Protein–RNA interactions for Protein: Q8IX90

SKA3, Spindle and kinetochore-associated protein 3, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3Q8IX90 SNORD115-12-201ENST00000362583 82 ntBASIC0.57□□□□□ -2.32
SKA3Q8IX90 SNORD115-29-201ENST00000362834 82 ntBASIC0.57□□□□□ -2.32
SKA3Q8IX90 SNORD115-9-201ENST00000362912 82 ntBASIC0.57□□□□□ -2.32
SKA3Q8IX90 SNORD115-21-201ENST00000362963 81 ntBASIC0.57□□□□□ -2.32
SKA3Q8IX90 SNORD115-14-201ENST00000363090 81 ntBASIC0.57□□□□□ -2.32
SKA3Q8IX90 Y_RNA.117-201ENST00000363294 101 ntBASIC0.57□□□□□ -2.32
SKA3Q8IX90 SNORD115-13-201ENST00000363358 82 ntBASIC0.57□□□□□ -2.32
SKA3Q8IX90 SNORD115-41-201ENST00000363608 82 ntBASIC0.57□□□□□ -2.32
SKA3Q8IX90 SNORD115-11-201ENST00000363616 82 ntBASIC0.57□□□□□ -2.32
SKA3Q8IX90 SNORD115-5-201ENST00000363633 82 ntBASIC0.57□□□□□ -2.32
SKA3Q8IX90 SNORD115-39-201ENST00000363694 82 ntBASIC0.57□□□□□ -2.32
SKA3Q8IX90 SNORD115-4-201ENST00000363810 82 ntBASIC0.57□□□□□ -2.32
SKA3Q8IX90 SNORD45.3-201ENST00000363836 72 ntBASIC0.57□□□□□ -2.32
SKA3Q8IX90 SNORD115-16-201ENST00000363887 82 ntBASIC0.57□□□□□ -2.32
SKA3Q8IX90 SNORD115-28-201ENST00000363931 81 ntBASIC0.57□□□□□ -2.32
SKA3Q8IX90 SNORD115-6-201ENST00000363942 82 ntBASIC0.57□□□□□ -2.32
SKA3Q8IX90 SNORD115-42-201ENST00000364273 82 ntBASIC0.57□□□□□ -2.32
SKA3Q8IX90 Y_RNA.229-201ENST00000364347 113 ntBASIC0.57□□□□□ -2.32
SKA3Q8IX90 Y_RNA.238-201ENST00000364441 102 ntBASIC0.57□□□□□ -2.32
SKA3Q8IX90 SNORD115-15-201ENST00000364809 81 ntBASIC0.57□□□□□ -2.32
SKA3Q8IX90 SNORD115-1-201ENST00000364961 82 ntBASIC0.57□□□□□ -2.32
SKA3Q8IX90 SNORD115-26-201ENST00000365067 82 ntBASIC0.57□□□□□ -2.32
SKA3Q8IX90 SNORD115-10-201ENST00000365073 81 ntBASIC0.57□□□□□ -2.32
SKA3Q8IX90 SNORD115-43-201ENST00000365503 82 ntBASIC0.57□□□□□ -2.32
SKA3Q8IX90 SNORD115-36-201ENST00000365629 82 ntBASIC0.57□□□□□ -2.32
SKA3Q8IX90 Y_RNA.376-201ENST00000365638 108 ntBASIC0.57□□□□□ -2.32
SKA3Q8IX90 SNORA24-201ENST00000384096 131 ntBASIC0.57□□□□□ -2.32
SKA3Q8IX90 Y_RNA.572-201ENST00000384757 98 ntBASIC0.57□□□□□ -2.32
SKA3Q8IX90 MIR548A2-201ENST00000384956 97 ntBASIC0.57□□□□□ -2.32
SKA3Q8IX90 MIR518F-201ENST00000384973 87 ntBASIC0.57□□□□□ -2.32
SKA3Q8IX90 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.57□□□□□ -2.32
SKA3Q8IX90 RNU6-733P-201ENST00000410759 104 ntBASIC0.57□□□□□ -2.32
SKA3Q8IX90 snoU13.16-201ENST00000459350 104 ntBASIC0.57□□□□□ -2.32
SKA3Q8IX90 AC107297.1-201ENST00000459991 176 ntBASIC0.57□□□□□ -2.32
SKA3Q8IX90 TRBVB-201ENST00000477100 408 ntBASIC0.57□□□□□ -2.32
SKA3Q8IX90 AC100767.1-201ENST00000528178 123 ntBASIC0.57□□□□□ -2.32
SKA3Q8IX90 AC025627.3-201ENST00000582078 182 ntBASIC0.57□□□□□ -2.32
SKA3Q8IX90 MIR4264-201ENST00000583520 66 ntBASIC0.57□□□□□ -2.32
SKA3Q8IX90 AP000753.3-201ENST00000604083 169 ntBASIC0.57□□□□□ -2.32
SKA3Q8IX90 AP000942.4-201ENST00000604811 241 ntBASIC0.57□□□□□ -2.32
SKA3Q8IX90 SNORD115-40-201ENST00000606510 82 ntBASIC0.57□□□□□ -2.32
SKA3Q8IX90 MIR6788-201ENST00000618842 66 ntBASIC0.57□□□□□ -2.32
SKA3Q8IX90 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.57□□□□□ -2.32
SKA3Q8IX90 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.56□□□□□ -2.32
SKA3Q8IX90 Y_RNA.44-201ENST00000362676 108 ntBASIC0.56□□□□□ -2.32
SKA3Q8IX90 Y_RNA.224-201ENST00000364308 111 ntBASIC0.56□□□□□ -2.32
SKA3Q8IX90 Y_RNA.494-201ENST00000384432 111 ntBASIC0.56□□□□□ -2.32
SKA3Q8IX90 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.56□□□□□ -2.32
SKA3Q8IX90 RNU7-67P-201ENST00000459003 62 ntBASIC0.56□□□□□ -2.32
SKA3Q8IX90 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.56□□□□□ -2.32
SKA3Q8IX90 RNU6-126P-201ENST00000516685 103 ntBASIC0.56□□□□□ -2.32
SKA3Q8IX90 RNU6-1270P-201ENST00000517128 108 ntBASIC0.56□□□□□ -2.32
SKA3Q8IX90 AC004812.1-201ENST00000540773 146 ntBASIC0.56□□□□□ -2.32
SKA3Q8IX90 AP001282.2-201ENST00000616149 309 ntBASIC0.56□□□□□ -2.32
SKA3Q8IX90 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.55□□□□□ -2.32
SKA3Q8IX90 Y_RNA.24-201ENST00000362508 103 ntBASIC0.55□□□□□ -2.32
SKA3Q8IX90 Y_RNA.37-201ENST00000362606 108 ntBASIC0.55□□□□□ -2.32
SKA3Q8IX90 Y_RNA.226-201ENST00000364337 114 ntBASIC0.55□□□□□ -2.32
SKA3Q8IX90 SNORD24-201ENST00000383884 75 ntBASIC0.55□□□□□ -2.32
SKA3Q8IX90 RNU6-1227P-201ENST00000383981 107 ntBASIC0.55□□□□□ -2.32
SKA3Q8IX90 SNORD105-201ENST00000386910 85 ntBASIC0.55□□□□□ -2.32
SKA3Q8IX90 AC087499.4-201ENST00000448505 178 ntBASIC0.55□□□□□ -2.32
SKA3Q8IX90 snoU13.21-201ENST00000459368 105 ntBASIC0.55□□□□□ -2.32
SKA3Q8IX90 RNU6-693P-201ENST00000516134 107 ntBASIC0.55□□□□□ -2.32
SKA3Q8IX90 SNORA18.4-201ENST00000516440 124 ntBASIC0.55□□□□□ -2.32
SKA3Q8IX90 RNU6-365P-201ENST00000517113 106 ntBASIC0.55□□□□□ -2.32
SKA3Q8IX90 MIR5688-201ENST00000580619 83 ntBASIC0.55□□□□□ -2.32
SKA3Q8IX90 MIR4714-201ENST00000580728 77 ntBASIC0.55□□□□□ -2.32
SKA3Q8IX90 U2.14-201ENST00000615943 113 ntBASIC0.55□□□□□ -2.32
SKA3Q8IX90 uc_338.17-201ENST00000619633 179 ntBASIC0.55□□□□□ -2.32
SKA3Q8IX90 MIR1-1-201ENST00000362147 71 ntBASIC0.54□□□□□ -2.32
SKA3Q8IX90 RNU6-888P-201ENST00000363010 101 ntBASIC0.54□□□□□ -2.32
SKA3Q8IX90 Y_RNA.237-201ENST00000364439 102 ntBASIC0.54□□□□□ -2.32
SKA3Q8IX90 RNU6-110P-201ENST00000384508 104 ntBASIC0.54□□□□□ -2.32
SKA3Q8IX90 Y_RNA.512-201ENST00000384518 102 ntBASIC0.54□□□□□ -2.32
SKA3Q8IX90 AC090844.1-201ENST00000422019 156 ntBASIC0.54□□□□□ -2.32
SKA3Q8IX90 COX6CP6-201ENST00000490840 228 ntBASIC0.54□□□□□ -2.32
SKA3Q8IX90 AP003484.1-201ENST00000530974 250 ntBASIC0.54□□□□□ -2.32
SKA3Q8IX90 AC011195.1-201ENST00000578177 177 ntBASIC0.54□□□□□ -2.32
SKA3Q8IX90 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.54□□□□□ -2.32
SKA3Q8IX90 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.53□□□□□ -2.32
SKA3Q8IX90 Y_RNA.66-201ENST00000362862 102 ntBASIC0.53□□□□□ -2.32
SKA3Q8IX90 RNU6-740P-201ENST00000364734 105 ntBASIC0.53□□□□□ -2.32
SKA3Q8IX90 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
SKA3Q8IX90 SNORD61-201ENST00000384252 73 ntBASIC0.53□□□□□ -2.32
SKA3Q8IX90 SNORA27-201ENST00000384323 126 ntBASIC0.53□□□□□ -2.32
SKA3Q8IX90 MIR1287-201ENST00000408492 90 ntBASIC0.53□□□□□ -2.32
SKA3Q8IX90 RNU6-938P-201ENST00000411285 103 ntBASIC0.53□□□□□ -2.32
SKA3Q8IX90 SNORD83.1-201ENST00000411362 77 ntBASIC0.53□□□□□ -2.32
SKA3Q8IX90 AC244098.3-201ENST00000424803 96 ntBASIC0.53□□□□□ -2.32
SKA3Q8IX90 AC015818.7-201ENST00000428754 109 ntBASIC0.53□□□□□ -2.32
SKA3Q8IX90 AC087499.7-201ENST00000441958 109 ntBASIC0.53□□□□□ -2.32
SKA3Q8IX90 SNORD36C-201ENST00000516733 66 ntBASIC0.53□□□□□ -2.32
SKA3Q8IX90 RNU6-958P-201ENST00000516995 106 ntBASIC0.53□□□□□ -2.32
SKA3Q8IX90 MIR151B-201ENST00000584249 96 ntBASIC0.53□□□□□ -2.32
SKA3Q8IX90 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
SKA3Q8IX90 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.53□□□□□ -2.33
SKA3Q8IX90 Y_RNA.11-201ENST00000362375 109 ntBASIC0.52□□□□□ -2.33
SKA3Q8IX90 RNU6-369P-201ENST00000362515 102 ntBASIC0.52□□□□□ -2.33
SKA3Q8IX90 Y_RNA.91-201ENST00000363042 107 ntBASIC0.52□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 220.3 ms