Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 AL662814.1-201ENST00000617364 121 ntBASIC-0.85□□□□□ -2.55
APOEP02649 AC092794.2-201ENST00000620933 563 ntBASIC-0.85□□□□□ -2.55
APOEP02649 RNU4-73P-201ENST00000363164 141 ntBASIC-0.86□□□□□ -2.55
APOEP02649 MIR604-201ENST00000384880 94 ntBASIC-0.86□□□□□ -2.55
APOEP02649 AL022718.1-201ENST00000412004 84 ntBASIC-0.86□□□□□ -2.55
APOEP02649 MIR4790-201ENST00000577799 79 ntBASIC-0.86□□□□□ -2.55
APOEP02649 U7.6-201ENST00000610841 64 ntBASIC-0.86□□□□□ -2.55
APOEP02649 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC-0.86□□□□□ -2.55
APOEP02649 AL162726.3-218ENST00000636401 95 ntBASIC-0.86□□□□□ -2.55
APOEP02649 RNA5SP245-201ENST00000364239 121 ntBASIC-0.87□□□□□ -2.55
APOEP02649 RNU6-726P-201ENST00000364680 107 ntBASIC-0.87□□□□□ -2.55
APOEP02649 SNORA75.1-201ENST00000391130 148 ntBASIC-0.87□□□□□ -2.55
APOEP02649 MIR548I3-201ENST00000408378 149 ntBASIC-0.87□□□□□ -2.55
APOEP02649 RNU6-1050P-201ENST00000410388 107 ntBASIC-0.87□□□□□ -2.55
APOEP02649 RNA5SP237-201ENST00000410414 113 ntBASIC-0.87□□□□□ -2.55
APOEP02649 RNU6-1148P-201ENST00000410992 104 ntBASIC-0.87□□□□□ -2.55
APOEP02649 AC096949.1-201ENST00000412047 152 ntBASIC-0.87□□□□□ -2.55
APOEP02649 AC138749.4-201ENST00000563970 127 ntBASIC-0.87□□□□□ -2.55
APOEP02649 DEFB117-201ENST00000602356 141 ntBASIC-0.87□□□□□ -2.55
APOEP02649 AL162376.1-201ENST00000624117 175 ntBASIC-0.87□□□□□ -2.55
APOEP02649 AC024614.3-201ENST00000637860 256 ntBASIC-0.87□□□□□ -2.55
APOEP02649 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.88□□□□□ -2.55
APOEP02649 RNU6-597P-201ENST00000365620 102 ntBASIC-0.88□□□□□ -2.55
APOEP02649 SNORA22B-201ENST00000383876 138 ntBASIC-0.88□□□□□ -2.55
APOEP02649 Z95118.1-201ENST00000421372 247 ntBASIC-0.88□□□□□ -2.55
APOEP02649 AC108059.2-201ENST00000434626 151 ntBASIC-0.88□□□□□ -2.55
APOEP02649 AC114755.3-201ENST00000481111 251 ntBASIC-0.88□□□□□ -2.55
APOEP02649 RNU6-758P-201ENST00000516292 89 ntBASIC-0.88□□□□□ -2.55
APOEP02649 RNU6-1314P-201ENST00000517139 104 ntBASIC-0.88□□□□□ -2.55
APOEP02649 Y_RNA.37-201ENST00000362606 108 ntBASIC-0.89□□□□□ -2.55
APOEP02649 RNU4-84P-201ENST00000364200 139 ntBASIC-0.89□□□□□ -2.55
APOEP02649 RNU6-259P-201ENST00000383999 107 ntBASIC-0.89□□□□□ -2.55
APOEP02649 Y_RNA.552-201ENST00000384665 112 ntBASIC-0.89□□□□□ -2.55
APOEP02649 MTATP6P19-201ENST00000413797 659 ntBASIC-0.89□□□□□ -2.55
APOEP02649 MTND1P2-201ENST00000430604 821 ntBASIC-0.89□□□□□ -2.55
APOEP02649 RNU2-11P-201ENST00000459191 187 ntBASIC-0.89□□□□□ -2.55
APOEP02649 RPL7P42-201ENST00000481005 679 ntBASIC-0.89□□□□□ -2.55
APOEP02649 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC-0.89□□□□□ -2.55
APOEP02649 MTND5P5-201ENST00000503764 376 ntBASIC-0.89□□□□□ -2.55
APOEP02649 AC010424.1-201ENST00000506336 297 ntBASIC-0.89□□□□□ -2.55
APOEP02649 RNA5SP395-201ENST00000516567 118 ntBASIC-0.89□□□□□ -2.55
APOEP02649 RNU6-1016P-201ENST00000516689 94 ntBASIC-0.89□□□□□ -2.55
APOEP02649 SNORD36C-201ENST00000516733 66 ntBASIC-0.89□□□□□ -2.55
APOEP02649 MIR378D2-201ENST00000580636 98 ntBASIC-0.89□□□□□ -2.55
APOEP02649 AC022140.2-201ENST00000623500 188 ntBASIC-0.89□□□□□ -2.55
APOEP02649 MIR148A-201ENST00000362215 68 ntBASIC-0.9□□□□□ -2.55
APOEP02649 Y_RNA.7-201ENST00000362352 102 ntBASIC-0.9□□□□□ -2.55
APOEP02649 Y_RNA.49-201ENST00000362714 112 ntBASIC-0.9□□□□□ -2.55
APOEP02649 SNORD115-24-201ENST00000363528 82 ntBASIC-0.9□□□□□ -2.55
APOEP02649 RNU6-99P-201ENST00000364721 107 ntBASIC-0.9□□□□□ -2.55
APOEP02649 RNU6-1013P-201ENST00000384180 107 ntBASIC-0.9□□□□□ -2.55
APOEP02649 SNORD77.3-201ENST00000391113 65 ntBASIC-0.9□□□□□ -2.55
APOEP02649 SNORD75.1-201ENST00000408373 60 ntBASIC-0.9□□□□□ -2.55
APOEP02649 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC-0.9□□□□□ -2.55
APOEP02649 RNU7-141P-201ENST00000459304 62 ntBASIC-0.9□□□□□ -2.55
APOEP02649 RNU7-149P-201ENST00000516739 59 ntBASIC-0.9□□□□□ -2.55
APOEP02649 SNORA25.16-201ENST00000516741 121 ntBASIC-0.9□□□□□ -2.55
APOEP02649 MIR4263-201ENST00000584745 83 ntBASIC-0.9□□□□□ -2.55
APOEP02649 AC122108.2-201ENST00000611946 526 ntBASIC-0.9□□□□□ -2.55
APOEP02649 AC087588.2-201ENST00000617667 426 ntBASIC-0.9□□□□□ -2.55
APOEP02649 Y_RNA.230-201ENST00000364348 109 ntBASIC-0.91□□□□□ -2.56
APOEP02649 Y_RNA.301-201ENST00000364990 103 ntBASIC-0.91□□□□□ -2.56
APOEP02649 RNU6-480P-201ENST00000384332 107 ntBASIC-0.91□□□□□ -2.56
APOEP02649 MIR548L-201ENST00000408303 86 ntBASIC-0.91□□□□□ -2.56
APOEP02649 Y_RNA.592-201ENST00000410274 109 ntBASIC-0.91□□□□□ -2.56
APOEP02649 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC-0.91□□□□□ -2.56
APOEP02649 MTATP6P26-201ENST00000445926 662 ntBASIC-0.91□□□□□ -2.56
APOEP02649 MTND4P19-201ENST00000446659 478 ntBASIC-0.91□□□□□ -2.56
APOEP02649 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-0.91□□□□□ -2.56
APOEP02649 RN7SKP295-201ENST00000517264 153 ntBASIC-0.91□□□□□ -2.56
APOEP02649 AC005357.1-201ENST00000588399 301 ntBASIC-0.91□□□□□ -2.56
APOEP02649 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.91□□□□□ -2.56
APOEP02649 AL391099.1-201ENST00000624635 187 ntBASIC-0.91□□□□□ -2.56
APOEP02649 AC090582.1-201ENST00000636321 199 ntBASIC-0.91□□□□□ -2.56
APOEP02649 SNORA63.5-201ENST00000363548 123 ntBASIC-0.92□□□□□ -2.56
APOEP02649 SNORD114-11-201ENST00000363738 75 ntBASIC-0.92□□□□□ -2.56
APOEP02649 RNU6-1119P-201ENST00000384349 108 ntBASIC-0.92□□□□□ -2.56
APOEP02649 SNORA69.1-201ENST00000390904 137 ntBASIC-0.92□□□□□ -2.56
APOEP02649 SNORD115-47-201ENST00000391226 86 ntBASIC-0.92□□□□□ -2.56
APOEP02649 MIR1265-201ENST00000408444 86 ntBASIC-0.92□□□□□ -2.56
APOEP02649 RNU2-14P-201ENST00000411053 191 ntBASIC-0.92□□□□□ -2.56
APOEP02649 Y_RNA.682-201ENST00000516457 100 ntBASIC-0.92□□□□□ -2.56
APOEP02649 MIR4659A-201ENST00000580269 81 ntBASIC-0.92□□□□□ -2.56
APOEP02649 MIR4432-201ENST00000581823 84 ntBASIC-0.92□□□□□ -2.56
APOEP02649 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC-0.92□□□□□ -2.56
APOEP02649 AC096720.1-201ENST00000604441 183 ntBASIC-0.92□□□□□ -2.56
APOEP02649 AL596211.1-201ENST00000569873 2277 ntBASIC-0.92□□□□□ -2.56
APOEP02649 Y_RNA.404-201ENST00000383978 102 ntBASIC-0.93□□□□□ -2.56
APOEP02649 Y_RNA.477-201ENST00000384352 108 ntBASIC-0.93□□□□□ -2.56
APOEP02649 SNORD78.2-201ENST00000391076 69 ntBASIC-0.93□□□□□ -2.56
APOEP02649 SNORA26.6-201ENST00000391256 115 ntBASIC-0.93□□□□□ -2.56
APOEP02649 AC009161.1-201ENST00000417306 376 ntBASIC-0.93□□□□□ -2.56
APOEP02649 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC-0.93□□□□□ -2.56
APOEP02649 RNU7-45P-201ENST00000459460 63 ntBASIC-0.93□□□□□ -2.56
APOEP02649 AC124312.5-201ENST00000604451 268 ntBASIC-0.93□□□□□ -2.56
APOEP02649 uc_338.28-201ENST00000612082 187 ntBASIC-0.93□□□□□ -2.56
APOEP02649 MIR6717-201ENST00000622747 73 ntBASIC-0.93□□□□□ -2.56
APOEP02649 RNU6-1042P-201ENST00000384204 107 ntBASIC-0.94□□□□□ -2.56
APOEP02649 RNY3P4-201ENST00000384428 101 ntBASIC-0.94□□□□□ -2.56
APOEP02649 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.94□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms