Protein–RNA interactions for Protein: P00558

PGK1, Phosphoglycerate kinase 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1P00558 RNU6-651P-201ENST00000411040 105 ntBASIC0.75□□□□□ -2.29
PGK1P00558 MTCO2P24-201ENST00000515611 426 ntBASIC0.75□□□□□ -2.29
PGK1P00558 RNU2-13P-201ENST00000515909 113 ntBASIC0.75□□□□□ -2.29
PGK1P00558 AC100767.1-201ENST00000528178 123 ntBASIC0.75□□□□□ -2.29
PGK1P00558 AC023827.1-201ENST00000569247 97 ntBASIC0.75□□□□□ -2.29
PGK1P00558 MIR4724-201ENST00000579485 89 ntBASIC0.75□□□□□ -2.29
PGK1P00558 MIR6516-201ENST00000630554 81 ntBASIC0.75□□□□□ -2.29
PGK1P00558 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
PGK1P00558 RNA5SP347-201ENST00000362445 119 ntBASIC0.74□□□□□ -2.29
PGK1P00558 Y_RNA.115-201ENST00000363272 98 ntBASIC0.74□□□□□ -2.29
PGK1P00558 Y_RNA.293-201ENST00000364908 93 ntBASIC0.74□□□□□ -2.29
PGK1P00558 Y_RNA.376-201ENST00000365638 108 ntBASIC0.74□□□□□ -2.29
PGK1P00558 RNU6-211P-201ENST00000384047 107 ntBASIC0.74□□□□□ -2.29
PGK1P00558 RNU6-472P-201ENST00000384299 107 ntBASIC0.74□□□□□ -2.29
PGK1P00558 RNU6-1289P-201ENST00000384431 106 ntBASIC0.74□□□□□ -2.29
PGK1P00558 Y_RNA.547-201ENST00000384654 119 ntBASIC0.74□□□□□ -2.29
PGK1P00558 MIR548A2-201ENST00000384956 97 ntBASIC0.74□□□□□ -2.29
PGK1P00558 RNA5SP496-201ENST00000391240 109 ntBASIC0.74□□□□□ -2.29
PGK1P00558 RNA5SP95-201ENST00000410319 137 ntBASIC0.74□□□□□ -2.29
PGK1P00558 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.74□□□□□ -2.29
PGK1P00558 AC098934.3-201ENST00000430450 190 ntBASIC0.74□□□□□ -2.29
PGK1P00558 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.74□□□□□ -2.29
PGK1P00558 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.74□□□□□ -2.29
PGK1P00558 SNORD2.1-201ENST00000458762 69 ntBASIC0.74□□□□□ -2.29
PGK1P00558 TRBVB-201ENST00000477100 408 ntBASIC0.74□□□□□ -2.29
PGK1P00558 AC109810.1-201ENST00000534066 224 ntBASIC0.74□□□□□ -2.29
PGK1P00558 U2.14-201ENST00000615943 113 ntBASIC0.74□□□□□ -2.29
PGK1P00558 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.74□□□□□ -2.29
PGK1P00558 Y_RNA.258-201ENST00000364613 105 ntBASIC0.73□□□□□ -2.29
PGK1P00558 RNU6-1335P-201ENST00000365426 107 ntBASIC0.73□□□□□ -2.29
PGK1P00558 Y_RNA.483-201ENST00000384380 101 ntBASIC0.73□□□□□ -2.29
PGK1P00558 MT-TW-201ENST00000387382 68 ntBASIC0.73□□□□□ -2.29
PGK1P00558 Y_RNA.666-201ENST00000516187 112 ntBASIC0.73□□□□□ -2.29
PGK1P00558 RNA5SP330-201ENST00000517096 96 ntBASIC0.73□□□□□ -2.29
PGK1P00558 MIR548AO-201ENST00000579992 96 ntBASIC0.73□□□□□ -2.29
PGK1P00558 MIR4791-201ENST00000607666 84 ntBASIC0.73□□□□□ -2.29
PGK1P00558 AC106800.4-201ENST00000614905 153 ntBASIC0.73□□□□□ -2.29
PGK1P00558 Y_RNA.14-201ENST00000362415 103 ntBASIC0.72□□□□□ -2.29
PGK1P00558 Y_RNA.44-201ENST00000362676 108 ntBASIC0.72□□□□□ -2.29
PGK1P00558 RNA5SP457-201ENST00000363657 124 ntBASIC0.72□□□□□ -2.29
PGK1P00558 RNA5SP499-201ENST00000363982 119 ntBASIC0.72□□□□□ -2.29
PGK1P00558 Y_RNA.229-201ENST00000364347 113 ntBASIC0.72□□□□□ -2.29
PGK1P00558 SNORA63C-201ENST00000364578 129 ntBASIC0.72□□□□□ -2.29
PGK1P00558 RNU6-740P-201ENST00000364734 105 ntBASIC0.72□□□□□ -2.29
PGK1P00558 Y_RNA.494-201ENST00000384432 111 ntBASIC0.72□□□□□ -2.29
PGK1P00558 RNU6-1160P-201ENST00000384546 104 ntBASIC0.72□□□□□ -2.29
PGK1P00558 Y_RNA.537-201ENST00000384626 109 ntBASIC0.72□□□□□ -2.29
PGK1P00558 MIR518F-201ENST00000384973 87 ntBASIC0.72□□□□□ -2.29
PGK1P00558 Y_RNA.587-201ENST00000391210 103 ntBASIC0.72□□□□□ -2.29
PGK1P00558 AC006461.1-201ENST00000412637 326 ntBASIC0.72□□□□□ -2.29
PGK1P00558 RNA5SP255-201ENST00000516370 107 ntBASIC0.72□□□□□ -2.29
PGK1P00558 RNU6-635P-201ENST00000516651 102 ntBASIC0.72□□□□□ -2.29
PGK1P00558 Y_RNA.720-201ENST00000517166 92 ntBASIC0.72□□□□□ -2.29
PGK1P00558 AC036111.3-201ENST00000526389 112 ntBASIC0.72□□□□□ -2.29
PGK1P00558 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
PGK1P00558 RNU6-94P-201ENST00000607728 107 ntBASIC0.72□□□□□ -2.29
PGK1P00558 Y_RNA.802-201ENST00000614892 130 ntBASIC0.72□□□□□ -2.29
PGK1P00558 AC243829.3-201ENST00000622177 108 ntBASIC0.72□□□□□ -2.29
PGK1P00558 MTND1P7-201ENST00000632801 297 ntBASIC0.72□□□□□ -2.29
PGK1P00558 Y_RNA.242-201ENST00000364473 110 ntBASIC0.71□□□□□ -2.3
PGK1P00558 SNORA24-201ENST00000384096 131 ntBASIC0.71□□□□□ -2.3
PGK1P00558 Y_RNA.486-201ENST00000384398 107 ntBASIC0.71□□□□□ -2.3
PGK1P00558 SNORA51.10-201ENST00000384418 136 ntBASIC0.71□□□□□ -2.3
PGK1P00558 MIR100-201ENST00000385259 80 ntBASIC0.71□□□□□ -2.3
PGK1P00558 RNU6-613P-201ENST00000410412 108 ntBASIC0.71□□□□□ -2.3
PGK1P00558 RNU6-938P-201ENST00000411285 103 ntBASIC0.71□□□□□ -2.3
PGK1P00558 AL358176.2-201ENST00000425769 204 ntBASIC0.71□□□□□ -2.3
PGK1P00558 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.71□□□□□ -2.3
PGK1P00558 RNU6-1007P-201ENST00000516586 107 ntBASIC0.71□□□□□ -2.3
PGK1P00558 RNU11-2P-201ENST00000516898 142 ntBASIC0.71□□□□□ -2.3
PGK1P00558 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.71□□□□□ -2.3
PGK1P00558 MIR8062-201ENST00000621515 85 ntBASIC0.71□□□□□ -2.3
PGK1P00558 MIR924-201ENST00000638017 53 ntBASIC0.71□□□□□ -2.3
PGK1P00558 Y_RNA.82-201ENST00000363000 102 ntBASIC0.7□□□□□ -2.3
PGK1P00558 Y_RNA.92-201ENST00000363043 102 ntBASIC0.7□□□□□ -2.3
PGK1P00558 Y_RNA.235-201ENST00000364412 102 ntBASIC0.7□□□□□ -2.3
PGK1P00558 Y_RNA.306-201ENST00000365015 102 ntBASIC0.7□□□□□ -2.3
PGK1P00558 Y_RNA.312-201ENST00000365089 102 ntBASIC0.7□□□□□ -2.3
PGK1P00558 Y_RNA.322-201ENST00000365151 102 ntBASIC0.7□□□□□ -2.3
PGK1P00558 Y_RNA.370-201ENST00000365589 108 ntBASIC0.7□□□□□ -2.3
PGK1P00558 RNU6-713P-201ENST00000384761 107 ntBASIC0.7□□□□□ -2.3
PGK1P00558 MIR605-201ENST00000385078 83 ntBASIC0.7□□□□□ -2.3
PGK1P00558 AL606490.4-201ENST00000423117 127 ntBASIC0.7□□□□□ -2.3
PGK1P00558 Y_RNA.650-201ENST00000459002 102 ntBASIC0.7□□□□□ -2.3
PGK1P00558 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.7□□□□□ -2.3
PGK1P00558 Y_RNA.777-201ENST00000516982 102 ntBASIC0.7□□□□□ -2.3
PGK1P00558 Y_RNA.771-201ENST00000598668 102 ntBASIC0.7□□□□□ -2.3
PGK1P00558 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.7□□□□□ -2.3
PGK1P00558 Y_RNA.789-201ENST00000622480 102 ntBASIC0.7□□□□□ -2.3
PGK1P00558 MIR335-201ENST00000362173 94 ntBASIC0.69□□□□□ -2.3
PGK1P00558 Y_RNA.24-201ENST00000362508 103 ntBASIC0.69□□□□□ -2.3
PGK1P00558 Y_RNA.66-201ENST00000362862 102 ntBASIC0.69□□□□□ -2.3
PGK1P00558 SNORD45.3-201ENST00000363836 72 ntBASIC0.69□□□□□ -2.3
PGK1P00558 snoU2_19.4-201ENST00000364329 80 ntBASIC0.69□□□□□ -2.3
PGK1P00558 Y_RNA.396-201ENST00000383949 103 ntBASIC0.69□□□□□ -2.3
PGK1P00558 RNU6-484P-201ENST00000384016 107 ntBASIC0.69□□□□□ -2.3
PGK1P00558 Y_RNA.461-201ENST00000384263 103 ntBASIC0.69□□□□□ -2.3
PGK1P00558 SNORA8.3-201ENST00000384679 139 ntBASIC0.69□□□□□ -2.3
PGK1P00558 Y_RNA.574-201ENST00000384766 95 ntBASIC0.69□□□□□ -2.3
PGK1P00558 MIR626-201ENST00000385032 94 ntBASIC0.69□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms