Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 Y_RNA.118-201ENST00000363300 101 ntBASIC0.81□□□□□ -2.28
PDGFRAP16234 Y_RNA.145-201ENST00000363527 102 ntBASIC0.81□□□□□ -2.28
PDGFRAP16234 RNU6-738P-201ENST00000384531 106 ntBASIC0.81□□□□□ -2.28
PDGFRAP16234 Y_RNA.518-201ENST00000384552 113 ntBASIC0.81□□□□□ -2.28
PDGFRAP16234 RNU6-847P-201ENST00000411115 108 ntBASIC0.81□□□□□ -2.28
PDGFRAP16234 AL606490.4-201ENST00000423117 127 ntBASIC0.81□□□□□ -2.28
PDGFRAP16234 SNORD2.1-201ENST00000458762 69 ntBASIC0.81□□□□□ -2.28
PDGFRAP16234 MIR2115-201ENST00000516657 100 ntBASIC0.81□□□□□ -2.28
PDGFRAP16234 AC100767.1-201ENST00000528178 123 ntBASIC0.81□□□□□ -2.28
PDGFRAP16234 AL442663.2-201ENST00000554385 511 ntBASIC0.81□□□□□ -2.28
PDGFRAP16234 AL117187.1-201ENST00000555482 181 ntBASIC0.81□□□□□ -2.28
PDGFRAP16234 AC025627.3-201ENST00000582078 182 ntBASIC0.81□□□□□ -2.28
PDGFRAP16234 AC008737.2-201ENST00000599446 118 ntBASIC0.81□□□□□ -2.28
PDGFRAP16234 AC006006.1-201ENST00000603082 144 ntBASIC0.81□□□□□ -2.28
PDGFRAP16234 AL353765.1-201ENST00000605514 183 ntBASIC0.81□□□□□ -2.28
PDGFRAP16234 MIR335-201ENST00000362173 94 ntBASIC0.8□□□□□ -2.28
PDGFRAP16234 Y_RNA.229-201ENST00000364347 113 ntBASIC0.8□□□□□ -2.28
PDGFRAP16234 RNU6-654P-201ENST00000364373 107 ntBASIC0.8□□□□□ -2.28
PDGFRAP16234 RNU6-396P-201ENST00000365369 105 ntBASIC0.8□□□□□ -2.28
PDGFRAP16234 Y_RNA.396-201ENST00000383949 103 ntBASIC0.8□□□□□ -2.28
PDGFRAP16234 Y_RNA.547-201ENST00000384654 119 ntBASIC0.8□□□□□ -2.28
PDGFRAP16234 MIR146A-201ENST00000385201 99 ntBASIC0.8□□□□□ -2.28
PDGFRAP16234 MIR548O-201ENST00000408583 114 ntBASIC0.8□□□□□ -2.28
PDGFRAP16234 AC006461.1-201ENST00000412637 326 ntBASIC0.8□□□□□ -2.28
PDGFRAP16234 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.8□□□□□ -2.28
PDGFRAP16234 snoU13.18-201ENST00000459483 104 ntBASIC0.8□□□□□ -2.28
PDGFRAP16234 AC113410.1-201ENST00000505029 247 ntBASIC0.8□□□□□ -2.28
PDGFRAP16234 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.8□□□□□ -2.28
PDGFRAP16234 RNU6-1110P-201ENST00000516462 101 ntBASIC0.8□□□□□ -2.28
PDGFRAP16234 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.8□□□□□ -2.28
PDGFRAP16234 MTND1P7-201ENST00000632801 297 ntBASIC0.8□□□□□ -2.28
PDGFRAP16234 MIR6866-201ENST00000638146 69 ntBASIC0.8□□□□□ -2.28
PDGFRAP16234 Y_RNA.24-201ENST00000362508 103 ntBASIC0.79□□□□□ -2.28
PDGFRAP16234 Y_RNA.82-201ENST00000363000 102 ntBASIC0.79□□□□□ -2.28
PDGFRAP16234 Y_RNA.92-201ENST00000363043 102 ntBASIC0.79□□□□□ -2.28
PDGFRAP16234 Y_RNA.235-201ENST00000364412 102 ntBASIC0.79□□□□□ -2.28
PDGFRAP16234 Y_RNA.306-201ENST00000365015 102 ntBASIC0.79□□□□□ -2.28
PDGFRAP16234 Y_RNA.312-201ENST00000365089 102 ntBASIC0.79□□□□□ -2.28
PDGFRAP16234 Y_RNA.322-201ENST00000365151 102 ntBASIC0.79□□□□□ -2.28
PDGFRAP16234 Y_RNA.486-201ENST00000384398 107 ntBASIC0.79□□□□□ -2.28
PDGFRAP16234 SNORA8.3-201ENST00000384679 139 ntBASIC0.79□□□□□ -2.28
PDGFRAP16234 MIR1302-6-201ENST00000408466 90 ntBASIC0.79□□□□□ -2.28
PDGFRAP16234 AC004941.2-201ENST00000427009 228 ntBASIC0.79□□□□□ -2.28
PDGFRAP16234 Y_RNA.650-201ENST00000459002 102 ntBASIC0.79□□□□□ -2.28
PDGFRAP16234 Y_RNA.666-201ENST00000516187 112 ntBASIC0.79□□□□□ -2.28
PDGFRAP16234 Y_RNA.777-201ENST00000516982 102 ntBASIC0.79□□□□□ -2.28
PDGFRAP16234 AC007751.1-201ENST00000529260 376 ntBASIC0.79□□□□□ -2.28
PDGFRAP16234 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.79□□□□□ -2.28
PDGFRAP16234 MIR548AO-201ENST00000579992 96 ntBASIC0.79□□□□□ -2.28
PDGFRAP16234 MIR5688-201ENST00000580619 83 ntBASIC0.79□□□□□ -2.28
PDGFRAP16234 Y_RNA.771-201ENST00000598668 102 ntBASIC0.79□□□□□ -2.28
PDGFRAP16234 RNU6-94P-201ENST00000607728 107 ntBASIC0.79□□□□□ -2.28
PDGFRAP16234 Y_RNA.789-201ENST00000622480 102 ntBASIC0.79□□□□□ -2.28
PDGFRAP16234 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
PDGFRAP16234 MIR626-201ENST00000385032 94 ntBASIC0.78□□□□□ -2.28
PDGFRAP16234 SNORD89-201ENST00000390981 114 ntBASIC0.78□□□□□ -2.28
PDGFRAP16234 Y_RNA.587-201ENST00000391210 103 ntBASIC0.78□□□□□ -2.28
PDGFRAP16234 AL358176.2-201ENST00000425769 204 ntBASIC0.78□□□□□ -2.28
PDGFRAP16234 AC067940.1-201ENST00000458411 300 ntBASIC0.78□□□□□ -2.28
PDGFRAP16234 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.78□□□□□ -2.28
PDGFRAP16234 RNU6-1223P-201ENST00000517124 104 ntBASIC0.78□□□□□ -2.28
PDGFRAP16234 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.78□□□□□ -2.28
PDGFRAP16234 MIR4662B-201ENST00000579498 81 ntBASIC0.78□□□□□ -2.28
PDGFRAP16234 AL360085.1-201ENST00000604713 532 ntBASIC0.78□□□□□ -2.28
PDGFRAP16234 AL136317.1-201ENST00000612653 226 ntBASIC0.78□□□□□ -2.28
PDGFRAP16234 AC243994.1-201ENST00000618627 109 ntBASIC0.78□□□□□ -2.28
PDGFRAP16234 HSBP1P2-201ENST00000299671 229 ntBASIC0.77□□□□□ -2.29
PDGFRAP16234 Y_RNA.168-201ENST00000363740 102 ntBASIC0.77□□□□□ -2.29
PDGFRAP16234 RNU6-1335P-201ENST00000365426 107 ntBASIC0.77□□□□□ -2.29
PDGFRAP16234 SNORA2B-201ENST00000384583 137 ntBASIC0.77□□□□□ -2.29
PDGFRAP16234 MIR548A2-201ENST00000384956 97 ntBASIC0.77□□□□□ -2.29
PDGFRAP16234 MIR605-201ENST00000385078 83 ntBASIC0.77□□□□□ -2.29
PDGFRAP16234 MIR100-201ENST00000385259 80 ntBASIC0.77□□□□□ -2.29
PDGFRAP16234 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.77□□□□□ -2.29
PDGFRAP16234 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.77□□□□□ -2.29
PDGFRAP16234 AC107297.1-201ENST00000459991 176 ntBASIC0.77□□□□□ -2.29
PDGFRAP16234 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.77□□□□□ -2.29
PDGFRAP16234 AC022709.1-201ENST00000615967 87 ntBASIC0.77□□□□□ -2.29
PDGFRAP16234 MIR7111-201ENST00000619751 72 ntBASIC0.77□□□□□ -2.29
PDGFRAP16234 Y_RNA.47-201ENST00000362697 108 ntBASIC0.76□□□□□ -2.29
PDGFRAP16234 RNU6-1309P-201ENST00000363305 108 ntBASIC0.76□□□□□ -2.29
PDGFRAP16234 Y_RNA.176-201ENST00000363815 109 ntBASIC0.76□□□□□ -2.29
PDGFRAP16234 snoU2_19.4-201ENST00000364329 80 ntBASIC0.76□□□□□ -2.29
PDGFRAP16234 Y_RNA.459-201ENST00000384251 102 ntBASIC0.76□□□□□ -2.29
PDGFRAP16234 MIR489-201ENST00000384923 84 ntBASIC0.76□□□□□ -2.29
PDGFRAP16234 MIR518F-201ENST00000384973 87 ntBASIC0.76□□□□□ -2.29
PDGFRAP16234 MT-TN-201ENST00000387400 73 ntBASIC0.76□□□□□ -2.29
PDGFRAP16234 Y_RNA.590-201ENST00000410140 107 ntBASIC0.76□□□□□ -2.29
PDGFRAP16234 RNU6-994P-201ENST00000410507 111 ntBASIC0.76□□□□□ -2.29
PDGFRAP16234 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.76□□□□□ -2.29
PDGFRAP16234 MIR4643-201ENST00000577473 78 ntBASIC0.76□□□□□ -2.29
PDGFRAP16234 MIR4282-201ENST00000583613 67 ntBASIC0.76□□□□□ -2.29
PDGFRAP16234 RNU6-580P-201ENST00000365159 107 ntBASIC0.75□□□□□ -2.29
PDGFRAP16234 RNU6-484P-201ENST00000384016 107 ntBASIC0.75□□□□□ -2.29
PDGFRAP16234 SNORA24-201ENST00000384096 131 ntBASIC0.75□□□□□ -2.29
PDGFRAP16234 Y_RNA.494-201ENST00000384432 111 ntBASIC0.75□□□□□ -2.29
PDGFRAP16234 RNU6-110P-201ENST00000384508 104 ntBASIC0.75□□□□□ -2.29
PDGFRAP16234 MT-TT-201ENST00000387460 66 ntBASIC0.75□□□□□ -2.29
PDGFRAP16234 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.75□□□□□ -2.29
PDGFRAP16234 RNU2-38P-201ENST00000410856 79 ntBASIC0.75□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 176 ms