Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.85□□□□□ -2.27
SNRNP40Q96DI7 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.85□□□□□ -2.27
SNRNP40Q96DI7 AC067940.1-201ENST00000458411 300 ntBASIC0.85□□□□□ -2.27
SNRNP40Q96DI7 Y_RNA.650-201ENST00000459002 102 ntBASIC0.85□□□□□ -2.27
SNRNP40Q96DI7 Y_RNA.777-201ENST00000516982 102 ntBASIC0.85□□□□□ -2.27
SNRNP40Q96DI7 AL117187.1-201ENST00000555482 181 ntBASIC0.85□□□□□ -2.27
SNRNP40Q96DI7 Y_RNA.771-201ENST00000598668 102 ntBASIC0.85□□□□□ -2.27
SNRNP40Q96DI7 Y_RNA.802-201ENST00000614892 130 ntBASIC0.85□□□□□ -2.27
SNRNP40Q96DI7 Y_RNA.789-201ENST00000622480 102 ntBASIC0.85□□□□□ -2.27
SNRNP40Q96DI7 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.84□□□□□ -2.27
SNRNP40Q96DI7 RNU6-740P-201ENST00000364734 105 ntBASIC0.84□□□□□ -2.27
SNRNP40Q96DI7 Y_RNA.483-201ENST00000384380 101 ntBASIC0.84□□□□□ -2.27
SNRNP40Q96DI7 MIR1302-7-201ENST00000408841 72 ntBASIC0.84□□□□□ -2.27
SNRNP40Q96DI7 RNU6-994P-201ENST00000410507 111 ntBASIC0.84□□□□□ -2.27
SNRNP40Q96DI7 AL392103.1-201ENST00000447000 198 ntBASIC0.84□□□□□ -2.27
SNRNP40Q96DI7 RNU2-13P-201ENST00000515909 113 ntBASIC0.84□□□□□ -2.27
SNRNP40Q96DI7 AC100767.1-201ENST00000528178 123 ntBASIC0.84□□□□□ -2.27
SNRNP40Q96DI7 MIR4698-201ENST00000577795 80 ntBASIC0.84□□□□□ -2.27
SNRNP40Q96DI7 AL049861.1-201ENST00000603130 150 ntBASIC0.84□□□□□ -2.27
SNRNP40Q96DI7 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.84□□□□□ -2.27
SNRNP40Q96DI7 AC015726.2-201ENST00000620112 122 ntBASIC0.84□□□□□ -2.27
SNRNP40Q96DI7 Y_RNA.117-201ENST00000363294 101 ntBASIC0.83□□□□□ -2.28
SNRNP40Q96DI7 Y_RNA.370-201ENST00000365589 108 ntBASIC0.83□□□□□ -2.28
SNRNP40Q96DI7 Y_RNA.461-201ENST00000384263 103 ntBASIC0.83□□□□□ -2.28
SNRNP40Q96DI7 SNORA8.3-201ENST00000384679 139 ntBASIC0.83□□□□□ -2.28
SNRNP40Q96DI7 RNU7-181P-201ENST00000517234 74 ntBASIC0.83□□□□□ -2.28
SNRNP40Q96DI7 AC109810.1-201ENST00000534066 224 ntBASIC0.83□□□□□ -2.28
SNRNP40Q96DI7 MIR4662B-201ENST00000579498 81 ntBASIC0.83□□□□□ -2.28
SNRNP40Q96DI7 MIR4282-201ENST00000583613 67 ntBASIC0.83□□□□□ -2.28
SNRNP40Q96DI7 AC131055.1-201ENST00000584626 316 ntBASIC0.83□□□□□ -2.28
SNRNP40Q96DI7 AC103810.9-201ENST00000606688 112 ntBASIC0.83□□□□□ -2.28
SNRNP40Q96DI7 U6.104-201ENST00000637979 90 ntBASIC0.83□□□□□ -2.28
SNRNP40Q96DI7 Y_RNA.547-201ENST00000384654 119 ntBASIC0.82□□□□□ -2.28
SNRNP40Q96DI7 Y_RNA.572-201ENST00000384757 98 ntBASIC0.82□□□□□ -2.28
SNRNP40Q96DI7 MIR608-201ENST00000384820 100 ntBASIC0.82□□□□□ -2.28
SNRNP40Q96DI7 MIR626-201ENST00000385032 94 ntBASIC0.82□□□□□ -2.28
SNRNP40Q96DI7 MIR1302-6-201ENST00000408466 90 ntBASIC0.82□□□□□ -2.28
SNRNP40Q96DI7 MIR548O-201ENST00000408583 114 ntBASIC0.82□□□□□ -2.28
SNRNP40Q96DI7 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.82□□□□□ -2.28
SNRNP40Q96DI7 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.82□□□□□ -2.28
SNRNP40Q96DI7 RNA5SP255-201ENST00000516370 107 ntBASIC0.82□□□□□ -2.28
SNRNP40Q96DI7 RNU7-25P-201ENST00000516544 62 ntBASIC0.82□□□□□ -2.28
SNRNP40Q96DI7 RNU6-197P-201ENST00000516680 100 ntBASIC0.82□□□□□ -2.28
SNRNP40Q96DI7 RNU11-2P-201ENST00000516898 142 ntBASIC0.82□□□□□ -2.28
SNRNP40Q96DI7 AC006006.1-201ENST00000603082 144 ntBASIC0.82□□□□□ -2.28
SNRNP40Q96DI7 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.81□□□□□ -2.28
SNRNP40Q96DI7 Y_RNA.176-201ENST00000363815 109 ntBASIC0.81□□□□□ -2.28
SNRNP40Q96DI7 Y_RNA.229-201ENST00000364347 113 ntBASIC0.81□□□□□ -2.28
SNRNP40Q96DI7 SNORA1.2-201ENST00000365189 134 ntBASIC0.81□□□□□ -2.28
SNRNP40Q96DI7 Y_RNA.537-201ENST00000384626 109 ntBASIC0.81□□□□□ -2.28
SNRNP40Q96DI7 Y_RNA.587-201ENST00000391210 103 ntBASIC0.81□□□□□ -2.28
SNRNP40Q96DI7 AL358176.2-201ENST00000425769 204 ntBASIC0.81□□□□□ -2.28
SNRNP40Q96DI7 PSMC1P5-201ENST00000512850 177 ntBASIC0.81□□□□□ -2.28
SNRNP40Q96DI7 SCARNA8-201ENST00000515924 131 ntBASIC0.81□□□□□ -2.28
SNRNP40Q96DI7 RNU6-126P-201ENST00000516685 103 ntBASIC0.81□□□□□ -2.28
SNRNP40Q96DI7 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.81□□□□□ -2.28
SNRNP40Q96DI7 AC012433.1-201ENST00000588916 398 ntBASIC0.81□□□□□ -2.28
SNRNP40Q96DI7 AC008737.2-201ENST00000599446 118 ntBASIC0.81□□□□□ -2.28
SNRNP40Q96DI7 SNORD24-201ENST00000383884 75 ntBASIC0.8□□□□□ -2.28
SNRNP40Q96DI7 Y_RNA.486-201ENST00000384398 107 ntBASIC0.8□□□□□ -2.28
SNRNP40Q96DI7 SNORA51.10-201ENST00000384418 136 ntBASIC0.8□□□□□ -2.28
SNRNP40Q96DI7 SNORD89-201ENST00000390981 114 ntBASIC0.8□□□□□ -2.28
SNRNP40Q96DI7 RNU6-651P-201ENST00000411040 105 ntBASIC0.8□□□□□ -2.28
SNRNP40Q96DI7 AC007751.1-201ENST00000529260 376 ntBASIC0.8□□□□□ -2.28
SNRNP40Q96DI7 MIR4714-201ENST00000580728 77 ntBASIC0.8□□□□□ -2.28
SNRNP40Q96DI7 AL136317.1-201ENST00000612653 226 ntBASIC0.8□□□□□ -2.28
SNRNP40Q96DI7 Y_RNA.24-201ENST00000362508 103 ntBASIC0.79□□□□□ -2.28
SNRNP40Q96DI7 RNU6-1187P-201ENST00000364771 110 ntBASIC0.79□□□□□ -2.28
SNRNP40Q96DI7 Y_RNA.304-201ENST00000365011 112 ntBASIC0.79□□□□□ -2.28
SNRNP40Q96DI7 Y_RNA.396-201ENST00000383949 103 ntBASIC0.79□□□□□ -2.28
SNRNP40Q96DI7 SNORA24-201ENST00000384096 131 ntBASIC0.79□□□□□ -2.28
SNRNP40Q96DI7 MIR548A2-201ENST00000384956 97 ntBASIC0.79□□□□□ -2.28
SNRNP40Q96DI7 SNORD111-201ENST00000408139 94 ntBASIC0.79□□□□□ -2.28
SNRNP40Q96DI7 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.79□□□□□ -2.28
SNRNP40Q96DI7 Y_RNA.666-201ENST00000516187 112 ntBASIC0.79□□□□□ -2.28
SNRNP40Q96DI7 AL360085.1-201ENST00000604713 532 ntBASIC0.79□□□□□ -2.28
SNRNP40Q96DI7 Y_RNA.352-201ENST00000365439 102 ntBASIC0.78□□□□□ -2.28
SNRNP40Q96DI7 RNU6-484P-201ENST00000384016 107 ntBASIC0.78□□□□□ -2.28
SNRNP40Q96DI7 RNY3P5-201ENST00000384127 102 ntBASIC0.78□□□□□ -2.28
SNRNP40Q96DI7 MIR518F-201ENST00000384973 87 ntBASIC0.78□□□□□ -2.28
SNRNP40Q96DI7 RNU6-847P-201ENST00000411115 108 ntBASIC0.78□□□□□ -2.28
SNRNP40Q96DI7 RNU2-55P-201ENST00000411146 174 ntBASIC0.78□□□□□ -2.28
SNRNP40Q96DI7 U7.7-201ENST00000459276 60 ntBASIC0.78□□□□□ -2.28
SNRNP40Q96DI7 MIR2115-201ENST00000516657 100 ntBASIC0.78□□□□□ -2.28
SNRNP40Q96DI7 AC025627.3-201ENST00000582078 182 ntBASIC0.78□□□□□ -2.28
SNRNP40Q96DI7 MIR4719-201ENST00000585233 84 ntBASIC0.78□□□□□ -2.28
SNRNP40Q96DI7 MIR4791-201ENST00000607666 84 ntBASIC0.78□□□□□ -2.28
SNRNP40Q96DI7 AC108706.1-201ENST00000611053 297 ntBASIC0.78□□□□□ -2.28
SNRNP40Q96DI7 AC106800.4-201ENST00000614905 153 ntBASIC0.78□□□□□ -2.28
SNRNP40Q96DI7 7SK.10-201ENST00000621414 298 ntBASIC0.78□□□□□ -2.28
SNRNP40Q96DI7 MIR6516-201ENST00000630554 81 ntBASIC0.78□□□□□ -2.28
SNRNP40Q96DI7 SNORD115-34-201ENST00000362441 82 ntBASIC0.77□□□□□ -2.29
SNRNP40Q96DI7 SNORD115-12-201ENST00000362583 82 ntBASIC0.77□□□□□ -2.29
SNRNP40Q96DI7 Y_RNA.47-201ENST00000362697 108 ntBASIC0.77□□□□□ -2.29
SNRNP40Q96DI7 SNORD115-29-201ENST00000362834 82 ntBASIC0.77□□□□□ -2.29
SNRNP40Q96DI7 SNORD115-9-201ENST00000362912 82 ntBASIC0.77□□□□□ -2.29
SNRNP40Q96DI7 SNORD115-21-201ENST00000362963 81 ntBASIC0.77□□□□□ -2.29
SNRNP40Q96DI7 RNU6-888P-201ENST00000363010 101 ntBASIC0.77□□□□□ -2.29
SNRNP40Q96DI7 SNORD115-14-201ENST00000363090 81 ntBASIC0.77□□□□□ -2.29
SNRNP40Q96DI7 SNORD115-13-201ENST00000363358 82 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 190.6 ms