Protein–RNA interactions for Protein: P01135

TGFA, Protransforming growth factor alpha, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TGFAP01135 SNORD38B-201ENST00000384690 67 ntBASIC0.31□□□□□ -2.36
TGFAP01135 MIR938-201ENST00000401216 83 ntBASIC0.31□□□□□ -2.36
TGFAP01135 MTND4LP30-201ENST00000454092 297 ntBASIC0.31□□□□□ -2.36
TGFAP01135 RNU7-56P-201ENST00000458744 62 ntBASIC0.31□□□□□ -2.36
TGFAP01135 RNU7-53P-201ENST00000516705 60 ntBASIC0.31□□□□□ -2.36
TGFAP01135 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
TGFAP01135 AP000942.4-201ENST00000604811 241 ntBASIC0.31□□□□□ -2.36
TGFAP01135 PART1_1.1-201ENST00000611761 217 ntBASIC0.31□□□□□ -2.36
TGFAP01135 SNORD38B-202ENST00000625943 69 ntBASIC0.31□□□□□ -2.36
TGFAP01135 RNA5SP257-201ENST00000363023 116 ntBASIC0.3□□□□□ -2.36
TGFAP01135 Y_RNA.263-201ENST00000364659 114 ntBASIC0.3□□□□□ -2.36
TGFAP01135 RNU6-1327P-201ENST00000365302 105 ntBASIC0.3□□□□□ -2.36
TGFAP01135 RNU6-763P-201ENST00000390865 106 ntBASIC0.3□□□□□ -2.36
TGFAP01135 RNU6-130P-201ENST00000411112 103 ntBASIC0.3□□□□□ -2.36
TGFAP01135 RNU6-764P-201ENST00000516396 105 ntBASIC0.3□□□□□ -2.36
TGFAP01135 AC006157.1-201ENST00000611750 366 ntBASIC0.3□□□□□ -2.36
TGFAP01135 MIR376A1-201ENST00000616574 68 ntBASIC0.3□□□□□ -2.36
TGFAP01135 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.29□□□□□ -2.36
TGFAP01135 RNU4-90P-201ENST00000362773 141 ntBASIC0.29□□□□□ -2.36
TGFAP01135 Y_RNA.80-201ENST00000362996 102 ntBASIC0.29□□□□□ -2.36
TGFAP01135 SNORD113-8-201ENST00000363497 74 ntBASIC0.29□□□□□ -2.36
TGFAP01135 SNORD115-28-201ENST00000363931 81 ntBASIC0.29□□□□□ -2.36
TGFAP01135 RNU6-1283P-201ENST00000365314 105 ntBASIC0.29□□□□□ -2.36
TGFAP01135 Y_RNA.445-201ENST00000384168 102 ntBASIC0.29□□□□□ -2.36
TGFAP01135 Y_RNA.485-201ENST00000384395 102 ntBASIC0.29□□□□□ -2.36
TGFAP01135 RNU6-1009P-201ENST00000390996 107 ntBASIC0.29□□□□□ -2.36
TGFAP01135 SNORA40.5-201ENST00000391061 128 ntBASIC0.29□□□□□ -2.36
TGFAP01135 AC090844.1-201ENST00000422019 156 ntBASIC0.29□□□□□ -2.36
TGFAP01135 AC091959.1-201ENST00000495857 238 ntBASIC0.29□□□□□ -2.36
TGFAP01135 AC020891.4-201ENST00000605745 93 ntBASIC0.29□□□□□ -2.36
TGFAP01135 AC013791.1-201ENST00000616619 62 ntBASIC0.29□□□□□ -2.36
TGFAP01135 Z97988.1-201ENST00000637697 135 ntBASIC0.29□□□□□ -2.36
TGFAP01135 MIR367-201ENST00000362299 68 ntBASIC0.28□□□□□ -2.36
TGFAP01135 Y_RNA.197-201ENST00000364004 102 ntBASIC0.28□□□□□ -2.36
TGFAP01135 Y_RNA.424-201ENST00000384063 103 ntBASIC0.28□□□□□ -2.36
TGFAP01135 SNORD100-201ENST00000408573 76 ntBASIC0.28□□□□□ -2.36
TGFAP01135 SNORD71-201ENST00000411292 86 ntBASIC0.28□□□□□ -2.36
TGFAP01135 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC0.28□□□□□ -2.36
TGFAP01135 AC002350.1-201ENST00000490759 375 ntBASIC0.28□□□□□ -2.36
TGFAP01135 uc_338.16-201ENST00000621804 95 ntBASIC0.28□□□□□ -2.36
TGFAP01135 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.28□□□□□ -2.36
TGFAP01135 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.28□□□□□ -2.36
TGFAP01135 Y_RNA.315-201ENST00000365117 102 ntBASIC0.27□□□□□ -2.37
TGFAP01135 Y_RNA.569-201ENST00000384749 103 ntBASIC0.27□□□□□ -2.37
TGFAP01135 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.27□□□□□ -2.37
TGFAP01135 BTF3P11-201ENST00000426582 477 ntBASIC0.27□□□□□ -2.37
TGFAP01135 SNORD77.4-201ENST00000516158 81 ntBASIC0.27□□□□□ -2.37
TGFAP01135 RNU6-875P-201ENST00000516488 106 ntBASIC0.27□□□□□ -2.37
TGFAP01135 RNU6-958P-201ENST00000516995 106 ntBASIC0.27□□□□□ -2.37
TGFAP01135 Y_RNA.183-201ENST00000363882 113 ntBASIC0.26□□□□□ -2.37
TGFAP01135 Y_RNA.529-201ENST00000384586 119 ntBASIC0.26□□□□□ -2.37
TGFAP01135 Y_RNA.587-201ENST00000391210 103 ntBASIC0.26□□□□□ -2.37
TGFAP01135 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.26□□□□□ -2.37
TGFAP01135 AC015818.7-201ENST00000428754 109 ntBASIC0.26□□□□□ -2.37
TGFAP01135 MTCO1P5-201ENST00000433573 344 ntBASIC0.26□□□□□ -2.37
TGFAP01135 AC087499.7-201ENST00000441958 109 ntBASIC0.26□□□□□ -2.37
TGFAP01135 HSPE1P25-201ENST00000455484 251 ntBASIC0.26□□□□□ -2.37
TGFAP01135 Y_RNA.666-201ENST00000516187 112 ntBASIC0.26□□□□□ -2.37
TGFAP01135 Y_RNA.681-201ENST00000516445 113 ntBASIC0.26□□□□□ -2.37
TGFAP01135 MIR4724-201ENST00000579485 89 ntBASIC0.26□□□□□ -2.37
TGFAP01135 AC090897.1-201ENST00000580909 226 ntBASIC0.26□□□□□ -2.37
TGFAP01135 AL049861.1-201ENST00000603130 150 ntBASIC0.26□□□□□ -2.37
TGFAP01135 AC124312.5-201ENST00000604451 268 ntBASIC0.26□□□□□ -2.37
TGFAP01135 MIR8055-201ENST00000610739 97 ntBASIC0.26□□□□□ -2.37
TGFAP01135 MIR6740-201ENST00000618268 113 ntBASIC0.26□□□□□ -2.37
TGFAP01135 AC090574.1-201ENST00000623186 233 ntBASIC0.26□□□□□ -2.37
TGFAP01135 Y_RNA.68-201ENST00000362881 102 ntBASIC0.25□□□□□ -2.37
TGFAP01135 Y_RNA.813-201ENST00000364639 102 ntBASIC0.25□□□□□ -2.37
TGFAP01135 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.25□□□□□ -2.37
TGFAP01135 SNORD24-201ENST00000383884 75 ntBASIC0.25□□□□□ -2.37
TGFAP01135 SNORA27-201ENST00000384323 126 ntBASIC0.25□□□□□ -2.37
TGFAP01135 RNU6-364P-201ENST00000384387 107 ntBASIC0.25□□□□□ -2.37
TGFAP01135 RNU6-1319P-201ENST00000390855 104 ntBASIC0.25□□□□□ -2.37
TGFAP01135 RNU6-747P-201ENST00000390928 104 ntBASIC0.25□□□□□ -2.37
TGFAP01135 RNU6-241P-201ENST00000391148 104 ntBASIC0.25□□□□□ -2.37
TGFAP01135 RNU6-447P-201ENST00000410293 104 ntBASIC0.25□□□□□ -2.37
TGFAP01135 RNU6-1118P-201ENST00000410382 104 ntBASIC0.25□□□□□ -2.37
TGFAP01135 RNU6-1076P-201ENST00000410397 104 ntBASIC0.25□□□□□ -2.37
TGFAP01135 RNU6-355P-201ENST00000410427 104 ntBASIC0.25□□□□□ -2.37
TGFAP01135 RNU6-791P-201ENST00000410467 104 ntBASIC0.25□□□□□ -2.37
TGFAP01135 RNU6-705P-201ENST00000410601 104 ntBASIC0.25□□□□□ -2.37
TGFAP01135 RNU6-1100P-201ENST00000410691 104 ntBASIC0.25□□□□□ -2.37
TGFAP01135 RNU6-860P-201ENST00000410860 104 ntBASIC0.25□□□□□ -2.37
TGFAP01135 RNU6-383P-201ENST00000410864 94 ntBASIC0.25□□□□□ -2.37
TGFAP01135 SNORA40.8-201ENST00000411034 126 ntBASIC0.25□□□□□ -2.37
TGFAP01135 RNU6-1217P-201ENST00000411276 104 ntBASIC0.25□□□□□ -2.37
TGFAP01135 RNU6-785P-201ENST00000411324 104 ntBASIC0.25□□□□□ -2.37
TGFAP01135 RPS29P24-201ENST00000486345 171 ntBASIC0.25□□□□□ -2.37
TGFAP01135 AC108740.1-201ENST00000498629 225 ntBASIC0.25□□□□□ -2.37
TGFAP01135 RNU6-1046P-201ENST00000516538 107 ntBASIC0.25□□□□□ -2.37
TGFAP01135 MIR5692C2-201ENST00000577959 77 ntBASIC0.25□□□□□ -2.37
TGFAP01135 MIR5688-201ENST00000580619 83 ntBASIC0.25□□□□□ -2.37
TGFAP01135 U6.90-201ENST00000614007 104 ntBASIC0.25□□□□□ -2.37
TGFAP01135 U6.70-201ENST00000620287 104 ntBASIC0.25□□□□□ -2.37
TGFAP01135 AC010332.2-201ENST00000613083 1904 ntBASIC0.25□□□□□ -2.37
TGFAP01135 Y_RNA.37-201ENST00000362606 108 ntBASIC0.24□□□□□ -2.37
TGFAP01135 SNORA1.1-201ENST00000364671 133 ntBASIC0.24□□□□□ -2.37
TGFAP01135 Y_RNA.356-201ENST00000365475 113 ntBASIC0.24□□□□□ -2.37
TGFAP01135 Y_RNA.494-201ENST00000384432 111 ntBASIC0.24□□□□□ -2.37
TGFAP01135 MIR518A1-201ENST00000385068 85 ntBASIC0.24□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 173 ms