Protein–RNA interactions for Protein: Q92890

UFD1, Ubiquitin recognition factor in ER-associated degradation protein 1, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1Q92890 AC124312.5-201ENST00000604451 268 ntBASIC0.27□□□□□ -2.37
UFD1Q92890 MIR8055-201ENST00000610739 97 ntBASIC0.27□□□□□ -2.37
UFD1Q92890 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.27□□□□□ -2.37
UFD1Q92890 Z97988.1-201ENST00000637697 135 ntBASIC0.27□□□□□ -2.37
UFD1Q92890 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.27□□□□□ -2.37
UFD1Q92890 AC090625.1-201ENST00000357130 210 ntBASIC0.26□□□□□ -2.37
UFD1Q92890 RNU6-1272P-201ENST00000362776 107 ntBASIC0.26□□□□□ -2.37
UFD1Q92890 RNU4-73P-201ENST00000363164 141 ntBASIC0.26□□□□□ -2.37
UFD1Q92890 Y_RNA.395-201ENST00000383945 109 ntBASIC0.26□□□□□ -2.37
UFD1Q92890 Y_RNA.486-201ENST00000384398 107 ntBASIC0.26□□□□□ -2.37
UFD1Q92890 MIR216A-201ENST00000385063 110 ntBASIC0.26□□□□□ -2.37
UFD1Q92890 MTND4P19-201ENST00000446659 478 ntBASIC0.26□□□□□ -2.37
UFD1Q92890 AC002350.1-201ENST00000490759 375 ntBASIC0.26□□□□□ -2.37
UFD1Q92890 RNA5SP134-201ENST00000516492 96 ntBASIC0.26□□□□□ -2.37
UFD1Q92890 RNU7-53P-201ENST00000516705 60 ntBASIC0.26□□□□□ -2.37
UFD1Q92890 RNU6-1223P-201ENST00000517124 104 ntBASIC0.26□□□□□ -2.37
UFD1Q92890 RNU6-897P-201ENST00000517135 105 ntBASIC0.26□□□□□ -2.37
UFD1Q92890 RAC1P9-201ENST00000604990 392 ntBASIC0.26□□□□□ -2.37
UFD1Q92890 AL133255.1-201ENST00000606374 441 ntBASIC0.26□□□□□ -2.37
UFD1Q92890 AC243829.3-201ENST00000622177 108 ntBASIC0.26□□□□□ -2.37
UFD1Q92890 Y_RNA.37-201ENST00000362606 108 ntBASIC0.25□□□□□ -2.37
UFD1Q92890 SNORA27-201ENST00000384323 126 ntBASIC0.25□□□□□ -2.37
UFD1Q92890 MIR588-201ENST00000384900 83 ntBASIC0.25□□□□□ -2.37
UFD1Q92890 MIR518F-201ENST00000384973 87 ntBASIC0.25□□□□□ -2.37
UFD1Q92890 Y_RNA.581-201ENST00000391017 97 ntBASIC0.25□□□□□ -2.37
UFD1Q92890 Y_RNA.645-201ENST00000391229 102 ntBASIC0.25□□□□□ -2.37
UFD1Q92890 SNORD100-201ENST00000408573 76 ntBASIC0.25□□□□□ -2.37
UFD1Q92890 RPS29P24-201ENST00000486345 171 ntBASIC0.25□□□□□ -2.37
UFD1Q92890 RNU6-693P-201ENST00000516134 107 ntBASIC0.25□□□□□ -2.37
UFD1Q92890 MIR548S-201ENST00000581352 82 ntBASIC0.25□□□□□ -2.37
UFD1Q92890 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.25□□□□□ -2.37
UFD1Q92890 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.24□□□□□ -2.37
UFD1Q92890 Y_RNA.293-201ENST00000364908 93 ntBASIC0.24□□□□□ -2.37
UFD1Q92890 RNU6-290P-201ENST00000365212 101 ntBASIC0.24□□□□□ -2.37
UFD1Q92890 MIR548A2-201ENST00000384956 97 ntBASIC0.24□□□□□ -2.37
UFD1Q92890 MIR125B2-201ENST00000385128 89 ntBASIC0.24□□□□□ -2.37
UFD1Q92890 RNU6-679P-201ENST00000391003 106 ntBASIC0.24□□□□□ -2.37
UFD1Q92890 RNU6-823P-201ENST00000391042 103 ntBASIC0.24□□□□□ -2.37
UFD1Q92890 RNU6-1165P-201ENST00000410119 107 ntBASIC0.24□□□□□ -2.37
UFD1Q92890 HMGN1P33-201ENST00000432945 451 ntBASIC0.24□□□□□ -2.37
UFD1Q92890 MTND4LP30-201ENST00000454092 297 ntBASIC0.24□□□□□ -2.37
UFD1Q92890 MTCO2P24-201ENST00000515611 426 ntBASIC0.24□□□□□ -2.37
UFD1Q92890 AC090897.1-201ENST00000580909 226 ntBASIC0.24□□□□□ -2.37
UFD1Q92890 AC008608.1-201ENST00000603910 127 ntBASIC0.24□□□□□ -2.37
UFD1Q92890 AC090971.5-201ENST00000621102 293 ntBASIC0.24□□□□□ -2.37
UFD1Q92890 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.23□□□□□ -2.37
UFD1Q92890 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.23□□□□□ -2.37
UFD1Q92890 RNU6-1327P-201ENST00000365302 105 ntBASIC0.23□□□□□ -2.37
UFD1Q92890 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.23□□□□□ -2.37
UFD1Q92890 SNORD24-201ENST00000383884 75 ntBASIC0.23□□□□□ -2.37
UFD1Q92890 RNU6-364P-201ENST00000384387 107 ntBASIC0.23□□□□□ -2.37
UFD1Q92890 MIR1257-201ENST00000408490 117 ntBASIC0.23□□□□□ -2.37
UFD1Q92890 RNU6-602P-201ENST00000411155 105 ntBASIC0.23□□□□□ -2.37
UFD1Q92890 PMCHL1-202ENST00000423102 261 ntBASIC0.23□□□□□ -2.37
UFD1Q92890 RNU7-102P-201ENST00000458948 62 ntBASIC0.23□□□□□ -2.37
UFD1Q92890 snoU13.2-201ENST00000459201 104 ntBASIC0.23□□□□□ -2.37
UFD1Q92890 RNU6-1132P-201ENST00000459214 107 ntBASIC0.23□□□□□ -2.37
UFD1Q92890 RNU7-185P-201ENST00000459215 60 ntBASIC0.23□□□□□ -2.37
UFD1Q92890 SNORD36C-201ENST00000516733 66 ntBASIC0.23□□□□□ -2.37
UFD1Q92890 RNU2-31P-201ENST00000516954 155 ntBASIC0.23□□□□□ -2.37
UFD1Q92890 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.23□□□□□ -2.37
UFD1Q92890 MIR5093-201ENST00000583199 100 ntBASIC0.23□□□□□ -2.37
UFD1Q92890 AC243829.6-201ENST00000612652 106 ntBASIC0.23□□□□□ -2.37
UFD1Q92890 MIR6513-201ENST00000621188 64 ntBASIC0.23□□□□□ -2.37
UFD1Q92890 MIR369-201ENST00000362155 70 ntBASIC0.22□□□□□ -2.37
UFD1Q92890 SNORA25.1-201ENST00000362326 128 ntBASIC0.22□□□□□ -2.37
UFD1Q92890 Y_RNA.105-201ENST00000363182 111 ntBASIC0.22□□□□□ -2.37
UFD1Q92890 RNU6-450P-201ENST00000364654 107 ntBASIC0.22□□□□□ -2.37
UFD1Q92890 SNORA1.1-201ENST00000364671 133 ntBASIC0.22□□□□□ -2.37
UFD1Q92890 RNA5SP517-201ENST00000364724 117 ntBASIC0.22□□□□□ -2.37
UFD1Q92890 RNU6-42P-201ENST00000384165 107 ntBASIC0.22□□□□□ -2.37
UFD1Q92890 SNORD61-201ENST00000384252 73 ntBASIC0.22□□□□□ -2.37
UFD1Q92890 MIR518A1-201ENST00000385068 85 ntBASIC0.22□□□□□ -2.37
UFD1Q92890 MIR526A2-201ENST00000390198 65 ntBASIC0.22□□□□□ -2.37
UFD1Q92890 RNU6-1319P-201ENST00000390855 104 ntBASIC0.22□□□□□ -2.37
UFD1Q92890 RNU6-747P-201ENST00000390928 104 ntBASIC0.22□□□□□ -2.37
UFD1Q92890 RNU6-241P-201ENST00000391148 104 ntBASIC0.22□□□□□ -2.37
UFD1Q92890 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.22□□□□□ -2.37
UFD1Q92890 MIR1252-201ENST00000408861 65 ntBASIC0.22□□□□□ -2.37
UFD1Q92890 RNU6-447P-201ENST00000410293 104 ntBASIC0.22□□□□□ -2.37
UFD1Q92890 RNU6-1118P-201ENST00000410382 104 ntBASIC0.22□□□□□ -2.37
UFD1Q92890 RNU6-1076P-201ENST00000410397 104 ntBASIC0.22□□□□□ -2.37
UFD1Q92890 RNU6-355P-201ENST00000410427 104 ntBASIC0.22□□□□□ -2.37
UFD1Q92890 RNU6-791P-201ENST00000410467 104 ntBASIC0.22□□□□□ -2.37
UFD1Q92890 RNU6-121P-201ENST00000410525 99 ntBASIC0.22□□□□□ -2.37
UFD1Q92890 RNU6-705P-201ENST00000410601 104 ntBASIC0.22□□□□□ -2.37
UFD1Q92890 RNU6-1100P-201ENST00000410691 104 ntBASIC0.22□□□□□ -2.37
UFD1Q92890 RNU6-860P-201ENST00000410860 104 ntBASIC0.22□□□□□ -2.37
UFD1Q92890 RNU6-1217P-201ENST00000411276 104 ntBASIC0.22□□□□□ -2.37
UFD1Q92890 RNU6-785P-201ENST00000411324 104 ntBASIC0.22□□□□□ -2.37
UFD1Q92890 AC108740.1-201ENST00000498629 225 ntBASIC0.22□□□□□ -2.37
UFD1Q92890 SNORA25.12-201ENST00000516202 82 ntBASIC0.22□□□□□ -2.37
UFD1Q92890 Y_RNA.676-201ENST00000516393 96 ntBASIC0.22□□□□□ -2.37
UFD1Q92890 RNU6-126P-201ENST00000516685 103 ntBASIC0.22□□□□□ -2.37
UFD1Q92890 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.22□□□□□ -2.37
UFD1Q92890 U6.90-201ENST00000614007 104 ntBASIC0.22□□□□□ -2.37
UFD1Q92890 U6.70-201ENST00000620287 104 ntBASIC0.22□□□□□ -2.37
UFD1Q92890 MIR103A1-201ENST00000362165 78 ntBASIC0.21□□□□□ -2.38
UFD1Q92890 RNU6-1309P-201ENST00000363305 108 ntBASIC0.21□□□□□ -2.38
UFD1Q92890 RNU6-326P-201ENST00000365480 107 ntBASIC0.21□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 194.1 ms