0.81□□□□□ -2.28
ZNF558Q96NG5 RNU6-94P-201ENST00000607728 107 ntBASIC0.81□□□□□ -2.28
ZNF558Q96NG5 MIR335-201ENST00000362173 94 ntBASIC0.8□□□□□ -2.28
ZNF558Q96NG5 Y_RNA.229-201ENST00000364347 113 ntBASIC0.8□□□□□ -2.28
ZNF558Q96NG5 RNU6-580P-201ENST00000365159 107 ntBASIC0.8□□□□□ -2.28
ZNF558Q96NG5 AC006461.1-201ENST00000412637 326 ntBASIC0.8□□□□□ -2.28
ZNF558Q96NG5 AC067940.1-201ENST00000458411 300 ntBASIC0.8□□□□□ -2.28
ZNF558Q96NG5 SNORD2.1-201ENST00000458762 69 ntBASIC0.8□□□□□ -2.28
ZNF558Q96NG5 snoU13.16-201ENST00000459350 104 ntBASIC0.8□□□□□ -2.28
ZNF558Q96NG5 AC100767.1-201ENST00000528178 123 ntBASIC0.8□□□□□ -2.28
ZNF558Q96NG5 MIR4653-201ENST00000585107 83 ntBASIC0.8□□□□□ -2.28
ZNF558Q96NG5 MIR6513-201ENST00000621188 64 ntBASIC0.8□□□□□ -2.28
ZNF558Q96NG5 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
ZNF558Q96NG5 Y_RNA.24-201ENST00000362508 103 ntBASIC0.79□□□□□ -2.28
ZNF558Q96NG5 Y_RNA.82-201ENST00000363000 102 ntBASIC0.79□□□□□ -2.28
ZNF558Q96NG5 Y_RNA.92-201ENST00000363043 102 ntBASIC0.79□□□□□ -2.28
ZNF558Q96NG5 RNA5SP325-201ENST00000363756 130 ntBASIC0.79□□□□□ -2.28
ZNF558Q96NG5 Y_RNA.235-201ENST00000364412 102 ntBASIC0.79□□□□□ -2.28
ZNF558Q96NG5 Y_RNA.237-201ENST00000364439 102 ntBASIC0.79□□□□□ -2.28
ZNF558Q96NG5 Y_RNA.306-201ENST00000365015 102 ntBASIC0.79□□□□□ -2.28
ZNF558Q96NG5 Y_RNA.312-201ENST00000365089 102 ntBASIC0.79□□□□□ -2.28
ZNF558Q96NG5 Y_RNA.322-201ENST00000365151 102 ntBASIC0.79□□□□□ -2.28
ZNF558Q96NG5 RNU6-1335P-201ENST00000365426 107 ntBASIC0.79□□□□□ -2.28
ZNF558Q96NG5 Y_RNA.376-201ENST00000365638 108 ntBASIC0.79□□□□□ -2.28
ZNF558Q96NG5 Y_RNA.518-201ENST00000384552 113 ntBASIC0.79□□□□□ -2.28
ZNF558Q96NG5 SNORA2B-201ENST00000384583 137 ntBASIC0.79□□□□□ -2.28
ZNF558Q96NG5 RNU6-713P-201ENST00000384761 107 ntBASIC0.79□□□□□ -2.28
ZNF558Q96NG5 MIR548A2-201ENST00000384956 97 ntBASIC0.79□□□□□ -2.28
ZNF558Q96NG5 MIR518F-201ENST00000384973 87 ntBASIC0.79□□□□□ -2.28
ZNF558Q96NG5 RNU2-55P-201ENST00000411146 174 ntBASIC0.79□□□□□ -2.28
ZNF558Q96NG5 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.79□□□□□ -2.28
ZNF558Q96NG5 Y_RNA.650-201ENST00000459002 102 ntBASIC0.79□□□□□ -2.28
ZNF558Q96NG5 PSMC1P5-201ENST00000512850 177 ntBASIC0.79□□□□□ -2.28
ZNF558Q96NG5 Y_RNA.777-201ENST00000516982 102 ntBASIC0.79□□□□□ -2.28
ZNF558Q96NG5 Y_RNA.771-201ENST00000598668 102 ntBASIC0.79□□□□□ -2.28
ZNF558Q96NG5 AL136317.1-201ENST00000612653 226 ntBASIC0.79□□□□□ -2.28
ZNF558Q96NG5 U2.14-201ENST00000615943 113 ntBASIC0.79□□□□□ -2.28
ZNF558Q96NG5 Y_RNA.789-201ENST00000622480 102 ntBASIC0.79□□□□□ -2.28
ZNF558Q96NG5 RNU6-888P-201ENST00000363010 101 ntBASIC0.78□□□□□ -2.28
ZNF558Q96NG5 Y_RNA.117-201ENST00000363294 101 ntBASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 200.6 ms