Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 AC008608.1-201ENST00000603910 127 ntBASIC0.16□□□□□ -2.38
CBX1P83916 AL021707.8-201ENST00000609428 183 ntBASIC0.16□□□□□ -2.38
CBX1P83916 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.16□□□□□ -2.38
CBX1P83916 AL589743.1-201ENST00000551932 2712 ntBASIC0.15□□□□□ -2.38
CBX1P83916 Y_RNA.14-201ENST00000362415 103 ntBASIC0.15□□□□□ -2.39
CBX1P83916 Y_RNA.70-201ENST00000362886 110 ntBASIC0.15□□□□□ -2.39
CBX1P83916 RNA5SP62-201ENST00000363457 110 ntBASIC0.15□□□□□ -2.39
CBX1P83916 Y_RNA.354-201ENST00000365448 111 ntBASIC0.15□□□□□ -2.39
CBX1P83916 Y_RNA.418-201ENST00000384029 102 ntBASIC0.15□□□□□ -2.39
CBX1P83916 RNU6-763P-201ENST00000390865 106 ntBASIC0.15□□□□□ -2.39
CBX1P83916 SNORA40.5-201ENST00000391061 128 ntBASIC0.15□□□□□ -2.39
CBX1P83916 RNU6-383P-201ENST00000410864 94 ntBASIC0.15□□□□□ -2.39
CBX1P83916 RNU7-185P-201ENST00000459215 60 ntBASIC0.15□□□□□ -2.39
CBX1P83916 SNORD19B-201ENST00000459623 84 ntBASIC0.15□□□□□ -2.39
CBX1P83916 AC040926.1-201ENST00000530195 238 ntBASIC0.15□□□□□ -2.39
CBX1P83916 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.15□□□□□ -2.39
CBX1P83916 UBE2V2P2-201ENST00000587677 504 ntBASIC0.15□□□□□ -2.39
CBX1P83916 AL049861.1-201ENST00000603130 150 ntBASIC0.15□□□□□ -2.39
CBX1P83916 MIR8055-201ENST00000610739 97 ntBASIC0.15□□□□□ -2.39
CBX1P83916 PART1_1.1-201ENST00000611761 217 ntBASIC0.15□□□□□ -2.39
CBX1P83916 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.15□□□□□ -2.39
CBX1P83916 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.14□□□□□ -2.39
CBX1P83916 Y_RNA.5-201ENST00000362334 102 ntBASIC0.14□□□□□ -2.39
CBX1P83916 RNA5SP193-201ENST00000410353 107 ntBASIC0.14□□□□□ -2.39
CBX1P83916 RNU6-130P-201ENST00000411112 103 ntBASIC0.14□□□□□ -2.39
CBX1P83916 RNU6-764P-201ENST00000516396 105 ntBASIC0.14□□□□□ -2.39
CBX1P83916 RNU7-156P-201ENST00000517214 74 ntBASIC0.14□□□□□ -2.39
CBX1P83916 AC007751.1-201ENST00000529260 376 ntBASIC0.14□□□□□ -2.39
CBX1P83916 SNORD92-201ENST00000585078 85 ntBASIC0.14□□□□□ -2.39
CBX1P83916 SNORA25.18-201ENST00000607153 114 ntBASIC0.14□□□□□ -2.39
CBX1P83916 AC010487.4-201ENST00000637027 61 ntBASIC0.14□□□□□ -2.39
CBX1P83916 SNORA1.1-201ENST00000364671 133 ntBASIC0.13□□□□□ -2.39
CBX1P83916 SNORA27-201ENST00000384323 126 ntBASIC0.13□□□□□ -2.39
CBX1P83916 snoU13.2-201ENST00000459201 104 ntBASIC0.13□□□□□ -2.39
CBX1P83916 MIR4662B-201ENST00000579498 81 ntBASIC0.13□□□□□ -2.39
CBX1P83916 MIR4431-201ENST00000579990 94 ntBASIC0.13□□□□□ -2.39
CBX1P83916 MIR4514-201ENST00000581410 57 ntBASIC0.13□□□□□ -2.39
CBX1P83916 RN7SL793P-201ENST00000583259 296 ntBASIC0.13□□□□□ -2.39
CBX1P83916 C8orf59P2-201ENST00000603441 271 ntBASIC0.13□□□□□ -2.39
CBX1P83916 MIR924-201ENST00000638017 53 ntBASIC0.13□□□□□ -2.39
CBX1P83916 MIR367-201ENST00000362299 68 ntBASIC0.12□□□□□ -2.39
CBX1P83916 Y_RNA.37-201ENST00000362606 108 ntBASIC0.12□□□□□ -2.39
CBX1P83916 Y_RNA.136-201ENST00000363444 102 ntBASIC0.12□□□□□ -2.39
CBX1P83916 SNORD113-8-201ENST00000363497 74 ntBASIC0.12□□□□□ -2.39
CBX1P83916 SNORD118-201ENST00000363593 134 ntBASIC0.12□□□□□ -2.39
CBX1P83916 RNA5SP117-201ENST00000365294 118 ntBASIC0.12□□□□□ -2.39
CBX1P83916 Y_RNA.505-201ENST00000384489 102 ntBASIC0.12□□□□□ -2.39
CBX1P83916 MIR613-201ENST00000385248 95 ntBASIC0.12□□□□□ -2.39
CBX1P83916 RNU2-70P-201ENST00000410718 179 ntBASIC0.12□□□□□ -2.39
CBX1P83916 RNU6-938P-201ENST00000411285 103 ntBASIC0.12□□□□□ -2.39
CBX1P83916 HMGN1P33-201ENST00000432945 451 ntBASIC0.12□□□□□ -2.39
CBX1P83916 RPS29P24-201ENST00000486345 171 ntBASIC0.12□□□□□ -2.39
CBX1P83916 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.12□□□□□ -2.39
CBX1P83916 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.12□□□□□ -2.39
CBX1P83916 AC122108.2-201ENST00000611946 526 ntBASIC0.12□□□□□ -2.39
CBX1P83916 AC013791.1-201ENST00000616619 62 ntBASIC0.12□□□□□ -2.39
CBX1P83916 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.12□□□□□ -2.39
CBX1P83916 RNU6-1309P-201ENST00000363305 108 ntBASIC0.11□□□□□ -2.39
CBX1P83916 SNORA8.2-201ENST00000384372 139 ntBASIC0.11□□□□□ -2.39
CBX1P83916 RNU6-602P-201ENST00000411155 105 ntBASIC0.11□□□□□ -2.39
CBX1P83916 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.11□□□□□ -2.39
CBX1P83916 MRPS35P2-201ENST00000508242 191 ntBASIC0.11□□□□□ -2.39
CBX1P83916 RNU6-693P-201ENST00000516134 107 ntBASIC0.11□□□□□ -2.39
CBX1P83916 SNORD77.4-201ENST00000516158 81 ntBASIC0.11□□□□□ -2.39
CBX1P83916 RNU6-1046P-201ENST00000516538 107 ntBASIC0.11□□□□□ -2.39
CBX1P83916 MIR3678-201ENST00000578455 94 ntBASIC0.11□□□□□ -2.39
CBX1P83916 MIR4724-201ENST00000579485 89 ntBASIC0.11□□□□□ -2.39
CBX1P83916 AC006157.1-201ENST00000611750 366 ntBASIC0.11□□□□□ -2.39
CBX1P83916 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.11□□□□□ -2.39
CBX1P83916 Y_RNA.486-201ENST00000384398 107 ntBASIC0.1□□□□□ -2.39
CBX1P83916 Y_RNA.567-201ENST00000384736 106 ntBASIC0.1□□□□□ -2.39
CBX1P83916 MIR193B-201ENST00000384907 83 ntBASIC0.1□□□□□ -2.39
CBX1P83916 RNA5SP299-201ENST00000391203 116 ntBASIC0.1□□□□□ -2.39
CBX1P83916 Y_RNA.587-201ENST00000391210 103 ntBASIC0.1□□□□□ -2.39
CBX1P83916 Y_RNA.602-201ENST00000410535 92 ntBASIC0.1□□□□□ -2.39
CBX1P83916 AC073261.1-201ENST00000429409 121 ntBASIC0.1□□□□□ -2.39
CBX1P83916 RBMX2P4-201ENST00000441256 376 ntBASIC0.1□□□□□ -2.39
CBX1P83916 FGF7P4-201ENST00000509595 295 ntBASIC0.1□□□□□ -2.39
CBX1P83916 RNU6-863P-201ENST00000515989 104 ntBASIC0.1□□□□□ -2.39
CBX1P83916 RNU6-475P-201ENST00000516073 104 ntBASIC0.1□□□□□ -2.39
CBX1P83916 RNU6-448P-201ENST00000517052 107 ntBASIC0.1□□□□□ -2.39
CBX1P83916 MIR376A1-201ENST00000616574 68 ntBASIC0.1□□□□□ -2.39
CBX1P83916 AC078938.1-201ENST00000620993 318 ntBASIC0.1□□□□□ -2.39
CBX1P83916 Y_RNA.36-201ENST00000362602 112 ntBASIC0.09□□□□□ -2.4
CBX1P83916 Y_RNA.390-201ENST00000383932 102 ntBASIC0.09□□□□□ -2.4
CBX1P83916 Y_RNA.569-201ENST00000384749 103 ntBASIC0.09□□□□□ -2.4
CBX1P83916 MIR563-201ENST00000385080 79 ntBASIC0.09□□□□□ -2.4
CBX1P83916 MT-TF-201ENST00000387314 71 ntBASIC0.09□□□□□ -2.4
CBX1P83916 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.09□□□□□ -2.4
CBX1P83916 Y_RNA.637-201ENST00000459424 114 ntBASIC0.09□□□□□ -2.4
CBX1P83916 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.09□□□□□ -2.4
CBX1P83916 RNU4-90P-201ENST00000362773 141 ntBASIC0.08□□□□□ -2.4
CBX1P83916 Y_RNA.393-201ENST00000383936 102 ntBASIC0.08□□□□□ -2.4
CBX1P83916 RNU6-102P-201ENST00000384485 104 ntBASIC0.08□□□□□ -2.4
CBX1P83916 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC0.08□□□□□ -2.4
CBX1P83916 MIR1295A-201ENST00000408463 79 ntBASIC0.08□□□□□ -2.4
CBX1P83916 HSPE1P25-201ENST00000455484 251 ntBASIC0.08□□□□□ -2.4
CBX1P83916 RNU6-126P-201ENST00000516685 103 ntBASIC0.08□□□□□ -2.4
CBX1P83916 SNORD36C-201ENST00000516733 66 ntBASIC0.08□□□□□ -2.4
CBX1P83916 MIR5692C2-201ENST00000577959 77 ntBASIC0.08□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 184.6 ms