Protein–RNA interactions for Protein: Q6P087

RPUSD3, Mitochondrial mRNA pseudouridine synthase RPUSD3, humanhuman

Known RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3Q6P087 RNU6-383P-201ENST00000410864 94 ntBASIC0.7□□□□□ -2.3
RPUSD3Q6P087 RNA5SP121-201ENST00000516537 101 ntBASIC0.7□□□□□ -2.3
RPUSD3Q6P087 AC131281.1-201ENST00000522984 164 ntBASIC0.7□□□□□ -2.3
RPUSD3Q6P087 MIR6779-201ENST00000617283 64 ntBASIC0.7□□□□□ -2.3
RPUSD3Q6P087 MIR6513-201ENST00000621188 64 ntBASIC0.7□□□□□ -2.3
RPUSD3Q6P087 MIR6835-201ENST00000621552 64 ntBASIC0.7□□□□□ -2.3
RPUSD3Q6P087 MIR6866-201ENST00000638146 69 ntBASIC0.7□□□□□ -2.3
RPUSD3Q6P087 AC068700.1-201ENST00000565862 3754 ntBASIC0.69□□□□□ -2.3
RPUSD3Q6P087 Y_RNA.19-201ENST00000362462 99 ntBASIC0.69□□□□□ -2.3
RPUSD3Q6P087 SNORD115-28-201ENST00000363931 81 ntBASIC0.69□□□□□ -2.3
RPUSD3Q6P087 RNU6-580P-201ENST00000365159 107 ntBASIC0.69□□□□□ -2.3
RPUSD3Q6P087 RNU6-1335P-201ENST00000365426 107 ntBASIC0.69□□□□□ -2.3
RPUSD3Q6P087 RNU6-1132P-201ENST00000459214 107 ntBASIC0.69□□□□□ -2.3
RPUSD3Q6P087 AC091959.1-201ENST00000495857 238 ntBASIC0.69□□□□□ -2.3
RPUSD3Q6P087 SNORD77.4-201ENST00000516158 81 ntBASIC0.69□□□□□ -2.3
RPUSD3Q6P087 AC006006.1-201ENST00000603082 144 ntBASIC0.69□□□□□ -2.3
RPUSD3Q6P087 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.69□□□□□ -2.3
RPUSD3Q6P087 AC134878.1-201ENST00000619901 243 ntBASIC0.69□□□□□ -2.3
RPUSD3Q6P087 AC023934.1-201ENST00000574529 2389 ntBASIC0.68□□□□□ -2.3
RPUSD3Q6P087 SNORA22B-201ENST00000383876 138 ntBASIC0.68□□□□□ -2.3
RPUSD3Q6P087 SNORA24-201ENST00000384096 131 ntBASIC0.68□□□□□ -2.3
RPUSD3Q6P087 MIR216A-201ENST00000385063 110 ntBASIC0.68□□□□□ -2.3
RPUSD3Q6P087 RNA5SP95-201ENST00000410319 137 ntBASIC0.68□□□□□ -2.3
RPUSD3Q6P087 AC113618.1-201ENST00000416747 285 ntBASIC0.68□□□□□ -2.3
RPUSD3Q6P087 AL731563.1-201ENST00000442202 214 ntBASIC0.68□□□□□ -2.3
RPUSD3Q6P087 AC018659.1-201ENST00000551083 169 ntBASIC0.68□□□□□ -2.3
RPUSD3Q6P087 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.68□□□□□ -2.3
RPUSD3Q6P087 AC011195.1-201ENST00000578177 177 ntBASIC0.68□□□□□ -2.3
RPUSD3Q6P087 RNU5E-4P-201ENST00000364931 120 ntBASIC0.67□□□□□ -2.3
RPUSD3Q6P087 SNORA40.5-201ENST00000391061 128 ntBASIC0.67□□□□□ -2.3
RPUSD3Q6P087 RNU7-53P-201ENST00000516705 60 ntBASIC0.67□□□□□ -2.3
RPUSD3Q6P087 RNU6-365P-201ENST00000517113 106 ntBASIC0.67□□□□□ -2.3
RPUSD3Q6P087 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.67□□□□□ -2.3
RPUSD3Q6P087 Y_RNA.210-201ENST00000364161 110 ntBASIC0.66□□□□□ -2.3
RPUSD3Q6P087 Y_RNA.214-201ENST00000364201 112 ntBASIC0.66□□□□□ -2.3
RPUSD3Q6P087 RNU6-867P-201ENST00000364956 107 ntBASIC0.66□□□□□ -2.3
RPUSD3Q6P087 RNU6-934P-201ENST00000365154 107 ntBASIC0.66□□□□□ -2.3
RPUSD3Q6P087 SNORD24-201ENST00000383884 75 ntBASIC0.66□□□□□ -2.3
RPUSD3Q6P087 Y_RNA.394-201ENST00000383942 103 ntBASIC0.66□□□□□ -2.3
RPUSD3Q6P087 Y_RNA.541-201ENST00000384640 113 ntBASIC0.66□□□□□ -2.3
RPUSD3Q6P087 SNORA8.3-201ENST00000384679 139 ntBASIC0.66□□□□□ -2.3
RPUSD3Q6P087 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.66□□□□□ -2.3
RPUSD3Q6P087 RNU6-121P-201ENST00000410525 99 ntBASIC0.66□□□□□ -2.3
RPUSD3Q6P087 MTCO2P12-201ENST00000427426 682 ntBASIC0.66□□□□□ -2.3
RPUSD3Q6P087 Y_RNA.666-201ENST00000516187 112 ntBASIC0.66□□□□□ -2.3
RPUSD3Q6P087 RNU6-977P-201ENST00000516411 103 ntBASIC0.66□□□□□ -2.3
RPUSD3Q6P087 Y_RNA.711-201ENST00000516993 102 ntBASIC0.66□□□□□ -2.3
RPUSD3Q6P087 AL590095.2-201ENST00000604136 117 ntBASIC0.66□□□□□ -2.3
RPUSD3Q6P087 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.66□□□□□ -2.3
RPUSD3Q6P087 UBE2WP1-201ENST00000362030 340 ntBASIC0.65□□□□□ -2.31
RPUSD3Q6P087 Y_RNA.61-201ENST00000362835 102 ntBASIC0.65□□□□□ -2.31
RPUSD3Q6P087 snoU2_19.2-201ENST00000363024 80 ntBASIC0.65□□□□□ -2.31
RPUSD3Q6P087 Y_RNA.202-201ENST00000364083 110 ntBASIC0.65□□□□□ -2.31
RPUSD3Q6P087 Y_RNA.217-201ENST00000364214 105 ntBASIC0.65□□□□□ -2.31
RPUSD3Q6P087 RNU4-45P-201ENST00000365469 141 ntBASIC0.65□□□□□ -2.31
RPUSD3Q6P087 RNU6-662P-201ENST00000384253 104 ntBASIC0.65□□□□□ -2.31
RPUSD3Q6P087 Y_RNA.535-201ENST00000384612 99 ntBASIC0.65□□□□□ -2.31
RPUSD3Q6P087 SNORD38B-201ENST00000384690 67 ntBASIC0.65□□□□□ -2.31
RPUSD3Q6P087 RNU6-733P-201ENST00000410759 104 ntBASIC0.65□□□□□ -2.31
RPUSD3Q6P087 ELOCP20-201ENST00000422460 345 ntBASIC0.65□□□□□ -2.31
RPUSD3Q6P087 Y_RNA.641-201ENST00000459414 105 ntBASIC0.65□□□□□ -2.31
RPUSD3Q6P087 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.65□□□□□ -2.31
RPUSD3Q6P087 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.65□□□□□ -2.31
RPUSD3Q6P087 MTCO2P24-201ENST00000515611 426 ntBASIC0.65□□□□□ -2.31
RPUSD3Q6P087 AP003733.2-201ENST00000529409 171 ntBASIC0.65□□□□□ -2.31
RPUSD3Q6P087 AC113195.1-201ENST00000579952 141 ntBASIC0.65□□□□□ -2.31
RPUSD3Q6P087 AP000942.4-201ENST00000604811 241 ntBASIC0.65□□□□□ -2.31
RPUSD3Q6P087 SNORD38B-202ENST00000625943 69 ntBASIC0.65□□□□□ -2.31
RPUSD3Q6P087 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.65□□□□□ -2.31
RPUSD3Q6P087 Y_RNA.105-201ENST00000363182 111 ntBASIC0.64□□□□□ -2.31
RPUSD3Q6P087 MIR508-201ENST00000384857 115 ntBASIC0.64□□□□□ -2.31
RPUSD3Q6P087 Y_RNA.587-201ENST00000391210 103 ntBASIC0.64□□□□□ -2.31
RPUSD3Q6P087 MIR936-201ENST00000401264 98 ntBASIC0.64□□□□□ -2.31
RPUSD3Q6P087 RNA5SP222-201ENST00000411039 105 ntBASIC0.64□□□□□ -2.31
RPUSD3Q6P087 AC244098.3-201ENST00000424803 96 ntBASIC0.64□□□□□ -2.31
RPUSD3Q6P087 RNU7-73P-201ENST00000458743 63 ntBASIC0.64□□□□□ -2.31
RPUSD3Q6P087 RNU6-693P-201ENST00000516134 107 ntBASIC0.64□□□□□ -2.31
RPUSD3Q6P087 RNU6-504P-201ENST00000516568 104 ntBASIC0.64□□□□□ -2.31
RPUSD3Q6P087 RNU6-958P-201ENST00000516995 106 ntBASIC0.64□□□□□ -2.31
RPUSD3Q6P087 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.64□□□□□ -2.31
RPUSD3Q6P087 DEFB108E-201ENST00000524692 240 ntBASIC0.64□□□□□ -2.31
RPUSD3Q6P087 AC100767.1-201ENST00000528178 123 ntBASIC0.64□□□□□ -2.31
RPUSD3Q6P087 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
RPUSD3Q6P087 RNU6-205P-201ENST00000390858 107 ntBASIC0.63□□□□□ -2.31
RPUSD3Q6P087 RNU2-55P-201ENST00000411146 174 ntBASIC0.63□□□□□ -2.31
RPUSD3Q6P087 SERF1AP1-201ENST00000514575 187 ntBASIC0.63□□□□□ -2.31
RPUSD3Q6P087 RNU4-54P-201ENST00000516428 129 ntBASIC0.63□□□□□ -2.31
RPUSD3Q6P087 AP003484.1-201ENST00000530974 250 ntBASIC0.63□□□□□ -2.31
RPUSD3Q6P087 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.63□□□□□ -2.31
RPUSD3Q6P087 snoU18.1-201ENST00000629629 71 ntBASIC0.63□□□□□ -2.31
RPUSD3Q6P087 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.63□□□□□ -2.31
RPUSD3Q6P087 MTND4P29-201ENST00000503122 1372 ntBASIC0.62□□□□□ -2.31
RPUSD3Q6P087 Y_RNA.205-201ENST00000364128 113 ntBASIC0.62□□□□□ -2.31
RPUSD3Q6P087 SNORA27-201ENST00000384323 126 ntBASIC0.62□□□□□ -2.31
RPUSD3Q6P087 Y_RNA.486-201ENST00000384398 107 ntBASIC0.62□□□□□ -2.31
RPUSD3Q6P087 RNU6-125P-201ENST00000384505 107 ntBASIC0.62□□□□□ -2.31
RPUSD3Q6P087 Y_RNA.527-201ENST00000384573 102 ntBASIC0.62□□□□□ -2.31
RPUSD3Q6P087 RNY1P4-201ENST00000384595 115 ntBASIC0.62□□□□□ -2.31
RPUSD3Q6P087 MTND5P15-201ENST00000434246 349 ntBASIC0.62□□□□□ -2.31
RPUSD3Q6P087 RNU7-62P-201ENST00000458856 62 ntBASIC0.62□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 217.4 ms