Protein–RNA interactions for Protein: P03905

MT-ND4, NADH-ubiquinone oxidoreductase chain 4, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND4P03905 SNORA40.5-201ENST00000391061 128 ntBASIC0.1□□□□□ -2.39
MT-ND4P03905 RNA5SP299-201ENST00000391203 116 ntBASIC0.1□□□□□ -2.39
MT-ND4P03905 RNU6-602P-201ENST00000411155 105 ntBASIC0.1□□□□□ -2.39
MT-ND4P03905 AC087499.4-201ENST00000448505 178 ntBASIC0.1□□□□□ -2.39
MT-ND4P03905 snoU13.2-201ENST00000459201 104 ntBASIC0.1□□□□□ -2.39
MT-ND4P03905 SNORD19B-201ENST00000459623 84 ntBASIC0.1□□□□□ -2.39
MT-ND4P03905 MRPS35P2-201ENST00000508242 191 ntBASIC0.1□□□□□ -2.39
MT-ND4P03905 RNU6-1046P-201ENST00000516538 107 ntBASIC0.1□□□□□ -2.39
MT-ND4P03905 RNU7-156P-201ENST00000517214 74 ntBASIC0.1□□□□□ -2.39
MT-ND4P03905 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.1□□□□□ -2.39
MT-ND4P03905 MIR3678-201ENST00000578455 94 ntBASIC0.1□□□□□ -2.39
MT-ND4P03905 SNORA4-201ENST00000584302 138 ntBASIC0.1□□□□□ -2.39
MT-ND4P03905 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.09□□□□□ -2.4
MT-ND4P03905 RNU6-1309P-201ENST00000363305 108 ntBASIC0.09□□□□□ -2.4
MT-ND4P03905 Y_RNA.486-201ENST00000384398 107 ntBASIC0.09□□□□□ -2.4
MT-ND4P03905 RNU6-102P-201ENST00000384485 104 ntBASIC0.09□□□□□ -2.4
MT-ND4P03905 Y_RNA.526-201ENST00000384572 110 ntBASIC0.09□□□□□ -2.4
MT-ND4P03905 MIR1295A-201ENST00000408463 79 ntBASIC0.09□□□□□ -2.4
MT-ND4P03905 MIR1257-201ENST00000408490 117 ntBASIC0.09□□□□□ -2.4
MT-ND4P03905 MTCO1P5-201ENST00000433573 344 ntBASIC0.09□□□□□ -2.4
MT-ND4P03905 Y_RNA.637-201ENST00000459424 114 ntBASIC0.09□□□□□ -2.4
MT-ND4P03905 AC040926.1-201ENST00000530195 238 ntBASIC0.09□□□□□ -2.4
MT-ND4P03905 AC122108.2-201ENST00000611946 526 ntBASIC0.09□□□□□ -2.4
MT-ND4P03905 MIR924-201ENST00000638017 53 ntBASIC0.09□□□□□ -2.4
MT-ND4P03905 Y_RNA.37-201ENST00000362606 108 ntBASIC0.08□□□□□ -2.4
MT-ND4P03905 Y_RNA.136-201ENST00000363444 102 ntBASIC0.08□□□□□ -2.4
MT-ND4P03905 SNORD113-8-201ENST00000363497 74 ntBASIC0.08□□□□□ -2.4
MT-ND4P03905 Y_RNA.226-201ENST00000364337 114 ntBASIC0.08□□□□□ -2.4
MT-ND4P03905 RNU6-815P-201ENST00000384080 113 ntBASIC0.08□□□□□ -2.4
MT-ND4P03905 SNORA27-201ENST00000384323 126 ntBASIC0.08□□□□□ -2.4
MT-ND4P03905 MIR548A2-201ENST00000384956 97 ntBASIC0.08□□□□□ -2.4
MT-ND4P03905 Y_RNA.587-201ENST00000391210 103 ntBASIC0.08□□□□□ -2.4
MT-ND4P03905 RNA5SP496-201ENST00000391240 109 ntBASIC0.08□□□□□ -2.4
MT-ND4P03905 MIR1287-201ENST00000408492 90 ntBASIC0.08□□□□□ -2.4
MT-ND4P03905 RPS29P24-201ENST00000486345 171 ntBASIC0.08□□□□□ -2.4
MT-ND4P03905 Y_RNA.676-201ENST00000516393 96 ntBASIC0.08□□□□□ -2.4
MT-ND4P03905 RNU7-53P-201ENST00000516705 60 ntBASIC0.08□□□□□ -2.4
MT-ND4P03905 AC013791.1-201ENST00000616619 62 ntBASIC0.08□□□□□ -2.4
MT-ND4P03905 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.08□□□□□ -2.4
MT-ND4P03905 uc_338.16-201ENST00000621804 95 ntBASIC0.08□□□□□ -2.4
MT-ND4P03905 SNORA1.1-201ENST00000364671 133 ntBASIC0.07□□□□□ -2.4
MT-ND4P03905 RNA5SP117-201ENST00000365294 118 ntBASIC0.07□□□□□ -2.4
MT-ND4P03905 Y_RNA.567-201ENST00000384736 106 ntBASIC0.07□□□□□ -2.4
MT-ND4P03905 MIR563-201ENST00000385080 79 ntBASIC0.07□□□□□ -2.4
MT-ND4P03905 SNORD12C-201ENST00000386307 89 ntBASIC0.07□□□□□ -2.4
MT-ND4P03905 RNU2-70P-201ENST00000410718 179 ntBASIC0.07□□□□□ -2.4
MT-ND4P03905 RNU6-1190P-201ENST00000410811 104 ntBASIC0.07□□□□□ -2.4
MT-ND4P03905 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.07□□□□□ -2.4
MT-ND4P03905 AC073261.1-201ENST00000429409 121 ntBASIC0.07□□□□□ -2.4
MT-ND4P03905 RBMX2P4-201ENST00000441256 376 ntBASIC0.07□□□□□ -2.4
MT-ND4P03905 HSPE1P25-201ENST00000455484 251 ntBASIC0.07□□□□□ -2.4
MT-ND4P03905 RNU6-863P-201ENST00000515989 104 ntBASIC0.07□□□□□ -2.4
MT-ND4P03905 RNU6-976P-201ENST00000516086 111 ntBASIC0.07□□□□□ -2.4
MT-ND4P03905 RNU6-693P-201ENST00000516134 107 ntBASIC0.07□□□□□ -2.4
MT-ND4P03905 SNORD77.4-201ENST00000516158 81 ntBASIC0.07□□□□□ -2.4
MT-ND4P03905 SNORD36C-201ENST00000516733 66 ntBASIC0.07□□□□□ -2.4
MT-ND4P03905 RNU6-448P-201ENST00000517052 107 ntBASIC0.07□□□□□ -2.4
MT-ND4P03905 UBE2V2P2-201ENST00000587677 504 ntBASIC0.07□□□□□ -2.4
MT-ND4P03905 C8orf59P2-201ENST00000603441 271 ntBASIC0.07□□□□□ -2.4
MT-ND4P03905 AC006157.1-201ENST00000611750 366 ntBASIC0.07□□□□□ -2.4
MT-ND4P03905 MIR30D-201ENST00000362283 70 ntBASIC0.06□□□□□ -2.4
MT-ND4P03905 Y_RNA.14-201ENST00000362415 103 ntBASIC0.06□□□□□ -2.4
MT-ND4P03905 Y_RNA.70-201ENST00000362886 110 ntBASIC0.06□□□□□ -2.4
MT-ND4P03905 Y_RNA.505-201ENST00000384489 102 ntBASIC0.06□□□□□ -2.4
MT-ND4P03905 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC0.06□□□□□ -2.4
MT-ND4P03905 Y_RNA.602-201ENST00000410535 92 ntBASIC0.06□□□□□ -2.4
MT-ND4P03905 AC069113.3-201ENST00000521019 150 ntBASIC0.06□□□□□ -2.4
MT-ND4P03905 AC133485.4-201ENST00000561835 220 ntBASIC0.06□□□□□ -2.4
MT-ND4P03905 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.06□□□□□ -2.4
MT-ND4P03905 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.06□□□□□ -2.4
MT-ND4P03905 MIR367-201ENST00000362299 68 ntBASIC0.05□□□□□ -2.4
MT-ND4P03905 Y_RNA.116-201ENST00000363292 103 ntBASIC0.05□□□□□ -2.4
MT-ND4P03905 SNORA36.1-201ENST00000363424 132 ntBASIC0.05□□□□□ -2.4
MT-ND4P03905 Y_RNA.238-201ENST00000364441 102 ntBASIC0.05□□□□□ -2.4
MT-ND4P03905 Y_RNA.315-201ENST00000365117 102 ntBASIC0.05□□□□□ -2.4
MT-ND4P03905 Y_RNA.424-201ENST00000384063 103 ntBASIC0.05□□□□□ -2.4
MT-ND4P03905 SNORD61-201ENST00000384252 73 ntBASIC0.05□□□□□ -2.4
MT-ND4P03905 Y_RNA.569-201ENST00000384749 103 ntBASIC0.05□□□□□ -2.4
MT-ND4P03905 AL138752.1-201ENST00000452964 351 ntBASIC0.05□□□□□ -2.4
MT-ND4P03905 FGF7P4-201ENST00000509595 295 ntBASIC0.05□□□□□ -2.4
MT-ND4P03905 SNORA62.5-201ENST00000516634 120 ntBASIC0.05□□□□□ -2.4
MT-ND4P03905 RNU2-31P-201ENST00000516954 155 ntBASIC0.05□□□□□ -2.4
MT-ND4P03905 Y_RNA.715-201ENST00000517082 110 ntBASIC0.05□□□□□ -2.4
MT-ND4P03905 MIR5692C2-201ENST00000577959 77 ntBASIC0.05□□□□□ -2.4
MT-ND4P03905 MIR4724-201ENST00000579485 89 ntBASIC0.05□□□□□ -2.4
MT-ND4P03905 MIR4662B-201ENST00000579498 81 ntBASIC0.05□□□□□ -2.4
MT-ND4P03905 MIR376A1-201ENST00000616574 68 ntBASIC0.05□□□□□ -2.4
MT-ND4P03905 MIR4315-1-201ENST00000636800 73 ntBASIC0.05□□□□□ -2.4
MT-ND4P03905 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.05□□□□□ -2.4
MT-ND4P03905 MIR4315-2-201ENST00000640925 73 ntBASIC0.05□□□□□ -2.4
MT-ND4P03905 SNORD114-23-201ENST00000363536 72 ntBASIC0.04□□□□□ -2.4
MT-ND4P03905 MT-TF-201ENST00000387314 71 ntBASIC0.04□□□□□ -2.4
MT-ND4P03905 Y_RNA.639-201ENST00000458981 102 ntBASIC0.04□□□□□ -2.4
MT-ND4P03905 MTCO2P24-201ENST00000515611 426 ntBASIC0.04□□□□□ -2.4
MT-ND4P03905 RNU6-1270P-201ENST00000517128 108 ntBASIC0.04□□□□□ -2.4
MT-ND4P03905 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.04□□□□□ -2.4
MT-ND4P03905 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.04□□□□□ -2.4
MT-ND4P03905 AC007485.1-201ENST00000616755 206 ntBASIC0.04□□□□□ -2.4
MT-ND4P03905 RNU6-740P-201ENST00000364734 105 ntBASIC0.03□□□□□ -2.4
MT-ND4P03905 Y_RNA.293-201ENST00000364908 93 ntBASIC0.03□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 195.3 ms