Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 RNA5SP127-201ENST00000411051 133 ntBASIC0.18□□□□□ -2.38
CD28P10747 RNU6-938P-201ENST00000411285 103 ntBASIC0.18□□□□□ -2.38
CD28P10747 RNU7-149P-201ENST00000516739 59 ntBASIC0.18□□□□□ -2.38
CD28P10747 Y_RNA.715-201ENST00000517082 110 ntBASIC0.18□□□□□ -2.38
CD28P10747 AC040926.1-201ENST00000530195 238 ntBASIC0.18□□□□□ -2.38
CD28P10747 AC090897.1-201ENST00000580909 226 ntBASIC0.18□□□□□ -2.38
CD28P10747 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.18□□□□□ -2.38
CD28P10747 MIR2909-201ENST00000617113 69 ntBASIC0.18□□□□□ -2.38
CD28P10747 AC092634.7-201ENST00000621022 103 ntBASIC0.18□□□□□ -2.38
CD28P10747 SNORD44.1-201ENST00000363202 61 ntBASIC0.17□□□□□ -2.38
CD28P10747 SNORD115-28-201ENST00000363931 81 ntBASIC0.17□□□□□ -2.38
CD28P10747 MIR518A1-201ENST00000385068 85 ntBASIC0.17□□□□□ -2.38
CD28P10747 RNU6-763P-201ENST00000390865 106 ntBASIC0.17□□□□□ -2.38
CD28P10747 SNORA40.5-201ENST00000391061 128 ntBASIC0.17□□□□□ -2.38
CD28P10747 MIR938-201ENST00000401216 83 ntBASIC0.17□□□□□ -2.38
CD28P10747 MIR1302-11-201ENST00000408051 138 ntBASIC0.17□□□□□ -2.38
CD28P10747 MIR1302-9-201ENST00000408365 138 ntBASIC0.17□□□□□ -2.38
CD28P10747 MIR1302-10-201ENST00000408734 138 ntBASIC0.17□□□□□ -2.38
CD28P10747 AC015818.7-201ENST00000428754 109 ntBASIC0.17□□□□□ -2.38
CD28P10747 AC087499.7-201ENST00000441958 109 ntBASIC0.17□□□□□ -2.38
CD28P10747 HSPE1P25-201ENST00000455484 251 ntBASIC0.17□□□□□ -2.38
CD28P10747 SNORD77.4-201ENST00000516158 81 ntBASIC0.17□□□□□ -2.38
CD28P10747 RNU6-764P-201ENST00000516396 105 ntBASIC0.17□□□□□ -2.38
CD28P10747 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC0.17□□□□□ -2.38
CD28P10747 MIR4431-201ENST00000579990 94 ntBASIC0.17□□□□□ -2.38
CD28P10747 SNORD92-201ENST00000585078 85 ntBASIC0.17□□□□□ -2.38
CD28P10747 AL162730.1-201ENST00000605734 292 ntBASIC0.17□□□□□ -2.38
CD28P10747 MIR1302-2-201ENST00000607096 138 ntBASIC0.17□□□□□ -2.38
CD28P10747 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.17□□□□□ -2.38
CD28P10747 AC078938.1-201ENST00000620993 318 ntBASIC0.17□□□□□ -2.38
CD28P10747 Y_RNA.80-201ENST00000362996 102 ntBASIC0.16□□□□□ -2.38
CD28P10747 RNA5SP257-201ENST00000363023 116 ntBASIC0.16□□□□□ -2.38
CD28P10747 RNU6-1205P-201ENST00000363625 106 ntBASIC0.16□□□□□ -2.38
CD28P10747 Y_RNA.241-201ENST00000364470 117 ntBASIC0.16□□□□□ -2.38
CD28P10747 RNA5SP517-201ENST00000364724 117 ntBASIC0.16□□□□□ -2.38
CD28P10747 Y_RNA.315-201ENST00000365117 102 ntBASIC0.16□□□□□ -2.38
CD28P10747 Y_RNA.485-201ENST00000384395 102 ntBASIC0.16□□□□□ -2.38
CD28P10747 RNU6-913P-201ENST00000390913 95 ntBASIC0.16□□□□□ -2.38
CD28P10747 SNORA40.8-201ENST00000411034 126 ntBASIC0.16□□□□□ -2.38
CD28P10747 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.16□□□□□ -2.38
CD28P10747 AC236972.2-201ENST00000434979 310 ntBASIC0.16□□□□□ -2.38
CD28P10747 AC023449.1-201ENST00000454464 154 ntBASIC0.16□□□□□ -2.38
CD28P10747 Y_RNA.637-201ENST00000459424 114 ntBASIC0.16□□□□□ -2.38
CD28P10747 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.16□□□□□ -2.38
CD28P10747 MIR4662B-201ENST00000579498 81 ntBASIC0.16□□□□□ -2.38
CD28P10747 MIR5093-201ENST00000583199 100 ntBASIC0.16□□□□□ -2.38
CD28P10747 AC013791.1-201ENST00000616619 62 ntBASIC0.16□□□□□ -2.38
CD28P10747 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.16□□□□□ -2.38
CD28P10747 Y_RNA.813-201ENST00000364639 102 ntBASIC0.15□□□□□ -2.39
CD28P10747 SNORD24-201ENST00000383884 75 ntBASIC0.15□□□□□ -2.39
CD28P10747 SNORD38B-201ENST00000384690 67 ntBASIC0.15□□□□□ -2.39
CD28P10747 MIR548A2-201ENST00000384956 97 ntBASIC0.15□□□□□ -2.39
CD28P10747 MIR518F-201ENST00000384973 87 ntBASIC0.15□□□□□ -2.39
CD28P10747 MIR125B2-201ENST00000385128 89 ntBASIC0.15□□□□□ -2.39
CD28P10747 SNORD115-46-201ENST00000390982 71 ntBASIC0.15□□□□□ -2.39
CD28P10747 RNA5SP63-201ENST00000391225 112 ntBASIC0.15□□□□□ -2.39
CD28P10747 RNU6-1165P-201ENST00000410119 107 ntBASIC0.15□□□□□ -2.39
CD28P10747 RNU7-67P-201ENST00000459003 62 ntBASIC0.15□□□□□ -2.39
CD28P10747 snoU13.2-201ENST00000459201 104 ntBASIC0.15□□□□□ -2.39
CD28P10747 Y_RNA.661-201ENST00000516003 99 ntBASIC0.15□□□□□ -2.39
CD28P10747 Y_RNA.666-201ENST00000516187 112 ntBASIC0.15□□□□□ -2.39
CD28P10747 RNA5SP94-201ENST00000516917 108 ntBASIC0.15□□□□□ -2.39
CD28P10747 RNU2-31P-201ENST00000516954 155 ntBASIC0.15□□□□□ -2.39
CD28P10747 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.15□□□□□ -2.39
CD28P10747 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.15□□□□□ -2.39
CD28P10747 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.15□□□□□ -2.39
CD28P10747 AC008608.1-201ENST00000603910 127 ntBASIC0.15□□□□□ -2.39
CD28P10747 MIR6718-201ENST00000616153 80 ntBASIC0.15□□□□□ -2.39
CD28P10747 SNORD38B-202ENST00000625943 69 ntBASIC0.15□□□□□ -2.39
CD28P10747 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.14□□□□□ -2.39
CD28P10747 MIR103A1-201ENST00000362165 78 ntBASIC0.14□□□□□ -2.39
CD28P10747 SNORA72.1-201ENST00000363485 129 ntBASIC0.14□□□□□ -2.39
CD28P10747 SNORD113-8-201ENST00000363497 74 ntBASIC0.14□□□□□ -2.39
CD28P10747 Y_RNA.263-201ENST00000364659 114 ntBASIC0.14□□□□□ -2.39
CD28P10747 SNORA63.7-201ENST00000365579 123 ntBASIC0.14□□□□□ -2.39
CD28P10747 MTCO1P5-201ENST00000433573 344 ntBASIC0.14□□□□□ -2.39
CD28P10747 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC0.14□□□□□ -2.39
CD28P10747 MTCO2P24-201ENST00000515611 426 ntBASIC0.14□□□□□ -2.39
CD28P10747 RNU6-875P-201ENST00000516488 106 ntBASIC0.14□□□□□ -2.39
CD28P10747 RNU6-126P-201ENST00000516685 103 ntBASIC0.14□□□□□ -2.39
CD28P10747 RNU7-53P-201ENST00000516705 60 ntBASIC0.14□□□□□ -2.39
CD28P10747 RNU6-958P-201ENST00000516995 106 ntBASIC0.14□□□□□ -2.39
CD28P10747 MIR5688-201ENST00000580619 83 ntBASIC0.14□□□□□ -2.39
CD28P10747 AC010332.2-201ENST00000613083 1904 ntBASIC0.14□□□□□ -2.39
CD28P10747 Y_RNA.37-201ENST00000362606 108 ntBASIC0.13□□□□□ -2.39
CD28P10747 RNU4-90P-201ENST00000362773 141 ntBASIC0.13□□□□□ -2.39
CD28P10747 RNU6-1272P-201ENST00000362776 107 ntBASIC0.13□□□□□ -2.39
CD28P10747 SNORD118-201ENST00000363593 134 ntBASIC0.13□□□□□ -2.39
CD28P10747 Y_RNA.183-201ENST00000363882 113 ntBASIC0.13□□□□□ -2.39
CD28P10747 Y_RNA.197-201ENST00000364004 102 ntBASIC0.13□□□□□ -2.39
CD28P10747 Y_RNA.251-201ENST00000364551 99 ntBASIC0.13□□□□□ -2.39
CD28P10747 Y_RNA.395-201ENST00000383945 109 ntBASIC0.13□□□□□ -2.39
CD28P10747 Y_RNA.445-201ENST00000384168 102 ntBASIC0.13□□□□□ -2.39
CD28P10747 SNORA27-201ENST00000384323 126 ntBASIC0.13□□□□□ -2.39
CD28P10747 RNU6-102P-201ENST00000384485 104 ntBASIC0.13□□□□□ -2.39
CD28P10747 MIR588-201ENST00000384900 83 ntBASIC0.13□□□□□ -2.39
CD28P10747 MT-TF-201ENST00000387314 71 ntBASIC0.13□□□□□ -2.39
CD28P10747 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.13□□□□□ -2.39
CD28P10747 RNU6-383P-201ENST00000410864 94 ntBASIC0.13□□□□□ -2.39
CD28P10747 RNU6-602P-201ENST00000411155 105 ntBASIC0.13□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms